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Unreviewed, UniProtKB/TrEMBL Q8K571 (Q8K571_RAT)

Last modified February 9, 2010. Version 47. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data | Customize display text xml rdf/xml gff fasta
Names and origin · Protein attributes · General annotation (Comments) · Ontologies · Sequences · References · Cross-references · Entry information

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Names and origin

Protein namesSubmitted name:
    ADH-like protein EMBL AAM34269.1
Gene names
Name: Adh1 RGD 2044
OrganismRattus norvegicus (Rat) EMBL AAM34269.1
Taxonomic identifier10116 [NCBI]
Taxonomic lineageEukaryota › Metazoa › Chordata › Craniata › Vertebrata › Euteleostomi › Mammalia › Eutheria › Euarchontoglires › Glires › Rodentia › Sciurognathi › Muroidea › Muridae › Murinae › Rattus

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Protein attributes

Sequence length376 AA.
Sequence statusComplete.
Protein existenceEvidence at transcript level.

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General annotation (Comments)

Cofactor

Zinc By similarity. RuleBase RU000467V1

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Ontologies

Keywords
   LigandMetal-binding RuleBase RU000467V1
Zinc RuleBase RU000467V1
   Molecular functionOxidoreductase RuleBase RU000467V1
Gene Ontology (GO)
   Biological processacetaldehyde biosynthetic process

Inferred from direct assay. Source: RGD

behavioral response to ethanol

Inferred from electronic annotation. Source: Compara

ethanol catabolic process

Inferred from electronic annotation. Source: Compara

ethanol oxidation

Inferred from direct assay. Source: RGD

oxidation reduction

Inferred from electronic annotation. Source: UniProtKB-KW

response to retinoic acid

Inferred from electronic annotation. Source: Compara

response to testosterone stimulus

Inferred from electronic annotation. Source: Compara

retinoic acid metabolic process

Inferred from electronic annotation. Source: Compara

retinol metabolic process

Inferred from electronic annotation. Source: Compara

   Cellular componentcytosol

Inferred from direct assay. Source: RGD

mitochondrion

Inferred from electronic annotation. Source: Compara

soluble fraction

Inferred from direct assay. Source: RGD

   Molecular functionNAD or NADH binding

Inferred from direct assay. Source: RGD

alcohol dehydrogenase (NAD) activity

Inferred from direct assay. Source: RGD

drug binding

Inferred from physical interaction. Source: RGD

ethanol binding

Inferred from direct assay. Source: RGD

protein homodimerization activity

Inferred from electronic annotation. Source: Compara

zinc ion binding

Inferred from electronic annotation. Source: UniProtKB-KW

Complete GO annotation...

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Sequences

Sequence LengthMass (Da)Tools
Q8K571-1 [UniParc].

Last modified October 1, 2002. Version 1.
Checksum: 4B24FE255A771AA8

FASTA37639,717
        10         20         30         40         50         60 
MSTAGKVIKC KAAVLWEPHK PFTIEDIEVA PPKAHEVRIK MVATGVCRSD DHAVSGSLFT 

        70         80         90        100        110        120 
PLPAVLGHEG AGIVESIGEG VTCVKPGDKV IPLFSPQCGK CRICKHPESN LCCQTKNLTQ 

       130        140        150        160        170        180 
PKGALLDGTS RFSCRGKPIH HFISTSTFSQ YTVVDDIAVA KIDAAAPLDK VCLIGCGFST 

       190        200        210        220        230        240 
GYGSAVQVAK VTPGSTCAVF GLEGVGLSVV IGCKTAGAAK IIAVDINKDK FAKAKELGAT 

       250        260        270        280        290        300 
DCINPQDYTK PIQEVLQEMT DGGVDFSFEV IGRLDTMTSA LLSCHSACGV SVIVGVPPSA 

       310        320        330        340        350        360 
QSLSVNPMSL LLGRTWKGAI FGGFKSKDAV PKLVADFMAK KFPLEPLITH VLPFEKINEA 

       370 
FDLLRAGKSI RTVLTF

« Hide

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References

[1]"Cloning and analysis of up-regulated genes in rat liver."
Li Y., Xu C., Zhang Y.
Submitted (MAY-2002) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
+Additional computationally mapped references.

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Cross-references

Sequence databases

EMBL
GenBank
DDBJ		AF508795 mRNA. Translation: AAM34269.1.
IPIIPI00331983.
RefSeqNP_062159.3.
UniGeneRn.40222

3D structure databases

HSSPHSSP built from PDB template 1HT0 based on UniProtKB P00326.
SMRQ8K571. Positions 2-376.
ModBaseSearch...

Protein-protein interaction databases

STRINGQ8K571.

Genome annotation databases

EnsemblENSRNOT00000016346; ENSRNOP00000016346; ENSRNOG00000012464; Rattus norvegicus. [Genome view]
GeneID24172.
KEGGrno:24172.

Organism-specific databases

CTD24172.

Phylogenomic databases

HOVERGENQ8K571.
InParanoidQ8K571.

Gene expression databases

ArrayExpressQ8K571.
GenevestigatorQ8K571.

Family and domain databases

InterProIPR013154. ADH_GroES-like.
IPR002085. ADH_SF_Zn.
IPR013149. ADH_Zn-bd.
IPR002328. ADH_Zn_CS.
IPR011032. GroES-like.
IPR016040. NAD(P)-bd_dom.
[Graphical view]
PANTHERPTHR11695. ADH_Sf_Zn. 1 hit.
PfamPF08240. ADH_N. 1 hit.
PF00107. ADH_zinc_N. 1 hit.
[Graphical view]
PROSITEPS00059. ADH_ZINC. 1 hit.
[Graphical view]
ProtoNetSearch...

Other Resources

NextBio602493.

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Entry information

Entry nameQ8K571_RAT
AccessionPrimary (citable) accession number: Q8K571
Entry history
Integrated into UniProtKB/TrEMBL: October 1, 2002
Last sequence update: October 1, 2002
Last modified: February 9, 2010
This is version 47 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
Names and origin · Protein attributes · General annotation (Comments) · Ontologies · Sequences · References · Cross-references · Entry information