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Q8K965

- RL18_BUCAP

UniProt

Q8K965 - RL18_BUCAP

Protein

50S ribosomal protein L18

Gene

rplR

Organism
Buchnera aphidicola subsp. Schizaphis graminum (strain Sg)
Status
Reviewed - Annotation score: 2 out of 5- Protein inferred from homologyi
  1. Functioni

    This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance.UniRule annotation

    GO - Molecular functioni

    1. rRNA binding Source: UniProtKB-HAMAP
    2. structural constituent of ribosome Source: InterPro

    GO - Biological processi

    1. translation Source: UniProtKB-HAMAP

    Keywords - Molecular functioni

    Ribonucleoprotein, Ribosomal protein

    Keywords - Ligandi

    RNA-binding, rRNA-binding

    Enzyme and pathway databases

    BioCyciBAPH198804:GHMG-517-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    50S ribosomal protein L18UniRule annotation
    Gene namesi
    Name:rplRUniRule annotation
    Ordered Locus Names:BUsg_489
    OrganismiBuchnera aphidicola subsp. Schizaphis graminum (strain Sg)
    Taxonomic identifieri198804 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeBuchnera
    ProteomesiUP000000416: Chromosome

    Subcellular locationi

    GO - Cellular componenti

    1. ribosome Source: UniProtKB-KW

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Chaini1 – 12112150S ribosomal protein L18PRO_0000131233Add
    BLAST

    Interactioni

    Subunit structurei

    Part of the 50S ribosomal subunit; part of the 5S rRNA/L5/L18/L25 subcomplex. Contacts the 5S and 23S rRNAs.UniRule annotation

    Protein-protein interaction databases

    STRINGi198804.BUsg489.

    Structurei

    3D structure databases

    ProteinModelPortaliQ8K965.
    SMRiQ8K965. Positions 22-121.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the ribosomal protein L18P family.UniRule annotation

    Phylogenomic databases

    eggNOGiCOG0256.
    KOiK02881.
    OMAiRTNCHIY.
    OrthoDBiEOG64NB48.

    Family and domain databases

    HAMAPiMF_01337_B. Ribosomal_L18_B.
    InterProiIPR005484. Ribosomal_L18/L5.
    IPR004389. Ribosomal_L18_bac-type.
    [Graphical view]
    PfamiPF00861. Ribosomal_L18p. 1 hit.
    [Graphical view]
    TIGRFAMsiTIGR00060. L18_bact. 1 hit.

    Sequencei

    Sequence statusi: Complete.

    Q8K965-1 [UniParc]FASTAAdd to Basket

    « Hide

    MMFYRNKKII SRTRRLLKAR CKIKSLGAIR LVVHRTSRHM YAQIISSESK    50
    VLAFASTLES KIKSDLKYTG NKEAAEIVGK IIAKRALLKG ISNVSFDRSG 100
    FKYHGRIKKL ADSARNFGLK F 121
    Length:121
    Mass (Da):13,777
    Last modified:October 1, 2002 - v1
    Checksum:i85C448DBC92F17DC
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AE013218 Genomic DNA. Translation: AAM68032.1.
    RefSeqiNP_660821.1. NC_004061.1.

    Genome annotation databases

    EnsemblBacteriaiAAM68032; AAM68032; BUsg_489.
    GeneIDi1005680.
    KEGGibas:BUsg489.
    PATRICi21247842. VBIBucAph100086_0516.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AE013218 Genomic DNA. Translation: AAM68032.1 .
    RefSeqi NP_660821.1. NC_004061.1.

    3D structure databases

    ProteinModelPortali Q8K965.
    SMRi Q8K965. Positions 22-121.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 198804.BUsg489.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai AAM68032 ; AAM68032 ; BUsg_489 .
    GeneIDi 1005680.
    KEGGi bas:BUsg489.
    PATRICi 21247842. VBIBucAph100086_0516.

    Phylogenomic databases

    eggNOGi COG0256.
    KOi K02881.
    OMAi RTNCHIY.
    OrthoDBi EOG64NB48.

    Enzyme and pathway databases

    BioCyci BAPH198804:GHMG-517-MONOMER.

    Family and domain databases

    HAMAPi MF_01337_B. Ribosomal_L18_B.
    InterProi IPR005484. Ribosomal_L18/L5.
    IPR004389. Ribosomal_L18_bac-type.
    [Graphical view ]
    Pfami PF00861. Ribosomal_L18p. 1 hit.
    [Graphical view ]
    TIGRFAMsi TIGR00060. L18_bact. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: Sg.

    Entry informationi

    Entry nameiRL18_BUCAP
    AccessioniPrimary (citable) accession number: Q8K965
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: November 8, 2002
    Last sequence update: October 1, 2002
    Last modified: October 1, 2014
    This is version 67 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programProkaryotic Protein Annotation Program

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome

    Documents

    1. Buchnera aphidicola (subsp. Schizaphis graminum)
      Buchnera aphidicola (subsp. Schizaphis graminum): entries and gene names
    2. Ribosomal proteins
      Ribosomal proteins families and list of entries
    3. SIMILARITY comments
      Index of protein domains and families

    External Data

    Dasty 3