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Q8K9R5

- SSRP_BUCAP

UniProt

Q8K9R5 - SSRP_BUCAP

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Protein
SsrA-binding protein
Gene
smpB, BUsg_245
Organism
Buchnera aphidicola subsp. Schizaphis graminum (strain Sg)
Status
Reviewed - Annotation score: 2 out of 5 - Protein inferred from homologyi

Functioni

Binds specifically to the SsrA RNA (tmRNA) and is required for stable association of SsrA with ribosomes By similarity.UniRule annotation

GO - Molecular functioni

  1. RNA binding Source: UniProtKB-KW
Complete GO annotation...

Keywords - Ligandi

RNA-binding

Enzyme and pathway databases

BioCyciBAPH198804:GHMG-259-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
SsrA-binding protein
Gene namesi
Name:smpB
Ordered Locus Names:BUsg_245
OrganismiBuchnera aphidicola subsp. Schizaphis graminum (strain Sg)
Taxonomic identifieri198804 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeBuchnera
ProteomesiUP000000416: Chromosome

Subcellular locationi

Cytoplasm Reviewed prediction UniRule annotation

GO - Cellular componenti

  1. cytoplasm Source: UniProtKB-SubCell
Complete GO annotation...

Keywords - Cellular componenti

Cytoplasm

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 163163SsrA-binding proteinUniRule annotation
PRO_0000102921Add
BLAST

Interactioni

Protein-protein interaction databases

STRINGi198804.BUsg245.

Structurei

3D structure databases

ProteinModelPortaliQ8K9R5.

Family & Domainsi

Sequence similaritiesi

Belongs to the SmpB family.

Phylogenomic databases

eggNOGiCOG0691.
KOiK03664.
OMAiPLKIYIK.
OrthoDBiEOG6HXJ9P.

Family and domain databases

Gene3Di2.40.280.10. 1 hit.
HAMAPiMF_00023. SmpB.
InterProiIPR023620. SmpB.
IPR000037. SsrA-bd_prot.
IPR020081. SsrA-bd_prot_CS.
[Graphical view]
PfamiPF01668. SmpB. 1 hit.
[Graphical view]
ProDomiPD004488. SmpB. 1 hit.
[Graphical view] [Entries sharing at least one domain]
SUPFAMiSSF74982. SSF74982. 1 hit.
TIGRFAMsiTIGR00086. smpB. 1 hit.
PROSITEiPS01317. SSRP. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q8K9R5-1 [UniParc]FASTAAdd to Basket

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MSYKKKRCLK SSIICKNKKA YYNYFIEEVF QSGLVLMGWE VKSIRLGQVN    50
IIESYINNDN LNEMYLYNSI VQPLHTSSNY VSCDSSRKRK LLLHKNEIQY 100
LCNKKNKIGS TLVALSLFWE KSWCKLNFGL AKGKTKIDKR ASEKQNEWKK 150
EKLKILKKVK FQN 163
Length:163
Mass (Da):19,246
Last modified:October 1, 2002 - v1
Checksum:i637702F33DF7BA08
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AE013218 Genomic DNA. Translation: AAM67804.1.
RefSeqiNP_660593.1. NC_004061.1.
WP_011053771.1. NC_004061.1.

Genome annotation databases

EnsemblBacteriaiAAM67804; AAM67804; BUsg_245.
GeneIDi1005446.
KEGGibas:BUsg245.
PATRICi21247293. VBIBucAph100086_0256.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AE013218 Genomic DNA. Translation: AAM67804.1 .
RefSeqi NP_660593.1. NC_004061.1.
WP_011053771.1. NC_004061.1.

3D structure databases

ProteinModelPortali Q8K9R5.
ModBasei Search...

Protein-protein interaction databases

STRINGi 198804.BUsg245.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai AAM67804 ; AAM67804 ; BUsg_245 .
GeneIDi 1005446.
KEGGi bas:BUsg245.
PATRICi 21247293. VBIBucAph100086_0256.

Phylogenomic databases

eggNOGi COG0691.
KOi K03664.
OMAi PLKIYIK.
OrthoDBi EOG6HXJ9P.

Enzyme and pathway databases

BioCyci BAPH198804:GHMG-259-MONOMER.

Family and domain databases

Gene3Di 2.40.280.10. 1 hit.
HAMAPi MF_00023. SmpB.
InterProi IPR023620. SmpB.
IPR000037. SsrA-bd_prot.
IPR020081. SsrA-bd_prot_CS.
[Graphical view ]
Pfami PF01668. SmpB. 1 hit.
[Graphical view ]
ProDomi PD004488. SmpB. 1 hit.
[Graphical view ] [Entries sharing at least one domain ]
SUPFAMi SSF74982. SSF74982. 1 hit.
TIGRFAMsi TIGR00086. smpB. 1 hit.
PROSITEi PS01317. SSRP. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: Sg.

Entry informationi

Entry nameiSSRP_BUCAP
AccessioniPrimary (citable) accession number: Q8K9R5
Entry historyi
Integrated into UniProtKB/Swiss-Prot: November 8, 2002
Last sequence update: October 1, 2002
Last modified: September 3, 2014
This is version 71 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome

Documents

  1. Buchnera aphidicola (subsp. Schizaphis graminum)
    Buchnera aphidicola (subsp. Schizaphis graminum): entries and gene names
  2. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3

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