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Q8K9S8 (RRF_BUCAP) Reviewed, UniProtKB/Swiss-Prot

Last modified February 19, 2014. Version 65. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (2) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
Ribosome-recycling factor

Short name=RRF
Alternative name(s):
Ribosome-releasing factor
Gene names
Name:frr
Ordered Locus Names:BUsg_228
OrganismBuchnera aphidicola subsp. Schizaphis graminum (strain Sg) [Complete proteome] [HAMAP]
Taxonomic identifier198804 [NCBI]
Taxonomic lineageBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeBuchnera

Protein attributes

Sequence length185 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another By similarity. HAMAP-Rule MF_00040

Subcellular location

Cytoplasm By similarity HAMAP-Rule MF_00040.

Sequence similarities

Belongs to the RRF family.

Ontologies

Keywords
   Biological processProtein biosynthesis
   Cellular componentCytoplasm
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processtranslational termination

Inferred from electronic annotation. Source: UniProtKB-HAMAP

   Cellular_componentcytoplasm

Inferred from electronic annotation. Source: UniProtKB-SubCell

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 185185Ribosome-recycling factor HAMAP-Rule MF_00040
PRO_0000167429

Sequences

Sequence LengthMass (Da)Tools
Q8K9S8 [UniParc].

Last modified October 1, 2002. Version 1.
Checksum: 8F02DA61F23DA2B7

FASTA18521,510
        10         20         30         40         50         60 
MINDIYIKSN EKMKVCINNF QIQVNNVRTG RASPELLNSI YVEYFGSKVP LRQISNVVVE 

        70         80         90        100        110        120 
NYHTLKINIF DDSSTSLIKK AILNSNLDLN PILYGKDIIV PIPGLTEERR THLIKVIRNN 

       130        140        150        160        170        180 
AENARIYIRN IRRDANDKIK NYLKSKIISE DNEHAAQNKI QTMTDDYIKK IDKILSEKEK 


DLMKF 

« Hide

References

[1]"50 million years of genomic stasis in endosymbiotic bacteria."
Tamas I., Klasson L., Canbaeck B., Naeslund A.K., Eriksson A.-S., Wernegreen J.J., Sandstroem J.P., Moran N.A., Andersson S.G.E.
Science 296:2376-2379(2002) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: Sg.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AE013218 Genomic DNA. Translation: AAM67787.1.
RefSeqNP_660576.1. NC_004061.1.

3D structure databases

ProteinModelPortalQ8K9S8.
SMRQ8K9S8. Positions 1-185.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING198804.BUsg228.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAAM67787; AAM67787; BUsg_228.
GeneID1005427.
KEGGbas:BUsg228.
PATRIC21247251. VBIBucAph100086_0239.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0233.
KOK02838.
OMAPNNDGKV.
OrthoDBEOG6SV5F9.
ProtClustDBPRK00083.

Enzyme and pathway databases

BioCycBAPH198804:GHMG-238-MONOMER.

Family and domain databases

HAMAPMF_00040. RRF.
InterProIPR002661. Ribosome_recyc_fac.
IPR023584. Ribosome_recyc_fac_dom.
[Graphical view]
PANTHERPTHR20982. PTHR20982. 1 hit.
PfamPF01765. RRF. 1 hit.
[Graphical view]
SUPFAMSSF55194. SSF55194. 1 hit.
TIGRFAMsTIGR00496. frr. 1 hit.
ProtoNetSearch...

Entry information

Entry nameRRF_BUCAP
AccessionPrimary (citable) accession number: Q8K9S8
Entry history
Integrated into UniProtKB/Swiss-Prot: November 8, 2002
Last sequence update: October 1, 2002
Last modified: February 19, 2014
This is version 65 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Relevant documents

SIMILARITY comments

Index of protein domains and families

Buchnera aphidicola (subsp. Schizaphis graminum)

Buchnera aphidicola (subsp. Schizaphis graminum): entries and gene names