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Q8K9R5

- SSRP_BUCAP

UniProt

Q8K9R5 - SSRP_BUCAP

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Protein

SsrA-binding protein

Gene

smpB

Organism
Buchnera aphidicola subsp. Schizaphis graminum (strain Sg)
Status
Reviewed - Annotation score: 2 out of 5- Protein inferred from homologyi

Functioni

Binds specifically to the SsrA RNA (tmRNA) and is required for stable association of SsrA with ribosomes.UniRule annotation

GO - Molecular functioni

  1. RNA binding Source: UniProtKB-KW
Complete GO annotation...

Keywords - Ligandi

RNA-binding

Enzyme and pathway databases

BioCyciBAPH198804:GHMG-259-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
SsrA-binding proteinUniRule annotation
Gene namesi
Name:smpBUniRule annotation
Ordered Locus Names:BUsg_245
OrganismiBuchnera aphidicola subsp. Schizaphis graminum (strain Sg)
Taxonomic identifieri198804 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeBuchnera
ProteomesiUP000000416: Chromosome

Subcellular locationi

Cytoplasm UniRule annotation

GO - Cellular componenti

  1. cytoplasm Source: UniProtKB-KW
Complete GO annotation...

Keywords - Cellular componenti

Cytoplasm

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 163163SsrA-binding proteinPRO_0000102921Add
BLAST

Interactioni

Protein-protein interaction databases

STRINGi198804.BUsg245.

Structurei

3D structure databases

ProteinModelPortaliQ8K9R5.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the SmpB family.UniRule annotation

Phylogenomic databases

eggNOGiCOG0691.
KOiK03664.
OMAiPLKIYIK.
OrthoDBiEOG6HXJ9P.

Family and domain databases

Gene3Di2.40.280.10. 1 hit.
HAMAPiMF_00023. SmpB.
InterProiIPR023620. SmpB.
IPR000037. SsrA-bd_prot.
IPR020081. SsrA-bd_prot_CS.
[Graphical view]
PfamiPF01668. SmpB. 1 hit.
[Graphical view]
ProDomiPD004488. SmpB. 1 hit.
[Graphical view] [Entries sharing at least one domain]
SUPFAMiSSF74982. SSF74982. 1 hit.
TIGRFAMsiTIGR00086. smpB. 1 hit.
PROSITEiPS01317. SSRP. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q8K9R5-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MSYKKKRCLK SSIICKNKKA YYNYFIEEVF QSGLVLMGWE VKSIRLGQVN
60 70 80 90 100
IIESYINNDN LNEMYLYNSI VQPLHTSSNY VSCDSSRKRK LLLHKNEIQY
110 120 130 140 150
LCNKKNKIGS TLVALSLFWE KSWCKLNFGL AKGKTKIDKR ASEKQNEWKK
160
EKLKILKKVK FQN
Length:163
Mass (Da):19,246
Last modified:October 1, 2002 - v1
Checksum:i637702F33DF7BA08
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AE013218 Genomic DNA. Translation: AAM67804.1.
RefSeqiNP_660593.1. NC_004061.1.
WP_011053771.1. NC_004061.1.

Genome annotation databases

EnsemblBacteriaiAAM67804; AAM67804; BUsg_245.
GeneIDi1005446.
KEGGibas:BUsg245.
PATRICi21247293. VBIBucAph100086_0256.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AE013218 Genomic DNA. Translation: AAM67804.1 .
RefSeqi NP_660593.1. NC_004061.1.
WP_011053771.1. NC_004061.1.

3D structure databases

ProteinModelPortali Q8K9R5.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 198804.BUsg245.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai AAM67804 ; AAM67804 ; BUsg_245 .
GeneIDi 1005446.
KEGGi bas:BUsg245.
PATRICi 21247293. VBIBucAph100086_0256.

Phylogenomic databases

eggNOGi COG0691.
KOi K03664.
OMAi PLKIYIK.
OrthoDBi EOG6HXJ9P.

Enzyme and pathway databases

BioCyci BAPH198804:GHMG-259-MONOMER.

Family and domain databases

Gene3Di 2.40.280.10. 1 hit.
HAMAPi MF_00023. SmpB.
InterProi IPR023620. SmpB.
IPR000037. SsrA-bd_prot.
IPR020081. SsrA-bd_prot_CS.
[Graphical view ]
Pfami PF01668. SmpB. 1 hit.
[Graphical view ]
ProDomi PD004488. SmpB. 1 hit.
[Graphical view ] [Entries sharing at least one domain ]
SUPFAMi SSF74982. SSF74982. 1 hit.
TIGRFAMsi TIGR00086. smpB. 1 hit.
PROSITEi PS01317. SSRP. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: Sg.

Entry informationi

Entry nameiSSRP_BUCAP
AccessioniPrimary (citable) accession number: Q8K9R5
Entry historyi
Integrated into UniProtKB/Swiss-Prot: November 8, 2002
Last sequence update: October 1, 2002
Last modified: October 29, 2014
This is version 73 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome

Documents

  1. Buchnera aphidicola (subsp. Schizaphis graminum)
    Buchnera aphidicola (subsp. Schizaphis graminum): entries and gene names
  2. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3