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Protein

UPF0092 membrane protein BUsg_126

Gene

BUsg_126

Organism
Buchnera aphidicola subsp. Schizaphis graminum (strain Sg)
Status
Reviewed-Annotation score: Annotation score: 1 out of 5-Protein inferred from homologyi

Functioni

Enzyme and pathway databases

BioCyciBAPH198804:GHMG-136-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
UPF0092 membrane protein BUsg_126
Gene namesi
Ordered Locus Names:BUsg_126
OrganismiBuchnera aphidicola subsp. Schizaphis graminum (strain Sg)
Taxonomic identifieri198804 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeBuchnera
ProteomesiUP000000416 Componenti: Chromosome

Subcellular locationi

Topology

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Transmembranei20 – 4021HelicalSequence AnalysisAdd
BLAST

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Cell membrane, Membrane

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 110110UPF0092 membrane protein BUsg_126PRO_0000097027Add
BLAST

Interactioni

Protein-protein interaction databases

STRINGi198804.BUsg126.

Structurei

3D structure databases

ProteinModelPortaliQ8KA08.
SMRiQ8KA08. Positions 22-55.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the UPF0092 family.Curated

Keywords - Domaini

Transmembrane, Transmembrane helix

Phylogenomic databases

eggNOGiCOG1862.
KOiK03210.
OMAiVIELNAN.
OrthoDBiEOG6WQDDS.

Family and domain databases

InterProiIPR003849. Preprotein_translocase_YajC.
[Graphical view]
PfamiPF02699. YajC. 1 hit.
[Graphical view]
PRINTSiPR01853. YAJCTRNLCASE.
TIGRFAMsiTIGR00739. yajC. 1 hit.

Sequencei

Sequence statusi: Complete.

Q8KA08-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSFFIKDANA AVNQALEGNS YSLIFMLVTF ILIFYFMLFR PQQKKDKEHK
60 70 80 90 100
NLMNSIAPGD EVMTTSGFLG RVKKVTENGY VLLQLNNTTE IFIKKDFIVS
110
SLPKGTLESL
Length:110
Mass (Da):12,491
Last modified:October 1, 2002 - v1
Checksum:i41F380CBE5F47E7C
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE013218 Genomic DNA. Translation: AAM67694.1.
RefSeqiNP_660483.1. NC_004061.1.
WP_011053661.1. NC_004061.1.

Genome annotation databases

EnsemblBacteriaiAAM67694; AAM67694; BUsg_126.
KEGGibas:BUsg126.
PATRICi21247033. VBIBucAph100086_0130.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE013218 Genomic DNA. Translation: AAM67694.1.
RefSeqiNP_660483.1. NC_004061.1.
WP_011053661.1. NC_004061.1.

3D structure databases

ProteinModelPortaliQ8KA08.
SMRiQ8KA08. Positions 22-55.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi198804.BUsg126.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAM67694; AAM67694; BUsg_126.
KEGGibas:BUsg126.
PATRICi21247033. VBIBucAph100086_0130.

Phylogenomic databases

eggNOGiCOG1862.
KOiK03210.
OMAiVIELNAN.
OrthoDBiEOG6WQDDS.

Enzyme and pathway databases

BioCyciBAPH198804:GHMG-136-MONOMER.

Family and domain databases

InterProiIPR003849. Preprotein_translocase_YajC.
[Graphical view]
PfamiPF02699. YajC. 1 hit.
[Graphical view]
PRINTSiPR01853. YAJCTRNLCASE.
TIGRFAMsiTIGR00739. yajC. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: Sg.

Entry informationi

Entry nameiY126_BUCAP
AccessioniPrimary (citable) accession number: Q8KA08
Entry historyi
Integrated into UniProtKB/Swiss-Prot: November 8, 2002
Last sequence update: October 1, 2002
Last modified: April 29, 2015
This is version 78 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome

Documents

  1. Buchnera aphidicola (subsp. Schizaphis graminum)
    Buchnera aphidicola (subsp. Schizaphis graminum): entries and gene names
  2. SIMILARITY comments
    Index of protein domains and families
  3. Uncharacterized protein families (UPF)
    List of uncharacterized protein family (UPF) entries

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.