Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein

Lipoprotein-releasing system transmembrane protein LolC

Gene

lolC

Organism
Buchnera aphidicola subsp. Schizaphis graminum (strain Sg)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Part of an ATP-dependent transport system responsible for the release of lipoproteins targeted to the outer membrane from the inner membrane. Such a release is dependent of the sorting-signal (absence of an Asp at position 2 of the mature lipoprotein) and of LolA (By similarity).By similarity

GO - Biological processi

  1. transport Source: UniProtKB-KW
Complete GO annotation...

Keywords - Biological processi

Transport

Enzyme and pathway databases

BioCyciBAPH198804:GHMG-298-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Lipoprotein-releasing system transmembrane protein LolC
Gene namesi
Name:lolC
Ordered Locus Names:BUsg_284
OrganismiBuchnera aphidicola subsp. Schizaphis graminum (strain Sg)
Taxonomic identifieri198804 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeBuchnera
ProteomesiUP000000416: Chromosome

Subcellular locationi

Cell membrane By similarity; Multi-pass membrane protein By similarity

Topology

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Transmembranei25 – 4521HelicalSequence AnalysisAdd
BLAST
Transmembranei266 – 28621HelicalSequence AnalysisAdd
BLAST
Transmembranei312 – 33221HelicalSequence AnalysisAdd
BLAST
Transmembranei358 – 37821HelicalSequence AnalysisAdd
BLAST

GO - Cellular componenti

  1. integral component of membrane Source: UniProtKB-KW
  2. plasma membrane Source: UniProtKB-SubCell
Complete GO annotation...

Keywords - Cellular componenti

Cell membrane, Membrane

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 399399Lipoprotein-releasing system transmembrane protein LolCPRO_0000201809Add
BLAST

Interactioni

Protein-protein interaction databases

STRINGi198804.BUsg284.

Family & Domainsi

Sequence similaritiesi

Keywords - Domaini

Transmembrane, Transmembrane helix

Phylogenomic databases

eggNOGiCOG4591.
KOiK09808.
OMAiYVKHVTF.
OrthoDBiEOG68SVTW.

Family and domain databases

InterProiIPR003838. ABC_permease.
IPR025857. MacB_PCD.
[Graphical view]
PfamiPF02687. FtsX. 1 hit.
PF12704. MacB_PCD. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q8K9N8-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MYKPIYIFIG LRYLWNPYLP NFKKIIIILS ILGIGIGISS TIITISIMNG
60 70 80 90 100
FQNKFKNDIL SFIPHIIITN KNRNINKLNF PKETLKLKNV EEITDFISKK
110 120 130 140 150
VIIENKNEIN IGEIIGINIK NEKNLENYNI KKFLHTLHSR KYNAIIGSEL
160 170 180 190 200
AKKMHVNIND QIKLIVLPIS KKKFLQNDLN IKLFKITGIF STNSEIDEYQ
210 220 230 240 250
ILINKKNALN FLNYNKNYIT GWKIKLKDPF ILNIQKIKKL NKNFIILDWK
260 270 280 290 300
TKKGELFKAM KIEKYIMLFF FILILLVSSF NIVISLTMNV LDKKNNISIF
310 320 330 340 350
QSQGLSRYKI MLIFIILGST ISIVGNSFGT IISIILIFQK DFLNFLIKIF
360 370 380 390
FIDIEIPIEI SLIQILTINI TFIFLTILST LYPIWYAIKS TPSRILSDE
Length:399
Mass (Da):46,486
Last modified:October 1, 2002 - v1
Checksum:iBF4B1BD037EE9BB0
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE013218 Genomic DNA. Translation: AAM67840.1.
RefSeqiNP_660629.1. NC_004061.1.

Genome annotation databases

EnsemblBacteriaiAAM67840; AAM67840; BUsg_284.
GeneIDi1005488.
KEGGibas:BUsg284.
PATRICi21247375. VBIBucAph100086_0297.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE013218 Genomic DNA. Translation: AAM67840.1.
RefSeqiNP_660629.1. NC_004061.1.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi198804.BUsg284.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAM67840; AAM67840; BUsg_284.
GeneIDi1005488.
KEGGibas:BUsg284.
PATRICi21247375. VBIBucAph100086_0297.

Phylogenomic databases

eggNOGiCOG4591.
KOiK09808.
OMAiYVKHVTF.
OrthoDBiEOG68SVTW.

Enzyme and pathway databases

BioCyciBAPH198804:GHMG-298-MONOMER.

Family and domain databases

InterProiIPR003838. ABC_permease.
IPR025857. MacB_PCD.
[Graphical view]
PfamiPF02687. FtsX. 1 hit.
PF12704. MacB_PCD. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: Sg.

Entry informationi

Entry nameiLOLC_BUCAP
AccessioniPrimary (citable) accession number: Q8K9N8
Entry historyi
Integrated into UniProtKB/Swiss-Prot: November 8, 2002
Last sequence update: October 1, 2002
Last modified: February 4, 2015
This is version 72 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome

Documents

  1. Buchnera aphidicola (subsp. Schizaphis graminum)
    Buchnera aphidicola (subsp. Schizaphis graminum): entries and gene names
  2. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.