Reviewed,
UniProtKB/Swiss-Prot Q8K9E2 (RPIA_BUCAP)
Last modified
November 3, 2009.
Version 41.
History...
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Documents (3) |
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Names and origin · Protein attributes · General annotation (Comments) · Ontologies · Sequence annotation (Features) · Sequences · References · Cross-references · Entry information · Relevant documents
Names and origin
| Protein names | Recommended name: Ribose-5-phosphate isomerase A EC=5.3.1.6 Alternative name(s): Phosphoriboisomerase A Short name=PRI | ||||
| Gene names |
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| Organism | Buchnera aphidicola subsp. Schizaphis graminum [Complete proteome] [HAMAP] | ||||
| Taxonomic identifier | 98794 [NCBI] | ||||
| Taxonomic lineage | Bacteria › Proteobacteria › Gammaproteobacteria › Enterobacteriales › Enterobacteriaceae › Buchnera |
Protein attributes
| Sequence length | 219 AA. |
| Sequence status | Complete. |
| Sequence processing | The displayed sequence is not processed. |
| Protein existence | Inferred from homology. |
General annotation (Comments)
| Catalytic activity | D-ribose 5-phosphate = D-ribulose 5-phosphate. HAMAP MF_00170 |
| Pathway | Carbohydrate degradation; pentose phosphate pathway; D-ribose 5-phosphate from D-ribulose 5-phosphate (non-oxidative stage): step 1/1. HAMAP MF_00170 |
| Sequence similarities | Belongs to the ribose 5-phosphate isomerase family. |
Ontologies
| Keywords | |
|---|---|
| Molecular function | Isomerase |
| Technical term | Complete proteome |
| Gene Ontology (GO) | |
| Biological process | pentose-phosphate shunt, non-oxidative branch Inferred from electronic annotation. Source: HAMAP |
| Molecular function | ribose-5-phosphate isomerase activity Inferred from electronic annotation. Source: HAMAP |
| Complete GO annotation... | |
Sequence annotation (Features)
| Feature key | Position(s) | Length | Description | Graphical view | Feature identifier | ||
Molecule processing | |||||||
|---|---|---|---|---|---|---|---|
| Chain | 1 – 219 | 219 | Ribose-5-phosphate isomerase A HAMAP MF_00170 | PRO_0000158399 | |||
Sequences
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References
| [1] | "50 million years of genomic stasis in endosymbiotic bacteria." Tamas I., Klasson L., Canbaeck B., Naeslund A.K., Eriksson A.-S., Wernegreen J.J., Sandstroem J.P., Moran N.A., Andersson S.G.E. Science 296:2376-2379(2002) [PubMed: 12089438] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. |
Cross-references
Sequence databases | |
|---|---|
| AE013218 Genomic DNA. Translation: AAM67948.1. | |
| RefSeq | NP_660737.1. |
3D structure databases | |
| HSSP | HSSP built from PDB template 1O8B based on UniProtKB P27252. |
| ModBase | Search... |
Genome annotation databases | |
| GeneID | 1005518. |
| GenomeReviews | Gene locus BUsg_397 in contig AE013218_GR. |
| KEGG | bas:BUsg397. |
Organism-specific databases | |
| CMR | Search... |
Phylogenomic databases | |
| HOGENOM | Q8K9E2. |
| OMA | ADKFICI. |
Enzyme and pathway databases | |
| BioCyc | BAPH198804:BUSG397-MON. |
Family and domain databases | |
| HAMAP | MF_00170. [Tree] |
| InterPro | IPR004788. RpiA. [Graphical view] |
| PANTHER | PTHR11934. RpiA. 1 hit. |
| Pfam | PF06026. Rib_5-P_isom_A. 1 hit. [Graphical view] |
| ProDom | PD005813. RpiA. 1 hit. [Graphical view] [Entries sharing at least one domain] |
| TIGRFAMs | TIGR00021. rpiA. 1 hit. |
| ProtoNet | Search... |
Entry information
| Entry name | RPIA_BUCAP | ||||||||
| Accession | Primary (citable) accession number: Q8K9E2 | ||||||||
| Entry history |
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| Entry status | Reviewed (UniProtKB/Swiss-Prot) | ||||||||
| Annotation project | HAMAP (High-quality Automated and Manual Annotation of microbial Proteomes) | ||||||||
Relevant documents
| Buchnera aphidicola (subsp. Schizaphis graminum) Buchnera aphidicola (subsp. Schizaphis graminum): entries and gene names |
| PATHWAY comments Index of metabolic and biosynthesis pathways |
| SIMILARITY comments Index of protein domains and families |

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