Reviewed, UniProtKB/Swiss-Prot Q8KA39 (FLIM_BUCAP)

Names and origin

Protein names

Recommended name:
    Flagellar motor switch protein fliM

Gene names

Name:	fliM
Ordered Locus Names:	BUsg_073

Organism

Buchnera aphidicola subsp. Schizaphis graminum [Complete proteome] [HAMAP]

Taxonomic identifier

98794 [NCBI]

Taxonomic lineage

Bacteria › Proteobacteria › Gammaproteobacteria › Enterobacteriales › Enterobacteriaceae › Buchnera

Protein attributes

Sequence length	311 AA.
Sequence status	Complete.
Sequence processing	The displayed sequence is not processed.
Protein existence	Inferred from homology.

General annotation (Comments)

Function	FliM is one of three proteins (fliG, fliN, fliM) that form a switch complex that is proposed to be located at the base of the basal body. This complex interacts with the cheY and cheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation By similarity.
Subcellular location	Cell membrane; Peripheral membrane protein By similarity. Bacterial flagellum basal body By similarity.
Sequence similarities	Belongs to the fliM family.

Ontologies

Keywords
Biological process	Chemotaxis Flagellar rotation
Cellular component	Bacterial flagellum Cell membrane Membrane
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	chemotaxis Inferred from electronic annotation. Source: UniProtKB-KW ciliary or flagellar motility Inferred from electronic annotation. Source: UniProtKB-KW
Cellular component	bacterial-type flagellum basal body Inferred from electronic annotation. Source: UniProtKB-SubCell extrinsic to membrane Inferred from electronic annotation. Source: UniProtKB-SubCell plasma membrane Inferred from electronic annotation. Source: UniProtKB-KW
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Chain	1 – 311	311	Flagellar motor switch protein fliM		PRO_0000180925

Sequences

	Sequence		Length	Mass (Da)
	Q8KA39-1 [UniParc]. Last modified October 1, 2002. Version 1. Checksum: 457B903DBC08F70A	FASTA	311	36,926
	10 20 30 40 50 60 MLHTMGKSTN LDNEYKIIYK REKNLDRFLD QNEMKKLEKI NKKFIQKIIM IFSSFIKSNI 70 80 90 100 110 120 ELNFYTVKIN SYTNDDKNFK HLYANSLKIE TLEKKSFIFF SPNFLSVFID FLFGGKGNSI 130 140 150 160 170 180 IRMDIKKEIT YTEHVINKKI VGFIIDAYCE SCKDFFYIDI KFLDFNIIKL NKHFFYTNDL 190 200 210 220 230 240 FITNYFSFNL NGIKIFLSIL IPVSIIKEKN KKIINFLDKN IFSKKTILKE NFFIENLSNI 250 260 270 280 290 300 ELDVTVELIP SYISKHTFDN LREGDVITIE DPGKVTVCIE KKPIFLGKHK IFDEKSIIFL 310 EKFLHQNLEK K

References

[1]

"50 million years of genomic stasis in endosymbiotic bacteria." Tamas I., Klasson L., Canbaeck B., Naeslund A.K., Eriksson A.-S., Wernegreen J.J., Sandstroem J.P., Moran N.A., Andersson S.G.E. Science 296:2376-2379(2002) [PubMed: 12089438] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases
EMBLGenBankDDBJ	AE013218 Genomic DNA. Translation: AAM67643.1.
RefSeq	NP_660432.1.
3D structure databases
ModBase	Search...
Genome annotation databases
GeneID	1005889.
GenomeReviews	Gene locus BUsg_073 in contig AE013218_GR.
KEGG	bas:BUsg073.
Organism-specific databases
CMR	Search...
Phylogenomic databases
HOGENOM	Q8KA39.
OMA	VEVNIIS
Enzyme and pathway databases
BioCyc	BAPH198804:BUSG073-MON.
Family and domain databases
InterPro	IPR001543. SpoA. [Graphical view]
Pfam	PF01052. SpoA. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

FLIM_BUCAP

Accession

Primary (citable) accession number: Q8KA39

Entry history

Integrated into UniProtKB/Swiss-Prot:	November 8, 2002
Last sequence update:	October 1, 2002
Last modified:	November 24, 2009
This is version 42 of the entry and version 1 of the sequence. [Complete history]

Entry status

Reviewed (UniProtKB/Swiss-Prot)

Annotation project

HAMAP (High-quality Automated and Manual Annotation of microbial Proteomes)