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Q8K9H2

- RBFA_BUCAP

UniProt

Q8K9H2 - RBFA_BUCAP

Protein

Ribosome-binding factor A

Gene

rbfA

Organism
Buchnera aphidicola subsp. Schizaphis graminum (strain Sg)
Status
Reviewed - Annotation score: 2 out of 5- Protein inferred from homologyi
  1. Functioni

    Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Essential for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA.UniRule annotation

    GO - Biological processi

    1. rRNA processing Source: UniProtKB-HAMAP

    Keywords - Biological processi

    rRNA processing

    Enzyme and pathway databases

    BioCyciBAPH198804:GHMG-381-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Ribosome-binding factor AUniRule annotation
    Gene namesi
    Name:rbfAUniRule annotation
    Ordered Locus Names:BUsg_364
    OrganismiBuchnera aphidicola subsp. Schizaphis graminum (strain Sg)
    Taxonomic identifieri198804 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeBuchnera
    ProteomesiUP000000416: Chromosome

    Subcellular locationi

    Cytoplasm UniRule annotation

    GO - Cellular componenti

    1. cytoplasm Source: UniProtKB-SubCell

    Keywords - Cellular componenti

    Cytoplasm

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Chaini1 – 124124Ribosome-binding factor APRO_0000102635Add
    BLAST

    Interactioni

    Protein-protein interaction databases

    STRINGi198804.BUsg364.

    Structurei

    3D structure databases

    ProteinModelPortaliQ8K9H2.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the RbfA family.UniRule annotation

    Phylogenomic databases

    eggNOGiCOG0858.
    KOiK02834.
    OMAiMNLRIIP.
    OrthoDBiEOG6XQ3TJ.

    Family and domain databases

    Gene3Di3.30.300.20. 1 hit.
    HAMAPiMF_00003. RbfA.
    InterProiIPR015946. KH_dom-like_a/b.
    IPR000238. Ribosome-bd_facA.
    IPR023799. Ribosome-bd_facA_dom.
    IPR020053. Ribosome-bd_factorA_CS.
    [Graphical view]
    PfamiPF02033. RBFA. 1 hit.
    [Graphical view]
    ProDomiPD007327. Rib_bd_factA. 1 hit.
    [Graphical view] [Entries sharing at least one domain]
    SUPFAMiSSF89919. SSF89919. 1 hit.
    TIGRFAMsiTIGR00082. rbfA. 1 hit.
    PROSITEiPS01319. RBFA. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    Q8K9H2-1 [UniParc]FASTAAdd to Basket

    « Hide

    MDKLFNRSFR IAQELQKNIA FIIQHSLKDP RIKTIITVSE VRLSKDLSYA    50
    QVFVSFLETN SNLTVKKVLI LLNRASGYIR KLLCKKMNLR IIPIIVFFHD 100
    DSFFKGNKIS KLLNILTEKN NITL 124
    Length:124
    Mass (Da):14,440
    Last modified:October 1, 2002 - v1
    Checksum:i8ED0A02450BBE696
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AE013218 Genomic DNA. Translation: AAM67917.1.
    RefSeqiNP_660706.1. NC_004061.1.
    WP_011053884.1. NC_004061.1.

    Genome annotation databases

    EnsemblBacteriaiAAM67917; AAM67917; BUsg_364.
    GeneIDi1005793.
    KEGGibas:BUsg364.
    PATRICi21247543. VBIBucAph100086_0378.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AE013218 Genomic DNA. Translation: AAM67917.1 .
    RefSeqi NP_660706.1. NC_004061.1.
    WP_011053884.1. NC_004061.1.

    3D structure databases

    ProteinModelPortali Q8K9H2.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 198804.BUsg364.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai AAM67917 ; AAM67917 ; BUsg_364 .
    GeneIDi 1005793.
    KEGGi bas:BUsg364.
    PATRICi 21247543. VBIBucAph100086_0378.

    Phylogenomic databases

    eggNOGi COG0858.
    KOi K02834.
    OMAi MNLRIIP.
    OrthoDBi EOG6XQ3TJ.

    Enzyme and pathway databases

    BioCyci BAPH198804:GHMG-381-MONOMER.

    Family and domain databases

    Gene3Di 3.30.300.20. 1 hit.
    HAMAPi MF_00003. RbfA.
    InterProi IPR015946. KH_dom-like_a/b.
    IPR000238. Ribosome-bd_facA.
    IPR023799. Ribosome-bd_facA_dom.
    IPR020053. Ribosome-bd_factorA_CS.
    [Graphical view ]
    Pfami PF02033. RBFA. 1 hit.
    [Graphical view ]
    ProDomi PD007327. Rib_bd_factA. 1 hit.
    [Graphical view ] [Entries sharing at least one domain ]
    SUPFAMi SSF89919. SSF89919. 1 hit.
    TIGRFAMsi TIGR00082. rbfA. 1 hit.
    PROSITEi PS01319. RBFA. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: Sg.

    Entry informationi

    Entry nameiRBFA_BUCAP
    AccessioniPrimary (citable) accession number: Q8K9H2
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: November 8, 2002
    Last sequence update: October 1, 2002
    Last modified: October 1, 2014
    This is version 71 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programProkaryotic Protein Annotation Program

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome

    Documents

    1. Buchnera aphidicola (subsp. Schizaphis graminum)
      Buchnera aphidicola (subsp. Schizaphis graminum): entries and gene names
    2. SIMILARITY comments
      Index of protein domains and families

    External Data

    Dasty 3