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Protein

UPF0092 membrane protein BUsg_126

Gene

BUsg_126

Organism
Buchnera aphidicola subsp. Schizaphis graminum (strain Sg)
Status
Reviewed-Annotation score: Annotation score: 1 out of 5-Protein inferred from homologyi

Functioni

Enzyme and pathway databases

BioCyciBAPH198804:GHMG-136-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
UPF0092 membrane protein BUsg_126
Gene namesi
Ordered Locus Names:BUsg_126
OrganismiBuchnera aphidicola subsp. Schizaphis graminum (strain Sg)
Taxonomic identifieri198804 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeBuchnera
ProteomesiUP000000416 Componenti: Chromosome

Subcellular locationi

Topology

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Transmembranei20 – 4021HelicalSequence analysisAdd
BLAST

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Cell membrane, Membrane

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 110110UPF0092 membrane protein BUsg_126PRO_0000097027Add
BLAST

Interactioni

Protein-protein interaction databases

STRINGi198804.BUsg126.

Structurei

3D structure databases

ProteinModelPortaliQ8KA08.
SMRiQ8KA08. Positions 22-55.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the UPF0092 family.Curated

Keywords - Domaini

Transmembrane, Transmembrane helix

Phylogenomic databases

eggNOGiENOG4105VIE. Bacteria.
COG1862. LUCA.
KOiK03210.
OMAiVIELNAN.
OrthoDBiEOG6WQDDS.

Family and domain databases

InterProiIPR003849. Preprotein_translocase_YajC.
[Graphical view]
PfamiPF02699. YajC. 1 hit.
[Graphical view]
PRINTSiPR01853. YAJCTRNLCASE.
TIGRFAMsiTIGR00739. yajC. 1 hit.

Sequencei

Sequence statusi: Complete.

Q8KA08-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSFFIKDANA AVNQALEGNS YSLIFMLVTF ILIFYFMLFR PQQKKDKEHK
60 70 80 90 100
NLMNSIAPGD EVMTTSGFLG RVKKVTENGY VLLQLNNTTE IFIKKDFIVS
110
SLPKGTLESL
Length:110
Mass (Da):12,491
Last modified:October 1, 2002 - v1
Checksum:i41F380CBE5F47E7C
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE013218 Genomic DNA. Translation: AAM67694.1.
RefSeqiWP_011053661.1. NC_004061.1.

Genome annotation databases

EnsemblBacteriaiAAM67694; AAM67694; BUsg_126.
KEGGibas:BUsg_126.
PATRICi21247033. VBIBucAph100086_0130.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE013218 Genomic DNA. Translation: AAM67694.1.
RefSeqiWP_011053661.1. NC_004061.1.

3D structure databases

ProteinModelPortaliQ8KA08.
SMRiQ8KA08. Positions 22-55.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi198804.BUsg126.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAM67694; AAM67694; BUsg_126.
KEGGibas:BUsg_126.
PATRICi21247033. VBIBucAph100086_0130.

Phylogenomic databases

eggNOGiENOG4105VIE. Bacteria.
COG1862. LUCA.
KOiK03210.
OMAiVIELNAN.
OrthoDBiEOG6WQDDS.

Enzyme and pathway databases

BioCyciBAPH198804:GHMG-136-MONOMER.

Family and domain databases

InterProiIPR003849. Preprotein_translocase_YajC.
[Graphical view]
PfamiPF02699. YajC. 1 hit.
[Graphical view]
PRINTSiPR01853. YAJCTRNLCASE.
TIGRFAMsiTIGR00739. yajC. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: Sg.

Entry informationi

Entry nameiY126_BUCAP
AccessioniPrimary (citable) accession number: Q8KA08
Entry historyi
Integrated into UniProtKB/Swiss-Prot: November 8, 2002
Last sequence update: October 1, 2002
Last modified: December 9, 2015
This is version 83 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome

Documents

  1. Buchnera aphidicola (subsp. Schizaphis graminum)
    Buchnera aphidicola (subsp. Schizaphis graminum): entries and gene names
  2. SIMILARITY comments
    Index of protein domains and families
  3. Uncharacterized protein families (UPF)
    List of uncharacterized protein family (UPF) entries

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.