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Q8K9X0

- RF1_BUCAP

UniProt

Q8K9X0 - RF1_BUCAP

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Protein
Peptide chain release factor 1
Gene
prfA, BUsg_165
Organism
Buchnera aphidicola subsp. Schizaphis graminum (strain Sg)
Status
Reviewed - Annotation score: 2 out of 5 - Protein inferred from homologyi

Functioni

Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA By similarity.UniRule annotation

GO - Molecular functioni

  1. translation release factor activity, codon specific Source: UniProtKB-HAMAP
Complete GO annotation...

GO - Biological processi

    Complete GO annotation...

    Keywords - Biological processi

    Protein biosynthesis

    Enzyme and pathway databases

    BioCyciBAPH198804:GHMG-174-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Peptide chain release factor 1
    Short name:
    RF-1
    Gene namesi
    Name:prfA
    Ordered Locus Names:BUsg_165
    OrganismiBuchnera aphidicola subsp. Schizaphis graminum (strain Sg)
    Taxonomic identifieri198804 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeBuchnera
    ProteomesiUP000000416: Chromosome

    Subcellular locationi

    Cytoplasm By similarity UniRule annotation

    GO - Cellular componenti

    1. cytoplasm Source: UniProtKB-SubCell
    Complete GO annotation...

    Keywords - Cellular componenti

    Cytoplasm

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Chaini1 – 361361Peptide chain release factor 1UniRule annotation
    PRO_0000177647Add
    BLAST

    Amino acid modifications

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Modified residuei235 – 2351N5-methylglutamine By similarity

    Post-translational modificationi

    Methylated by PrmC. Methylation increases the termination efficiency of RF1 By similarity.UniRule annotation

    Keywords - PTMi

    Methylation

    Interactioni

    Protein-protein interaction databases

    STRINGi198804.BUsg165.

    Structurei

    3D structure databases

    ProteinModelPortaliQ8K9X0.
    SMRiQ8K9X0. Positions 8-353.

    Family & Domainsi

    Sequence similaritiesi

    Phylogenomic databases

    eggNOGiCOG0216.
    KOiK02835.
    OMAiYGQLKFE.
    OrthoDBiEOG6TN48J.

    Family and domain databases

    Gene3Di3.30.160.20. 1 hit.
    HAMAPiMF_00093. Rel_fac_1.
    InterProiIPR014720. dsRNA-bd_dom.
    IPR005139. PCRF.
    IPR000352. Pep_chain_release_fac_I_II.
    IPR004373. PrfA.
    [Graphical view]
    PfamiPF03462. PCRF. 1 hit.
    PF00472. RF-1. 1 hit.
    [Graphical view]
    SMARTiSM00937. PCRF. 1 hit.
    [Graphical view]
    TIGRFAMsiTIGR00019. prfA. 1 hit.
    PROSITEiPS00745. RF_PROK_I. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    Q8K9X0-1 [UniParc]FASTAAdd to Basket

    « Hide

    MNSSIFNKLK SLRNRYEEIE IMLSQKDTIS NQEKFKNLSK EYLQISEIVK    50
    NFIKWEKLET DIKNINLLFN DVEMHDIAQE ELFIVKKQKK KLEEKIKILL 100
    LPVDPNDQHS CFIEIRAATG GDESSIFAGE LFRMYTRYAE NYMWKTEIMS 150
    SSENERGGFK EIIAKVTGKG ACGRLKFESG GHRVQRVPET ESQGRIHTST 200
    CTVAIMPVRP KTKKEEIKVS DLKIDTFRSS GAGGQHVNTT DSAIRITHIP 250
    SGNVVECQDE RSQHKNKAKA LSILSARVYA DKLAKSQKEN SSMRRILLGT 300
    GERSDRNRTY NFAQNRITDH RINLTIYKLN EVLQGKLDLL IDPIMQEYQA 350
    DMLSSLSEFK L 361
    Length:361
    Mass (Da):41,459
    Last modified:October 1, 2002 - v1
    Checksum:i0C69E163BA05D21D
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AE013218 Genomic DNA. Translation: AAM67732.1.
    RefSeqiNP_660521.1. NC_004061.1.
    WP_011053699.1. NC_004061.1.

    Genome annotation databases

    EnsemblBacteriaiAAM67732; AAM67732; BUsg_165.
    GeneIDi1005362.
    KEGGibas:BUsg165.
    PATRICi21247111. VBIBucAph100086_0169.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AE013218 Genomic DNA. Translation: AAM67732.1 .
    RefSeqi NP_660521.1. NC_004061.1.
    WP_011053699.1. NC_004061.1.

    3D structure databases

    ProteinModelPortali Q8K9X0.
    SMRi Q8K9X0. Positions 8-353.
    ModBasei Search...

    Protein-protein interaction databases

    STRINGi 198804.BUsg165.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai AAM67732 ; AAM67732 ; BUsg_165 .
    GeneIDi 1005362.
    KEGGi bas:BUsg165.
    PATRICi 21247111. VBIBucAph100086_0169.

    Phylogenomic databases

    eggNOGi COG0216.
    KOi K02835.
    OMAi YGQLKFE.
    OrthoDBi EOG6TN48J.

    Enzyme and pathway databases

    BioCyci BAPH198804:GHMG-174-MONOMER.

    Family and domain databases

    Gene3Di 3.30.160.20. 1 hit.
    HAMAPi MF_00093. Rel_fac_1.
    InterProi IPR014720. dsRNA-bd_dom.
    IPR005139. PCRF.
    IPR000352. Pep_chain_release_fac_I_II.
    IPR004373. PrfA.
    [Graphical view ]
    Pfami PF03462. PCRF. 1 hit.
    PF00472. RF-1. 1 hit.
    [Graphical view ]
    SMARTi SM00937. PCRF. 1 hit.
    [Graphical view ]
    TIGRFAMsi TIGR00019. prfA. 1 hit.
    PROSITEi PS00745. RF_PROK_I. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: Sg.

    Entry informationi

    Entry nameiRF1_BUCAP
    AccessioniPrimary (citable) accession number: Q8K9X0
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: November 8, 2002
    Last sequence update: October 1, 2002
    Last modified: September 3, 2014
    This is version 78 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programProkaryotic Protein Annotation Program

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome

    Documents

    1. Buchnera aphidicola (subsp. Schizaphis graminum)
      Buchnera aphidicola (subsp. Schizaphis graminum): entries and gene names
    2. SIMILARITY comments
      Index of protein domains and families

    External Data

    Dasty 3

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