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Q8K982 (Y467_BUCAP) Reviewed, UniProtKB/Swiss-Prot

Last modified May 14, 2014. Version 70. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (2) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
Nucleoid-associated protein BUsg_467
Gene names
Ordered Locus Names:BUsg_467
OrganismBuchnera aphidicola subsp. Schizaphis graminum (strain Sg) [Complete proteome] [HAMAP]
Taxonomic identifier198804 [NCBI]
Taxonomic lineageBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeBuchnera

Protein attributes

Sequence length109 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection By similarity. HAMAP-Rule MF_00274

Subunit structure

Homodimer By similarity. HAMAP-Rule MF_00274

Subcellular location

Cytoplasmnucleoid By similarity HAMAP-Rule MF_00274.

Sequence similarities

Belongs to the YbaB/EbfC family.

Ontologies

Keywords
   Cellular componentCytoplasm
   LigandDNA-binding
   Technical termComplete proteome
Gene Ontology (GO)
   Cellular_componentbacterial nucleoid

Inferred from electronic annotation. Source: UniProtKB-HAMAP

cytoplasm

Inferred from electronic annotation. Source: UniProtKB-HAMAP

   Molecular_functionDNA binding

Inferred from electronic annotation. Source: UniProtKB-HAMAP

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 109109Nucleoid-associated protein BUsg_467 HAMAP-Rule MF_00274
PRO_0000170374

Sequences

Sequence LengthMass (Da)Tools
Q8K982 [UniParc].

Last modified October 1, 2002. Version 1.
Checksum: AC4174F2EB54A38D

FASTA10911,866
        10         20         30         40         50         60 
MFTKGGLGNL MKQAQQMQEK MAKVQEEIAK MEVTGEAGAG LVKVTINGAH NCRRVEVDPS 

        70         80         90        100 
LLKDDKDMLE DLAAAAFNDA TRRISEVQKK KMSAISTGMQ LPTGFNIPI 

« Hide

References

[1]"50 million years of genomic stasis in endosymbiotic bacteria."
Tamas I., Klasson L., Canbaeck B., Naeslund A.K., Eriksson A.-S., Wernegreen J.J., Sandstroem J.P., Moran N.A., Andersson S.G.E.
Science 296:2376-2379(2002) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: Sg.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AE013218 Genomic DNA. Translation: AAM68010.1.
RefSeqNP_660799.1. NC_004061.1.

3D structure databases

ProteinModelPortalQ8K982.
SMRQ8K982. Positions 11-104.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING198804.BUsg467.

Proteomic databases

PRIDEQ8K982.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAAM68010; AAM68010; BUsg_467.
GeneID1005698.
KEGGbas:BUsg467.
PATRIC21247790. VBIBucAph100086_0494.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0718.
KOK09747.
OMADSISIEF.
OrthoDBEOG6DVJWP.

Enzyme and pathway databases

BioCycBAPH198804:GHMG-491-MONOMER.

Family and domain databases

Gene3D3.30.1310.10. 1 hit.
HAMAPMF_00274. DNA_YbaB_EbfC.
InterProIPR004401. YbaB.
[Graphical view]
PfamPF02575. YbaB_DNA_bd. 1 hit.
[Graphical view]
PIRSFPIRSF004555. UCP004555. 1 hit.
SUPFAMSSF82607. SSF82607. 1 hit.
TIGRFAMsTIGR00103. DNA_YbaB_EbfC. 1 hit.
ProtoNetSearch...

Entry information

Entry nameY467_BUCAP
AccessionPrimary (citable) accession number: Q8K982
Entry history
Integrated into UniProtKB/Swiss-Prot: November 8, 2002
Last sequence update: October 1, 2002
Last modified: May 14, 2014
This is version 70 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Relevant documents

SIMILARITY comments

Index of protein domains and families

Buchnera aphidicola (subsp. Schizaphis graminum)

Buchnera aphidicola (subsp. Schizaphis graminum): entries and gene names