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Q8K9Z0 (RS20_BUCAP) Reviewed, UniProtKB/Swiss-Prot

Last modified February 19, 2014. Version 64. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (3) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
30S ribosomal protein S20
Gene names
Name:rpsT
Ordered Locus Names:BUsg_144
OrganismBuchnera aphidicola subsp. Schizaphis graminum (strain Sg) [Complete proteome] [HAMAP]
Taxonomic identifier198804 [NCBI]
Taxonomic lineageBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeBuchnera

Protein attributes

Sequence length89 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

Binds directly to 16S ribosomal RNA By similarity. HAMAP-Rule MF_00500

Sequence similarities

Belongs to the ribosomal protein S20P family.

Ontologies

Keywords
   LigandRNA-binding
rRNA-binding
   Molecular functionRibonucleoprotein
Ribosomal protein
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processtranslation

Inferred from electronic annotation. Source: UniProtKB-HAMAP

   Cellular_componentribosome

Inferred from electronic annotation. Source: UniProtKB-KW

   Molecular_functionrRNA binding

Inferred from electronic annotation. Source: UniProtKB-HAMAP

structural constituent of ribosome

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 898930S ribosomal protein S20 HAMAP-Rule MF_00500
PRO_0000167935

Sequences

Sequence LengthMass (Da)Tools
Q8K9Z0 [UniParc].

Last modified October 1, 2002. Version 1.
Checksum: D6B36C24F1B86692

FASTA8910,285
        10         20         30         40         50         60 
MANIKSAKKD SIISEERRKK NASQRSKMRT FIKKVRLAIS SGDKEKSYDA FKKMQPIIDK 

        70         80 
YATKGLIHKN KAARYKSILS FKIAKLHKN 

« Hide

References

[1]"50 million years of genomic stasis in endosymbiotic bacteria."
Tamas I., Klasson L., Canbaeck B., Naeslund A.K., Eriksson A.-S., Wernegreen J.J., Sandstroem J.P., Moran N.A., Andersson S.G.E.
Science 296:2376-2379(2002) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: Sg.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AE013218 Genomic DNA. Translation: AAM67712.1.
RefSeqNP_660501.1. NC_004061.1.

3D structure databases

ProteinModelPortalQ8K9Z0.
SMRQ8K9Z0. Positions 3-86.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING198804.BUsg144.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAAM67712; AAM67712; BUsg_144.
GeneID1005961.
KEGGbas:BUsg144.
PATRIC21247069. VBIBucAph100086_0148.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0268.
KOK02968.
OMAMTLANIK.
OrthoDBEOG6HMXNQ.
ProtClustDBPRK00239.

Enzyme and pathway databases

BioCycBAPH198804:GHMG-154-MONOMER.

Family and domain databases

Gene3D1.20.58.110. 1 hit.
HAMAPMF_00500. Ribosomal_S20.
InterProIPR002583. Ribosomal_S20.
[Graphical view]
PfamPF01649. Ribosomal_S20p. 1 hit.
[Graphical view]
ProDomPD004231. Ribosomal_S20. 1 hit.
[Graphical view] [Entries sharing at least one domain]
SUPFAMSSF46992. SSF46992. 1 hit.
TIGRFAMsTIGR00029. S20. 1 hit.
ProtoNetSearch...

Entry information

Entry nameRS20_BUCAP
AccessionPrimary (citable) accession number: Q8K9Z0
Entry history
Integrated into UniProtKB/Swiss-Prot: November 8, 2002
Last sequence update: October 1, 2002
Last modified: February 19, 2014
This is version 64 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Relevant documents

SIMILARITY comments

Index of protein domains and families

Ribosomal proteins

Ribosomal proteins families and list of entries

Buchnera aphidicola (subsp. Schizaphis graminum)

Buchnera aphidicola (subsp. Schizaphis graminum): entries and gene names