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Protein

Putative N-acetylmuramoyl-L-alanine amidase

Gene

amiB

Organism
Buchnera aphidicola subsp. Schizaphis graminum (strain Sg)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Cell-wall hydrolase involved in septum cleavage during cell division.By similarity

Catalytic activityi

Hydrolyzes the link between N-acetylmuramoyl residues and L-amino acid residues in certain cell-wall glycopeptides.

GO - Molecular functioni

  1. N-acetylmuramoyl-L-alanine amidase activity Source: UniProtKB-EC

GO - Biological processi

  1. cell wall organization Source: UniProtKB-KW
  2. peptidoglycan catabolic process Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

Hydrolase

Keywords - Biological processi

Cell wall biogenesis/degradation

Enzyme and pathway databases

BioCyciBAPH198804:GHMG-587-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Putative N-acetylmuramoyl-L-alanine amidase (EC:3.5.1.28)
Gene namesi
Name:amiB
Ordered Locus Names:BUsg_555
OrganismiBuchnera aphidicola subsp. Schizaphis graminum (strain Sg)
Taxonomic identifieri198804 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeBuchnera
ProteomesiUP000000416: Chromosome

Subcellular locationi

Secreted Curated

GO - Cellular componenti

  1. extracellular region Source: UniProtKB-SubCell
Complete GO annotation...

Keywords - Cellular componenti

Secreted

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 233233Putative N-acetylmuramoyl-L-alanine amidasePRO_0000164422Add
BLAST

Interactioni

Protein-protein interaction databases

STRINGi198804.BUsg555.

Structurei

3D structure databases

ProteinModelPortaliQ8K908.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Phylogenomic databases

eggNOGiCOG0860.
KOiK01448.
OMAiTENSADR.
OrthoDBiEOG6CP3X3.

Family and domain databases

Gene3Di3.40.630.40. 2 hits.
InterProiIPR002508. CW_Hdrlase/autolysin_cat.
[Graphical view]
PfamiPF01520. Amidase_3. 1 hit.
[Graphical view]
SMARTiSM00646. Ami_3. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q8K908-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MIDPGHGGQD PGAINSLGLQ EKKITLKIGI KLKNLLQNSD LFYPVLTRND
60 70 80 90 100
DSYVSLKKRR DFLKNNHVSF LISIHADSSK KRYVSGASIW ITTNDRMHRE
110 120 130 140 150
INNFIKNREE NIYFPKNIQN LIQKNKHDFF LKKTVLDLQF NNFQKMEINL
160 170 180 190 200
SRYIFQQLKK IIKLDKINLN YASLGILSSI NTPSMLIETG FITNFLEEKK
210 220 230
LRTNKYQNKI ANAIYIALKN YFQDRLLSNL RNT
Length:233
Mass (Da):27,259
Last modified:October 1, 2002 - v1
Checksum:i4F492C6C2D5FF31E
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE013218 Genomic DNA. Translation: AAM68093.1.
RefSeqiNP_660882.1. NC_004061.1.
WP_011054059.1. NC_004061.1.

Genome annotation databases

EnsemblBacteriaiAAM68093; AAM68093; BUsg_555.
GeneIDi1005636.
KEGGibas:BUsg555.
PATRICi21247994. VBIBucAph100086_0588.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE013218 Genomic DNA. Translation: AAM68093.1.
RefSeqiNP_660882.1. NC_004061.1.
WP_011054059.1. NC_004061.1.

3D structure databases

ProteinModelPortaliQ8K908.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi198804.BUsg555.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAM68093; AAM68093; BUsg_555.
GeneIDi1005636.
KEGGibas:BUsg555.
PATRICi21247994. VBIBucAph100086_0588.

Phylogenomic databases

eggNOGiCOG0860.
KOiK01448.
OMAiTENSADR.
OrthoDBiEOG6CP3X3.

Enzyme and pathway databases

BioCyciBAPH198804:GHMG-587-MONOMER.

Family and domain databases

Gene3Di3.40.630.40. 2 hits.
InterProiIPR002508. CW_Hdrlase/autolysin_cat.
[Graphical view]
PfamiPF01520. Amidase_3. 1 hit.
[Graphical view]
SMARTiSM00646. Ami_3. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: Sg.

Entry informationi

Entry nameiAMIB_BUCAP
AccessioniPrimary (citable) accession number: Q8K908
Entry historyi
Integrated into UniProtKB/Swiss-Prot: November 8, 2002
Last sequence update: October 1, 2002
Last modified: March 4, 2015
This is version 71 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome

Documents

  1. Buchnera aphidicola (subsp. Schizaphis graminum)
    Buchnera aphidicola (subsp. Schizaphis graminum): entries and gene names
  2. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.