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Reviewed, UniProtKB/Swiss-Prot Q8KA33 (RL28_BUCAP)

Last modified November 24, 2009. Version 36. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (3) | Third-party data | Customize display text xml rdf/xml gff fasta
Names and origin · Protein attributes · General annotation (Comments) · Ontologies · Sequence annotation (Features) · Sequences · References · Cross-references · Entry information · Relevant documents

Names and origin

Protein namesRecommended name:
    50S ribosomal protein L28
Gene names
Name: rpmB
Ordered Locus Names: BUsg_079
OrganismBuchnera aphidicola subsp. Schizaphis graminum [Complete proteome] [HAMAP]
Taxonomic identifier98794 [NCBI]
Taxonomic lineageBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeBuchnera

Protein attributes

Sequence length78 AA.
Sequence statusComplete.
Sequence processingThe displayed sequence is not processed.
Protein existenceInferred from homology.

General annotation (Comments)

Sequence similarities

Belongs to the ribosomal protein L28P family.

Ontologies

Keywords
   Molecular functionRibonucleoprotein
Ribosomal protein
   Technical termComplete proteome
Gene Ontology (GO)
   Biological processtranslation

Inferred from electronic annotation. Source: HAMAP

   Cellular componentribosome

Inferred from electronic annotation. Source: UniProtKB-KW

   Molecular functionstructural constituent of ribosome

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 787850S ribosomal protein L28 HAMAP MF_00373
PRO_0000178445

Sequences

Sequence LengthMass (Da)Tools
Q8KA33-1 [UniParc].

Last modified October 1, 2002. Version 1.
Checksum: A860F97141574162

FASTA789,306
        10         20         30         40         50         60 
MSRICQVTRK KRMIGNNRSH AMNAKKRQFL PNIQYHRFWI PEEKRFIKLR ISAHGMRCID 

        70 
KKGIELIIQE IGITKNKG 

« Hide

References

[1]"50 million years of genomic stasis in endosymbiotic bacteria."
Tamas I., Klasson L., Canbaeck B., Naeslund A.K., Eriksson A.-S., Wernegreen J.J., Sandstroem J.P., Moran N.A., Andersson S.G.E.
Science 296:2376-2379(2002) [PubMed: 12089438] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases

AE013218 Genomic DNA. Translation: AAM67649.1.
RefSeqNP_660438.1.

3D structure databases

ModBaseSearch...

Genome annotation databases

GeneID1005896.
GenomeReviewsGene locus BUsg_079 in contig AE013218_GR.
KEGGbas:BUsg079.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMQ8KA33.
OMAPNIHSHR

Enzyme and pathway databases

BioCycBAPH198804:BUSG079-MON.

Family and domain databases

HAMAPMF_00373.
[Tree]
InterProIPR001383. Ribosomal_L28.
[Graphical view]
PfamPF00830. Ribosomal_L28. 1 hit.
[Graphical view]
TIGRFAMsTIGR00009. L28. 1 hit.
ProtoNetSearch...

Entry information

Entry nameRL28_BUCAP
AccessionPrimary (citable) accession number: Q8KA33
Entry history
Integrated into UniProtKB/Swiss-Prot: November 8, 2002
Last sequence update: October 1, 2002
Last modified: November 24, 2009
This is version 36 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation projectHAMAP (High-quality Automated and Manual Annotation of microbial Proteomes)

Relevant documents

Buchnera aphidicola (subsp. Schizaphis graminum)

Buchnera aphidicola (subsp. Schizaphis graminum): entries and gene names

Ribosomal proteins

Ribosomal proteins families and list of entries

SIMILARITY comments

Index of protein domains and families

Names and origin · Protein attributes · General annotation (Comments) · Ontologies · Sequence annotation (Features) · Sequences · References · Cross-references · Entry information · Relevant documents