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Q8K942 (TSGA_BUCAP) Reviewed, UniProtKB/Swiss-Prot

Last modified May 1, 2013. Version 66. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (2) | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesRecommended name:
Protein TsgA homolog
Gene names
Name:tsgA
Ordered Locus Names:BUsg_516
OrganismBuchnera aphidicola subsp. Schizaphis graminum (strain Sg) [Complete proteome] [HAMAP]
Taxonomic identifier198804 [NCBI]
Taxonomic lineageBacteria › Proteobacteria › Gammaproteobacteria › Enterobacteriales › Enterobacteriaceae › Buchnera ›

Protein attributes

Sequence length387 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Subcellular location

Cell membrane; Multi-pass membrane protein By similarity HAMAP-Rule MF_01044.

Sequence similarities

Belongs to the major facilitator superfamily. TsgA family.

Ontologies

Keywords
   Cellular componentCell membrane
Membrane
   DomainTransmembrane
Transmembrane helix
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processtransmembrane transport

Inferred from electronic annotation. Source: InterPro

   Cellular_componentintegral to membrane

Inferred from electronic annotation. Source: UniProtKB-KW

plasma membrane

Inferred from electronic annotation. Source: UniProtKB-SubCell

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 387387Protein TsgA homolog HAMAP-Rule MF_01044
PRO_0000206492

Regions

Transmembrane11 – 3121Helical; Potential
Transmembrane47 – 6721Helical; Potential
Transmembrane76 – 9621Helical; Potential
Transmembrane101 – 12121Helical; Potential
Transmembrane134 – 15421Helical; Potential
Transmembrane160 – 18021Helical; Potential
Transmembrane205 – 22521Helical; Potential
Transmembrane243 – 26321Helical; Potential
Transmembrane271 – 29121Helical; Potential
Transmembrane299 – 31921Helical; Potential
Transmembrane331 – 35121Helical; Potential
Transmembrane358 – 37821Helical; Potential

Sequences

Sequence LengthMass (Da)Tools
Q8K942 [UniParc].

Last modified October 1, 2002. Version 1.
Checksum: 07C293450E33BBAE

FASTA38744,022
        10         20         30         40         50         60 
MQNINQIKLT WISFFSYAFT GALIVITGMI MGDIADYFNL SVSEMSNIFT FLNAGILISI 

        70         80         90        100        110        120 
FLNSWLIDLI SIKKQLIFGF LFSIIAILGI VFSTSILLFS INIFILGLVS GITMSIGTFI 

       130        140        150        160        170        180 
ITCLYSGEKR GSQLLLTDSF FSMSGMIFPI ISAYLLDRKI LWYWIYVFLG IIYFLIFILT 

       190        200        210        220        230        240 
VKSHFPVSEE KTKNNNEIKN LNINIILLSI SALLYILGQL SFISWVPQYT TEIININIKK 

       250        260        270        280        290        300 
TGVLVSNFWM AYMIGMWCFS FIIKFFNLQR MFIFLTGSSS VLMYCFIYSK SYLALKYTII 

       310        320        330        340        350        360 
SLGFFSSAIY TIIITLASLE TKKPSAKLIN LILFFGTIGT LLTFIITSPI VAKKGLYTTL 

       370        380 
IFSNVLYVIV FFLSCIIFKN SKKKDHC

« Hide

References

[1]"50 million years of genomic stasis in endosymbiotic bacteria."
Tamas I., Klasson L., Canbaeck B., Naeslund A.K., Eriksson A.-S., Wernegreen J.J., Sandstroem J.P., Moran N.A., Andersson S.G.E.
Science 296:2376-2379(2002) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: Sg.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		AE013218 Genomic DNA. Translation: AAM68059.1.
RefSeqNP_660848.1. NC_004061.1.

3D structure databases

ProteinModelPortalQ8K942.
ModBaseSearch...

Protein-protein interaction databases

STRING198804.BUsg516.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAAM68059; AAM68059; BUsg_516.
GeneID1005821.
KEGGbas:BUsg516.
PATRIC21247896. VBIBucAph100086_0543.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0477.
KOK06141.
OMASEMSNIF.
ProtClustDBPRK03699.

Enzyme and pathway databases

BioCycBAPH198804:GHMG-561-MONOMER.

Family and domain databases

HAMAPMF_01044. MFS_TsgA.
InterProIPR011701. MFS.
IPR020846. MFS_dom.
IPR016196. MFS_dom_general_subst_transpt.
IPR023528. MFS_TsgA.
[Graphical view]
PfamPF07690. MFS_1. 1 hit.
[Graphical view]
SUPFAMSSF103473. MFS_gen_substrate_transporter. 1 hit.
PROSITEPS50850. MFS. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameTSGA_BUCAP
AccessionPrimary (citable) accession number: Q8K942
Entry history
Integrated into UniProtKB/Swiss-Prot: November 15, 2002
Last sequence update: October 1, 2002
Last modified: May 1, 2013
This is version 66 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Relevant documents

Buchnera aphidicola (subsp. Schizaphis graminum)

Buchnera aphidicola (subsp. Schizaphis graminum): entries and gene names

SIMILARITY comments

Index of protein domains and families

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