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Q8K9H2

- RBFA_BUCAP

UniProt

Q8K9H2 - RBFA_BUCAP

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Protein

Ribosome-binding factor A

Gene

rbfA

Organism
Buchnera aphidicola subsp. Schizaphis graminum (strain Sg)
Status
Reviewed - Annotation score: 2 out of 5- Protein inferred from homologyi

Functioni

Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Essential for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA.UniRule annotation

GO - Biological processi

  1. rRNA processing Source: UniProtKB-HAMAP
Complete GO annotation...

Keywords - Biological processi

rRNA processing

Enzyme and pathway databases

BioCyciBAPH198804:GHMG-381-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Ribosome-binding factor AUniRule annotation
Gene namesi
Name:rbfAUniRule annotation
Ordered Locus Names:BUsg_364
OrganismiBuchnera aphidicola subsp. Schizaphis graminum (strain Sg)
Taxonomic identifieri198804 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeBuchnera
ProteomesiUP000000416: Chromosome

Subcellular locationi

Cytoplasm UniRule annotation

GO - Cellular componenti

  1. cytoplasm Source: UniProtKB-HAMAP
Complete GO annotation...

Keywords - Cellular componenti

Cytoplasm

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 124124Ribosome-binding factor APRO_0000102635Add
BLAST

Interactioni

Protein-protein interaction databases

STRINGi198804.BUsg364.

Structurei

3D structure databases

ProteinModelPortaliQ8K9H2.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the RbfA family.UniRule annotation

Phylogenomic databases

eggNOGiCOG0858.
KOiK02834.
OMAiMNLRIIP.
OrthoDBiEOG6XQ3TJ.

Family and domain databases

Gene3Di3.30.300.20. 1 hit.
HAMAPiMF_00003. RbfA.
InterProiIPR015946. KH_dom-like_a/b.
IPR000238. Ribosome-bd_facA.
IPR023799. Ribosome-bd_facA_dom.
IPR020053. Ribosome-bd_factorA_CS.
[Graphical view]
PfamiPF02033. RBFA. 1 hit.
[Graphical view]
ProDomiPD007327. Rib_bd_factA. 1 hit.
[Graphical view] [Entries sharing at least one domain]
SUPFAMiSSF89919. SSF89919. 1 hit.
TIGRFAMsiTIGR00082. rbfA. 1 hit.
PROSITEiPS01319. RBFA. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q8K9H2-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MDKLFNRSFR IAQELQKNIA FIIQHSLKDP RIKTIITVSE VRLSKDLSYA
60 70 80 90 100
QVFVSFLETN SNLTVKKVLI LLNRASGYIR KLLCKKMNLR IIPIIVFFHD
110 120
DSFFKGNKIS KLLNILTEKN NITL
Length:124
Mass (Da):14,440
Last modified:October 1, 2002 - v1
Checksum:i8ED0A02450BBE696
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AE013218 Genomic DNA. Translation: AAM67917.1.
RefSeqiNP_660706.1. NC_004061.1.
WP_011053884.1. NC_004061.1.

Genome annotation databases

EnsemblBacteriaiAAM67917; AAM67917; BUsg_364.
GeneIDi1005793.
KEGGibas:BUsg364.
PATRICi21247543. VBIBucAph100086_0378.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AE013218 Genomic DNA. Translation: AAM67917.1 .
RefSeqi NP_660706.1. NC_004061.1.
WP_011053884.1. NC_004061.1.

3D structure databases

ProteinModelPortali Q8K9H2.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 198804.BUsg364.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai AAM67917 ; AAM67917 ; BUsg_364 .
GeneIDi 1005793.
KEGGi bas:BUsg364.
PATRICi 21247543. VBIBucAph100086_0378.

Phylogenomic databases

eggNOGi COG0858.
KOi K02834.
OMAi MNLRIIP.
OrthoDBi EOG6XQ3TJ.

Enzyme and pathway databases

BioCyci BAPH198804:GHMG-381-MONOMER.

Family and domain databases

Gene3Di 3.30.300.20. 1 hit.
HAMAPi MF_00003. RbfA.
InterProi IPR015946. KH_dom-like_a/b.
IPR000238. Ribosome-bd_facA.
IPR023799. Ribosome-bd_facA_dom.
IPR020053. Ribosome-bd_factorA_CS.
[Graphical view ]
Pfami PF02033. RBFA. 1 hit.
[Graphical view ]
ProDomi PD007327. Rib_bd_factA. 1 hit.
[Graphical view ] [Entries sharing at least one domain ]
SUPFAMi SSF89919. SSF89919. 1 hit.
TIGRFAMsi TIGR00082. rbfA. 1 hit.
PROSITEi PS01319. RBFA. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: Sg.

Entry informationi

Entry nameiRBFA_BUCAP
AccessioniPrimary (citable) accession number: Q8K9H2
Entry historyi
Integrated into UniProtKB/Swiss-Prot: November 8, 2002
Last sequence update: October 1, 2002
Last modified: October 29, 2014
This is version 72 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome

Documents

  1. Buchnera aphidicola (subsp. Schizaphis graminum)
    Buchnera aphidicola (subsp. Schizaphis graminum): entries and gene names
  2. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3