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Q8K965

- RL18_BUCAP

UniProt

Q8K965 - RL18_BUCAP

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Protein
50S ribosomal protein L18
Gene
rplR, BUsg_489
Organism
Buchnera aphidicola subsp. Schizaphis graminum (strain Sg)
Status
Reviewed - Annotation score: 2 out of 5 - Protein inferred from homologyi

Functioni

This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance By similarity.UniRule annotation

GO - Molecular functioni

  1. rRNA binding Source: UniProtKB-HAMAP
  2. structural constituent of ribosome Source: InterPro
Complete GO annotation...

GO - Biological processi

  1. translation Source: UniProtKB-HAMAP
Complete GO annotation...

Keywords - Molecular functioni

Ribonucleoprotein, Ribosomal protein

Keywords - Ligandi

RNA-binding, rRNA-binding

Enzyme and pathway databases

BioCyciBAPH198804:GHMG-517-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
50S ribosomal protein L18
Gene namesi
Name:rplR
Ordered Locus Names:BUsg_489
OrganismiBuchnera aphidicola subsp. Schizaphis graminum (strain Sg)
Taxonomic identifieri198804 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeBuchnera
ProteomesiUP000000416: Chromosome

Subcellular locationi

GO - Cellular componenti

  1. ribosome Source: UniProtKB-KW
Complete GO annotation...

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 12112150S ribosomal protein L18UniRule annotation
PRO_0000131233Add
BLAST

Interactioni

Subunit structurei

Part of the 50S ribosomal subunit; part of the 5S rRNA/L5/L18/L25 subcomplex. Contacts the 5S and 23S rRNAs By similarity.

Protein-protein interaction databases

STRINGi198804.BUsg489.

Structurei

3D structure databases

ProteinModelPortaliQ8K965.
SMRiQ8K965. Positions 22-121.

Family & Domainsi

Sequence similaritiesi

Phylogenomic databases

eggNOGiCOG0256.
KOiK02881.
OMAiRTNCHIY.
OrthoDBiEOG64NB48.

Family and domain databases

HAMAPiMF_01337_B. Ribosomal_L18_B.
InterProiIPR005484. Ribosomal_L18/L5.
IPR004389. Ribosomal_L18_bac-type.
[Graphical view]
PfamiPF00861. Ribosomal_L18p. 1 hit.
[Graphical view]
TIGRFAMsiTIGR00060. L18_bact. 1 hit.

Sequencei

Sequence statusi: Complete.

Q8K965-1 [UniParc]FASTAAdd to Basket

« Hide

MMFYRNKKII SRTRRLLKAR CKIKSLGAIR LVVHRTSRHM YAQIISSESK    50
VLAFASTLES KIKSDLKYTG NKEAAEIVGK IIAKRALLKG ISNVSFDRSG 100
FKYHGRIKKL ADSARNFGLK F 121
Length:121
Mass (Da):13,777
Last modified:October 1, 2002 - v1
Checksum:i85C448DBC92F17DC
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AE013218 Genomic DNA. Translation: AAM68032.1.
RefSeqiNP_660821.1. NC_004061.1.

Genome annotation databases

EnsemblBacteriaiAAM68032; AAM68032; BUsg_489.
GeneIDi1005680.
KEGGibas:BUsg489.
PATRICi21247842. VBIBucAph100086_0516.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AE013218 Genomic DNA. Translation: AAM68032.1 .
RefSeqi NP_660821.1. NC_004061.1.

3D structure databases

ProteinModelPortali Q8K965.
SMRi Q8K965. Positions 22-121.
ModBasei Search...

Protein-protein interaction databases

STRINGi 198804.BUsg489.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai AAM68032 ; AAM68032 ; BUsg_489 .
GeneIDi 1005680.
KEGGi bas:BUsg489.
PATRICi 21247842. VBIBucAph100086_0516.

Phylogenomic databases

eggNOGi COG0256.
KOi K02881.
OMAi RTNCHIY.
OrthoDBi EOG64NB48.

Enzyme and pathway databases

BioCyci BAPH198804:GHMG-517-MONOMER.

Family and domain databases

HAMAPi MF_01337_B. Ribosomal_L18_B.
InterProi IPR005484. Ribosomal_L18/L5.
IPR004389. Ribosomal_L18_bac-type.
[Graphical view ]
Pfami PF00861. Ribosomal_L18p. 1 hit.
[Graphical view ]
TIGRFAMsi TIGR00060. L18_bact. 1 hit.
ProtoNeti Search...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: Sg.

Entry informationi

Entry nameiRL18_BUCAP
AccessioniPrimary (citable) accession number: Q8K965
Entry historyi
Integrated into UniProtKB/Swiss-Prot: November 8, 2002
Last sequence update: October 1, 2002
Last modified: May 14, 2014
This is version 66 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome

Documents

  1. Buchnera aphidicola (subsp. Schizaphis graminum)
    Buchnera aphidicola (subsp. Schizaphis graminum): entries and gene names
  2. Ribosomal proteins
    Ribosomal proteins families and list of entries
  3. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3

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