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Q8K9V2 (YCHF_BUCAP) Reviewed, UniProtKB/Swiss-Prot

Last modified April 16, 2014. Version 80. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (2) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
Ribosome-binding ATPase YchF
Gene names
Name:ychF
Synonyms:engD
Ordered Locus Names:BUsg_185
OrganismBuchnera aphidicola subsp. Schizaphis graminum (strain Sg) [Complete proteome] [HAMAP]
Taxonomic identifier198804 [NCBI]
Taxonomic lineageBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeBuchnera

Protein attributes

Sequence length362 AA.
Sequence statusComplete.
Sequence processingThe displayed sequence is further processed into a mature form.
Protein existenceInferred from homology

General annotation (Comments)

Function

ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner By similarity. HAMAP-Rule MF_00944

Sequence similarities

Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. YchF/OLA1 subfamily.

Contains 1 OBG-type G (guanine nucleotide-binding) domain.

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Initiator methionine11Removed By similarity
Chain2 – 362361Ribosome-binding ATPase YchF HAMAP-Rule MF_00944
PRO_0000201673

Regions

Domain3 – 255253OBG-type G
Nucleotide binding12 – 176ATP By similarity

Sequences

Sequence LengthMass (Da)Tools
Q8K9V2 [UniParc].

Last modified January 23, 2007. Version 3.
Checksum: 8D5C9E45B109F726

FASTA36241,124
        10         20         30         40         50         60 
MGFKCGIIGL PNVGKSTLFN VLTKGNSAVA NFPFCTIKPN IGIVSVPDNR INNLSKIILP 

        70         80         90        100        110        120 
KKITNAFIEF VDIAGLVKGA SKGEGLGNQF LSNIRDTHAI AHVVRCFKDD NVSHIYNQLQ 

       130        140        150        160        170        180 
PKIDVDIINS ELILADFETC EKSILKLQKK LNFNKKEIEE KLVVLSKCLD HLKKFLMLKT 

       190        200        210        220        230        240 
LELDENEKKI ISYLRFLTLK PTMYIANINE QKESCFFLNE LEKMAKKEGS SVIPINSNLE 

       250        260        270        280        290        300 
LDLIKMNEDE QKYFMKSFNI TNLGLNNIIK SGYKILNLIT FFTAGIKEVR AWAIPNGSTS 

       310        320        330        340        350        360 
LQAADKIHSD FRRGFIRAQI INYLDFIKYK SETKVKEAGK YRSEGKFYQI QDGDIINFLF 


NV 

« Hide

References

[1]"50 million years of genomic stasis in endosymbiotic bacteria."
Tamas I., Klasson L., Canbaeck B., Naeslund A.K., Eriksson A.-S., Wernegreen J.J., Sandstroem J.P., Moran N.A., Andersson S.G.E.
Science 296:2376-2379(2002) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: Sg.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AE013218 Genomic DNA. Translation: AAM67750.1.
RefSeqNP_660539.1. NC_004061.1.

3D structure databases

ProteinModelPortalQ8K9V2.
SMRQ8K9V2. Positions 1-362.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING198804.BUsg185.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAAM67750; AAM67750; BUsg_185.
GeneID1005382.
KEGGbas:BUsg185.
PATRIC21247153. VBIBucAph100086_0190.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0012.
KOK06942.
OMAIHVLRCF.
OrthoDBEOG6NSGJC.
ProtClustDBPRK09601.

Enzyme and pathway databases

BioCycBAPH198804:GHMG-195-MONOMER.

Family and domain databases

Gene3D1.10.150.300. 1 hit.
3.10.20.30. 1 hit.
3.40.50.300. 2 hits.
HAMAPMF_00944. YchF_OLA1_ATPase.
InterProIPR004396. ATPase_YchF/OLA1.
IPR012675. Beta-grasp_dom.
IPR013029. DUF933.
IPR006073. GTP_binding_domain.
IPR027417. P-loop_NTPase.
IPR012676. TGS-like.
IPR023192. TGS-like_dom.
[Graphical view]
PANTHERPTHR23305:SF4. PTHR23305:SF4. 1 hit.
PfamPF01926. MMR_HSR1. 1 hit.
PF06071. YchF-GTPase_C. 1 hit.
[Graphical view]
PIRSFPIRSF006641. CHP00092. 1 hit.
PRINTSPR00326. GTP1OBG.
SUPFAMSSF52540. SSF52540. 1 hit.
SSF81271. SSF81271. 1 hit.
TIGRFAMsTIGR00092. TIGR00092. 1 hit.
PROSITEPS51710. G_OBG. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameYCHF_BUCAP
AccessionPrimary (citable) accession number: Q8K9V2
Entry history
Integrated into UniProtKB/Swiss-Prot: November 15, 2002
Last sequence update: January 23, 2007
Last modified: April 16, 2014
This is version 80 of the entry and version 3 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Relevant documents

SIMILARITY comments

Index of protein domains and families

Buchnera aphidicola (subsp. Schizaphis graminum)

Buchnera aphidicola (subsp. Schizaphis graminum): entries and gene names