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Q8K9H4 (RS15_BUCAP) Reviewed, UniProtKB/Swiss-Prot

Last modified June 11, 2014. Version 76. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (3) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
30S ribosomal protein S15
Gene names
Name:rpsO
Ordered Locus Names:BUsg_362
OrganismBuchnera aphidicola subsp. Schizaphis graminum (strain Sg) [Complete proteome] [HAMAP]
Taxonomic identifier198804 [NCBI]
Taxonomic lineageBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeBuchnera

Protein attributes

Sequence length89 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it helps nucleate assembly of the platform of the 30S subunit by binding and bridging several RNA helices of the 16S rRNA By similarity. HAMAP-Rule MF_01343

Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome By similarity. HAMAP-Rule MF_01343

Subunit structure

Part of the 30S ribosomal subunit. Forms a bridge to the 50S subunit in the 70S ribosome, contacting the 23S rRNA By similarity.

Sequence similarities

Belongs to the ribosomal protein S15P family.

Ontologies

Keywords
   LigandRNA-binding
rRNA-binding
   Molecular functionRibonucleoprotein
Ribosomal protein
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processtranslation

Inferred from electronic annotation. Source: UniProtKB-HAMAP

   Cellular_componentribosome

Inferred from electronic annotation. Source: UniProtKB-KW

   Molecular_functionrRNA binding

Inferred from electronic annotation. Source: UniProtKB-HAMAP

structural constituent of ribosome

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 898930S ribosomal protein S15 HAMAP-Rule MF_01343
PRO_0000115404

Sequences

Sequence LengthMass (Da)Tools
Q8K9H4 [UniParc].

Last modified October 1, 2002. Version 1.
Checksum: F2AFE488635DE9E0

FASTA8910,466
        10         20         30         40         50         60 
MSLGIMTIKE TILKYGKNEK NTGKTDVQIA LLTNQINHLQ LHFSQHKKDH CSRRGLLKMV 

        70         80 
SKRRKLLNYL KKKNISCYTK LIESLNLRR 

« Hide

References

[1]"50 million years of genomic stasis in endosymbiotic bacteria."
Tamas I., Klasson L., Canbaeck B., Naeslund A.K., Eriksson A.-S., Wernegreen J.J., Sandstroem J.P., Moran N.A., Andersson S.G.E.
Science 296:2376-2379(2002) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: Sg.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AE013218 Genomic DNA. Translation: AAM67915.1.
RefSeqNP_660704.1. NC_004061.1.

3D structure databases

ProteinModelPortalQ8K9H4.
SMRQ8K9H4. Positions 10-88.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING198804.BUsg362.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAAM67915; AAM67915; BUsg_362.
GeneID1005552.
KEGGbas:BUsg362.
PATRIC21247539. VBIBucAph100086_0376.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0184.
KOK02956.
OMANKQDHHS.
OrthoDBEOG6B368J.

Enzyme and pathway databases

BioCycBAPH198804:GHMG-379-MONOMER.

Family and domain databases

Gene3D1.10.287.10. 1 hit.
HAMAPMF_01343_B. Ribosomal_S15_B.
InterProIPR000589. Ribosomal_S15.
IPR005290. Ribosomal_S15_bac-type.
IPR009068. S15_NS1_RNA-bd.
[Graphical view]
PfamPF00312. Ribosomal_S15. 1 hit.
[Graphical view]
SUPFAMSSF47060. SSF47060. 1 hit.
TIGRFAMsTIGR00952. S15_bact. 1 hit.
PROSITEPS00362. RIBOSOMAL_S15. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameRS15_BUCAP
AccessionPrimary (citable) accession number: Q8K9H4
Entry history
Integrated into UniProtKB/Swiss-Prot: November 8, 2002
Last sequence update: October 1, 2002
Last modified: June 11, 2014
This is version 76 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Relevant documents

SIMILARITY comments

Index of protein domains and families

Ribosomal proteins

Ribosomal proteins families and list of entries

Buchnera aphidicola (subsp. Schizaphis graminum)

Buchnera aphidicola (subsp. Schizaphis graminum): entries and gene names