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Q8K9S5

- BAMA_BUCAP

UniProt

Q8K9S5 - BAMA_BUCAP

Protein

Outer membrane protein assembly factor BamA

Gene

bamA

Organism
Buchnera aphidicola subsp. Schizaphis graminum (strain Sg)
Status
Reviewed - Annotation score: 2 out of 5- Protein inferred from homologyi
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    • History
      Entry version 73 (01 Oct 2014)
      Sequence version 1 (01 Oct 2002)
      Previous versions | rss
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    Functioni

    Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane.UniRule annotation

    GO - Biological processi

    1. Gram-negative-bacterium-type cell outer membrane assembly Source: UniProtKB-HAMAP
    2. protein insertion into membrane Source: UniProtKB-HAMAP

    Enzyme and pathway databases

    BioCyciBAPH198804:GHMG-241-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Outer membrane protein assembly factor BamAUniRule annotation
    Gene namesi
    Name:bamAUniRule annotation
    Ordered Locus Names:BUsg_231
    OrganismiBuchnera aphidicola subsp. Schizaphis graminum (strain Sg)
    Taxonomic identifieri198804 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeBuchnera
    ProteomesiUP000000416: Chromosome

    Subcellular locationi

    Cell outer membrane UniRule annotation

    GO - Cellular componenti

    1. cell outer membrane Source: UniProtKB-SubCell
    2. integral component of membrane Source: UniProtKB-KW

    Keywords - Cellular componenti

    Cell outer membrane, Membrane

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Signal peptidei1 – 2020UniRule annotationAdd
    BLAST
    Chaini21 – 799779Outer membrane protein assembly factor BamAPRO_0000033475Add
    BLAST

    Interactioni

    Subunit structurei

    Part of the Bam complex.UniRule annotation

    Protein-protein interaction databases

    STRINGi198804.BUsg231.

    Structurei

    3D structure databases

    ProteinModelPortaliQ8K9S5.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the BamA family.UniRule annotation

    Keywords - Domaini

    Signal, Transmembrane, Transmembrane beta strand

    Phylogenomic databases

    eggNOGiCOG4775.
    KOiK07277.
    OMAiFRQFEAS.
    OrthoDBiEOG69KTQX.

    Family and domain databases

    HAMAPiMF_01430. OM_assembly_BamA.
    InterProiIPR000184. Bac_surfAg_D15.
    IPR023707. OM_assembly_BamA.
    IPR010827. Surface_Ag_variable_number.
    [Graphical view]
    PfamiPF01103. Bac_surface_Ag. 1 hit.
    PF07244. Surf_Ag_VNR. 5 hits.
    [Graphical view]
    PIRSFiPIRSF006076. OM_assembly_OMP85. 1 hit.
    TIGRFAMsiTIGR03303. OM_YaeT. 1 hit.

    Sequencei

    Sequence statusi: Complete.

    Sequence processingi: The displayed sequence is further processed into a mature form.

    Q8K9S5-1 [UniParc]FASTAAdd to Basket

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    MLIKTIFIIF LMFFSVNVFS KNVWIIENIQ FKGLKYFSKD EVLKNIFFNI    50
    GSNISENDIK HSIKSLFQTG KFETIKIVHS GKTIIFEIKE RPIISNITFS 100
    GNKIIKDSIL KKYLTELGIK EGNFFNPFLN TVFVKNLKEF YSNVGRYNSD 150
    IKIFKKISSN NKIDLQIFIH ESNLVEINHI KIIGNNHFPR DKILSLFKLK 200
    DCKSWWNFLE KRFYYSQQLE EDLKNLSNFY LNQGYYYFNI HRKKVRFLKD 250
    KNKVNITVYI SEGKKYKISN FFLNGNLLQY YQSIKNFINI HNNEFYNKEK 300
    ITLIVKKIQR FLSEKGYIDP KIIIYPQINF KEKKIILNFN IDIQKRYFVN 350
    KINFRGNELT QDIVLRREMK QIEGEWFNLK LIELGIKSLE KLKFLSDITV 400
    QKEILFNKEN GVDITYTLKE QPTGTLNFGL GYGRDSGLSF NASISQDNLF 450
    GSGNSLKASI IKNDNQKYAD ISIMHPYFID DGTNLDTRIF YNDFKYNINS 500
    FYNIVKTTSG FESDLSFLIN AFNRVNIGFG YTHNGLLNKE EKFFSKNGNK 550
    SSDKFLKTSL VDDFTLNYSL THDTLKYFYF PISGNQTYIS GKNTIPGSDN 600
    KFYKFLFDSE QYIPLEEEKK FIFLTHIRAG IGNSLNKEKL PFYENFHAID 650
    SNNIRGFRAN TIGPKKIYIN SNLEECLGYN KKSIFCESVD SIGGNAMIIS 700
    NLELITPIPL IKTEYSKFLR SSFFLDAGNI WDTRWDKEQN IHFSQFPDYT 750
    ILNNIQASIG ISLQWFSPIG PLVFSYAYPI YKNKNNQLEA FQFNFGKNW 799
    Length:799
    Mass (Da):93,717
    Last modified:October 1, 2002 - v1
    Checksum:i997D17612D061C52
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AE013218 Genomic DNA. Translation: AAM67790.1.
    RefSeqiNP_660579.1. NC_004061.1.
    WP_011053757.1. NC_004061.1.

    Genome annotation databases

    EnsemblBacteriaiAAM67790; AAM67790; BUsg_231.
    GeneIDi1005431.
    KEGGibas:BUsg231.
    PATRICi21247257. VBIBucAph100086_0242.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AE013218 Genomic DNA. Translation: AAM67790.1 .
    RefSeqi NP_660579.1. NC_004061.1.
    WP_011053757.1. NC_004061.1.

    3D structure databases

    ProteinModelPortali Q8K9S5.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 198804.BUsg231.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai AAM67790 ; AAM67790 ; BUsg_231 .
    GeneIDi 1005431.
    KEGGi bas:BUsg231.
    PATRICi 21247257. VBIBucAph100086_0242.

    Phylogenomic databases

    eggNOGi COG4775.
    KOi K07277.
    OMAi FRQFEAS.
    OrthoDBi EOG69KTQX.

    Enzyme and pathway databases

    BioCyci BAPH198804:GHMG-241-MONOMER.

    Family and domain databases

    HAMAPi MF_01430. OM_assembly_BamA.
    InterProi IPR000184. Bac_surfAg_D15.
    IPR023707. OM_assembly_BamA.
    IPR010827. Surface_Ag_variable_number.
    [Graphical view ]
    Pfami PF01103. Bac_surface_Ag. 1 hit.
    PF07244. Surf_Ag_VNR. 5 hits.
    [Graphical view ]
    PIRSFi PIRSF006076. OM_assembly_OMP85. 1 hit.
    TIGRFAMsi TIGR03303. OM_YaeT. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: Sg.

    Entry informationi

    Entry nameiBAMA_BUCAP
    AccessioniPrimary (citable) accession number: Q8K9S5
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: November 15, 2002
    Last sequence update: October 1, 2002
    Last modified: October 1, 2014
    This is version 73 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programProkaryotic Protein Annotation Program

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome

    Documents

    1. Buchnera aphidicola (subsp. Schizaphis graminum)
      Buchnera aphidicola (subsp. Schizaphis graminum): entries and gene names
    2. SIMILARITY comments
      Index of protein domains and families

    External Data

    Dasty 3