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Q8K967

- RL30_BUCAP

UniProt

Q8K967 - RL30_BUCAP

Protein

50S ribosomal protein L30

Gene

rpmD

Organism
Buchnera aphidicola subsp. Schizaphis graminum (strain Sg)
Status
Reviewed - Annotation score: 2 out of 5- Protein inferred from homologyi
  1. Functioni

    GO - Molecular functioni

    1. structural constituent of ribosome Source: InterPro

    GO - Biological processi

    1. translation Source: InterPro

    Keywords - Molecular functioni

    Ribonucleoprotein, Ribosomal protein

    Enzyme and pathway databases

    BioCyciBAPH198804:GHMG-515-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    50S ribosomal protein L30UniRule annotation
    Gene namesi
    Name:rpmDUniRule annotation
    Ordered Locus Names:BUsg_487
    OrganismiBuchnera aphidicola subsp. Schizaphis graminum (strain Sg)
    Taxonomic identifieri198804 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeBuchnera
    ProteomesiUP000000416: Chromosome

    Subcellular locationi

    GO - Cellular componenti

    1. large ribosomal subunit Source: InterPro

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Chaini1 – 595950S ribosomal protein L30PRO_0000104587Add
    BLAST

    Proteomic databases

    PRIDEiQ8K967.

    Interactioni

    Subunit structurei

    Part of the 50S ribosomal subunit.UniRule annotation

    Protein-protein interaction databases

    STRINGi198804.BUsg487.

    Structurei

    3D structure databases

    ProteinModelPortaliQ8K967.
    SMRiQ8K967. Positions 2-58.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the ribosomal protein L30P family.UniRule annotation

    Phylogenomic databases

    eggNOGiCOG1841.
    KOiK02907.
    OMAiLEDTACV.
    OrthoDBiEOG6BGP7P.

    Family and domain databases

    Gene3Di3.30.1390.20. 1 hit.
    HAMAPiMF_01371_B. Ribosomal_L30_B.
    InterProiIPR005996. Ribosomal_L30_bac-type.
    IPR016082. Ribosomal_L30_ferredoxin-like.
    [Graphical view]
    PfamiPF00327. Ribosomal_L30. 1 hit.
    [Graphical view]
    PIRSFiPIRSF002211. Ribosomal_L30_bac-type. 1 hit.
    SUPFAMiSSF55129. SSF55129. 1 hit.
    TIGRFAMsiTIGR01308. rpmD_bact. 1 hit.

    Sequencei

    Sequence statusi: Complete.

    Q8K967-1 [UniParc]FASTAAdd to Basket

    « Hide

    MKTIKITQIK SSIGRIPDHK KTLLGLGLRH IGHSVIRQDT PSIRGMIKKI   50
    SYILKIQEE 59
    Length:59
    Mass (Da):6,720
    Last modified:October 1, 2002 - v1
    Checksum:iC2E895A2F3765BD5
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AE013218 Genomic DNA. Translation: AAM68030.1.
    RefSeqiNP_660819.1. NC_004061.1.

    Genome annotation databases

    EnsemblBacteriaiAAM68030; AAM68030; BUsg_487.
    GeneIDi1005682.
    KEGGibas:BUsg487.
    PATRICi21247838. VBIBucAph100086_0514.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AE013218 Genomic DNA. Translation: AAM68030.1 .
    RefSeqi NP_660819.1. NC_004061.1.

    3D structure databases

    ProteinModelPortali Q8K967.
    SMRi Q8K967. Positions 2-58.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 198804.BUsg487.

    Proteomic databases

    PRIDEi Q8K967.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai AAM68030 ; AAM68030 ; BUsg_487 .
    GeneIDi 1005682.
    KEGGi bas:BUsg487.
    PATRICi 21247838. VBIBucAph100086_0514.

    Phylogenomic databases

    eggNOGi COG1841.
    KOi K02907.
    OMAi LEDTACV.
    OrthoDBi EOG6BGP7P.

    Enzyme and pathway databases

    BioCyci BAPH198804:GHMG-515-MONOMER.

    Family and domain databases

    Gene3Di 3.30.1390.20. 1 hit.
    HAMAPi MF_01371_B. Ribosomal_L30_B.
    InterProi IPR005996. Ribosomal_L30_bac-type.
    IPR016082. Ribosomal_L30_ferredoxin-like.
    [Graphical view ]
    Pfami PF00327. Ribosomal_L30. 1 hit.
    [Graphical view ]
    PIRSFi PIRSF002211. Ribosomal_L30_bac-type. 1 hit.
    SUPFAMi SSF55129. SSF55129. 1 hit.
    TIGRFAMsi TIGR01308. rpmD_bact. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: Sg.

    Entry informationi

    Entry nameiRL30_BUCAP
    AccessioniPrimary (citable) accession number: Q8K967
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: November 8, 2002
    Last sequence update: October 1, 2002
    Last modified: October 1, 2014
    This is version 74 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programProkaryotic Protein Annotation Program

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome

    Documents

    1. Buchnera aphidicola (subsp. Schizaphis graminum)
      Buchnera aphidicola (subsp. Schizaphis graminum): entries and gene names
    2. Ribosomal proteins
      Ribosomal proteins families and list of entries
    3. SIMILARITY comments
      Index of protein domains and families

    External Data

    Dasty 3