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Protein

Ribosome-recycling factor

Gene

frr

Organism
Buchnera aphidicola subsp. Schizaphis graminum (strain Sg)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another.UniRule annotation

GO - Biological processi

Complete GO annotation...

Keywords - Biological processi

Protein biosynthesis

Enzyme and pathway databases

BioCyciBAPH198804:GHMG-238-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Ribosome-recycling factorUniRule annotation
Short name:
RRFUniRule annotation
Alternative name(s):
Ribosome-releasing factorUniRule annotation
Gene namesi
Name:frrUniRule annotation
Ordered Locus Names:BUsg_228
OrganismiBuchnera aphidicola subsp. Schizaphis graminum (strain Sg)
Taxonomic identifieri198804 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeBuchnera
ProteomesiUP000000416 Componenti: Chromosome

Subcellular locationi

  • Cytoplasm UniRule annotation

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Cytoplasm

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 185185Ribosome-recycling factorPRO_0000167429Add
BLAST

Interactioni

Protein-protein interaction databases

STRINGi198804.BUsg228.

Structurei

3D structure databases

ProteinModelPortaliQ8K9S8.
SMRiQ8K9S8. Positions 1-185.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the RRF family.UniRule annotation

Phylogenomic databases

eggNOGiCOG0233.
KOiK02838.
OMAiTPLNQVG.
OrthoDBiEOG6SV5F9.

Family and domain databases

HAMAPiMF_00040. RRF.
InterProiIPR002661. Ribosome_recyc_fac.
IPR023584. Ribosome_recyc_fac_dom.
[Graphical view]
PANTHERiPTHR20982. PTHR20982. 1 hit.
PfamiPF01765. RRF. 1 hit.
[Graphical view]
SUPFAMiSSF55194. SSF55194. 1 hit.
TIGRFAMsiTIGR00496. frr. 1 hit.

Sequencei

Sequence statusi: Complete.

Q8K9S8-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MINDIYIKSN EKMKVCINNF QIQVNNVRTG RASPELLNSI YVEYFGSKVP
60 70 80 90 100
LRQISNVVVE NYHTLKINIF DDSSTSLIKK AILNSNLDLN PILYGKDIIV
110 120 130 140 150
PIPGLTEERR THLIKVIRNN AENARIYIRN IRRDANDKIK NYLKSKIISE
160 170 180
DNEHAAQNKI QTMTDDYIKK IDKILSEKEK DLMKF
Length:185
Mass (Da):21,510
Last modified:October 1, 2002 - v1
Checksum:i8F02DA61F23DA2B7
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE013218 Genomic DNA. Translation: AAM67787.1.
RefSeqiNP_660576.1. NC_004061.1.
WP_011053754.1. NC_004061.1.

Genome annotation databases

EnsemblBacteriaiAAM67787; AAM67787; BUsg_228.
KEGGibas:BUsg228.
PATRICi21247251. VBIBucAph100086_0239.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE013218 Genomic DNA. Translation: AAM67787.1.
RefSeqiNP_660576.1. NC_004061.1.
WP_011053754.1. NC_004061.1.

3D structure databases

ProteinModelPortaliQ8K9S8.
SMRiQ8K9S8. Positions 1-185.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi198804.BUsg228.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAM67787; AAM67787; BUsg_228.
KEGGibas:BUsg228.
PATRICi21247251. VBIBucAph100086_0239.

Phylogenomic databases

eggNOGiCOG0233.
KOiK02838.
OMAiTPLNQVG.
OrthoDBiEOG6SV5F9.

Enzyme and pathway databases

BioCyciBAPH198804:GHMG-238-MONOMER.

Family and domain databases

HAMAPiMF_00040. RRF.
InterProiIPR002661. Ribosome_recyc_fac.
IPR023584. Ribosome_recyc_fac_dom.
[Graphical view]
PANTHERiPTHR20982. PTHR20982. 1 hit.
PfamiPF01765. RRF. 1 hit.
[Graphical view]
SUPFAMiSSF55194. SSF55194. 1 hit.
TIGRFAMsiTIGR00496. frr. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: Sg.

Entry informationi

Entry nameiRRF_BUCAP
AccessioniPrimary (citable) accession number: Q8K9S8
Entry historyi
Integrated into UniProtKB/Swiss-Prot: November 8, 2002
Last sequence update: October 1, 2002
Last modified: May 27, 2015
This is version 73 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome

Documents

  1. Buchnera aphidicola (subsp. Schizaphis graminum)
    Buchnera aphidicola (subsp. Schizaphis graminum): entries and gene names
  2. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.