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Protein

50S ribosomal protein L18

Gene

rplR

Organism
Buchnera aphidicola subsp. Schizaphis graminum (strain Sg)
Status
Reviewed-Annotation score: -Protein inferred from homologyi

Functioni

This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance.UniRule annotation

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionRibonucleoprotein, Ribosomal protein, RNA-binding, rRNA-binding

Enzyme and pathway databases

BioCyciBAPH198804:G1FZU-519-MONOMER

Names & Taxonomyi

Protein namesi
Recommended name:
50S ribosomal protein L18UniRule annotation
Gene namesi
Name:rplRUniRule annotation
Ordered Locus Names:BUsg_489
OrganismiBuchnera aphidicola subsp. Schizaphis graminum (strain Sg)
Taxonomic identifieri198804 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacteralesErwiniaceaeBuchnera
Proteomesi
  • UP000000416 Componenti: Chromosome

Subcellular locationi

GO - Cellular componenti

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00001312331 – 12150S ribosomal protein L18Add BLAST121

Proteomic databases

PRIDEiQ8K965

Interactioni

Subunit structurei

Part of the 50S ribosomal subunit; part of the 5S rRNA/L5/L18/L25 subcomplex. Contacts the 5S and 23S rRNAs.UniRule annotation

Protein-protein interaction databases

STRINGi198804.BUsg489

Structurei

3D structure databases

ProteinModelPortaliQ8K965
SMRiQ8K965
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the universal ribosomal protein uL18 family.UniRule annotation

Phylogenomic databases

eggNOGiENOG4105K4C Bacteria
COG0256 LUCA
KOiK02881
OMAiYHGRVKS
OrthoDBiPOG091H01SD

Family and domain databases

HAMAPiMF_01337_B Ribosomal_L18_B, 1 hit
InterProiView protein in InterPro
IPR005484 Ribosomal_L18
IPR004389 Ribosomal_L18_bac-type
PANTHERiPTHR12899 PTHR12899, 1 hit
PfamiView protein in Pfam
PF00861 Ribosomal_L18p, 1 hit
TIGRFAMsiTIGR00060 L18_bact, 1 hit

Sequencei

Sequence statusi: Complete.

Q8K965-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MMFYRNKKII SRTRRLLKAR CKIKSLGAIR LVVHRTSRHM YAQIISSESK
60 70 80 90 100
VLAFASTLES KIKSDLKYTG NKEAAEIVGK IIAKRALLKG ISNVSFDRSG
110 120
FKYHGRIKKL ADSARNFGLK F
Length:121
Mass (Da):13,777
Last modified:October 1, 2002 - v1
Checksum:i85C448DBC92F17DC
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE013218 Genomic DNA Translation: AAM68032.1
RefSeqiWP_011053998.1, NC_004061.1

Genome annotation databases

EnsemblBacteriaiAAM68032; AAM68032; BUsg_489
KEGGibas:BUsg_489

Similar proteinsi

Entry informationi

Entry nameiRL18_BUCAP
AccessioniPrimary (citable) accession number: Q8K965
Entry historyiIntegrated into UniProtKB/Swiss-Prot: November 8, 2002
Last sequence update: October 1, 2002
Last modified: May 23, 2018
This is version 88 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome
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Main funding by: National Institutes of Health