Q8K4J6 (MKL1_MOUSE)
Reviewed,
UniProtKB/Swiss-Prot
Last modified
August 10, 2010.
Version 79.
History...
Names and origin
| Protein names | Recommended name: MKL/myocardin-like protein 1 Alternative name(s): Myocardin-related transcription factor A Short name=MRTF-A Megakaryoblastic leukemia 1 protein homolog Basic SAP coiled-coil transcription activator | ||||
| Gene names |
| ||||
| Organism | Mus musculus (Mouse) | ||||
| Taxonomic identifier | 10090 [NCBI] | ||||
| Taxonomic lineage | Eukaryota › Metazoa › Chordata › Craniata › Vertebrata › Euteleostomi › Mammalia › Eutheria › Euarchontoglires › Glires › Rodentia › Sciurognathi › Muroidea › Muridae › Murinae › Mus |
Protein attributes
| Sequence length | 964 AA. |
| Sequence status | Complete. |
| Protein existence | Evidence at protein level. |
General annotation (Comments)
| Function | Transcriptional coactivator of serum response factor (SRF) with the potential to modulate SRF target genes. Suppresses TNF-induced cell death by inhibiting activation of caspases; its transcriptional activity is indispensable for the antiapoptotic function. It may up-regulate antiapoptotic molecules, which in turn inhibit caspase activation. Ref.5 |
| Subunit structure | Forms with SCAI and SRF a nuclear ternary complex which binds the CArG consensus motif (CArG box) on DNA via SRF. Some authors (Ref.1) have found contradictory results, they could not demonstrate that it forms a complex with the CArG boxes, even in the presence of SRF. Interacts with ACTB; interaction with ACTB prevents interaction with SCAI. Interacts with MKL2. Ref.5 |
| Subcellular location | |
| Tissue specificity | Expressed in heart, brain, spleen, lung, liver, muscle, kidney and testis. |
| Developmental stage | Detected throughout the embryo at 10.5 dpc; higher expression is found at 13.5 dpc in neural mesenchymal cells, skeletal muscle of the tongue, and epithelial cells of the colon and small intestine; at 15.5 dpc, expression in epithelial cells of lung, kidney, bladder, and colon is also detected. |
| Domain | The N-terminal region is required for nuclear localization and the C-terminal region mediates transcriptional activity. |
| Sequence similarities | Contains 3 RPEL repeats. Contains 1 SAP domain. |
Ontologies
| Keywords | |
|---|---|
| Biological process | Transcription Transcription regulation |
| Cellular component | Nucleus |
| Coding sequence diversity | Alternative splicing |
| Domain | Coiled coil Repeat |
| PTM | Phosphoprotein |
| Technical term | 3D-structure |
| Gene Ontology (GO) | |
| Biological process | anti-apoptosis Ref.1 Inferred from direct assay. Source: MGI transcription Ref.1Inferred from direct assay. Source: MGI |
| Cellular component | cytoplasm Inferred from direct assay. Source: MGI nucleus Ref.1Inferred from direct assay. Source: MGI |
| Molecular function | actin monomer binding Ref.5 Inferred from direct assay. Source: UniProtKB nucleic acid bindingInferred from electronic annotation. Source: InterPro transcription coactivator activity Ref.5Inferred from direct assay. Source: UniProtKB |
| Complete GO annotation... | |
Alternative products
| This entry describes 2 isoforms produced by alternative splicing. [Align] [Select] | ||||||
| Isoform 1 (identifier: Q8K4J6-1) This isoform has been chosen as the 'canonical' sequence. All positional information in this entry refers to it. This is also the sequence that appears in the downloadable versions of the entry. | ||||||
| Isoform 2 (identifier: Q8K4J6-2) The sequence of this isoform differs from the canonical sequence as follows: 1-35: Missing. |
Sequence annotation (Features)
| Feature key | Position(s) | Length | Description | Graphical view | Feature identifier | ||||||||
Molecule processing | |||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Chain | 1 – 964 | 964 | MKL/myocardin-like protein 1 | PRO_0000126626 | |||||||||
Regions | |||||||||||||
| Repeat | 15 – 40 | 26 | RPEL 1 | ||||||||||
| Repeat | 59 – 84 | 26 | RPEL 2 | ||||||||||
| Repeat | 103 – 128 | 26 | RPEL 3 | ||||||||||
| Domain | 385 – 419 | 35 | SAP | ||||||||||
| Region | 1 – 291 | 291 | Mediates interaction with SCAI and ACTB | ||||||||||
| Coiled coil | 552 – 600 | 49 | Potential | ||||||||||
| Compositional bias | 299 – 325 | 27 | Gln-rich | ||||||||||
| Compositional bias | 712 – 844 | 133 | Pro-rich | ||||||||||
Amino acid modifications | |||||||||||||
| Modified residue | 41 | 1 | Phosphoserine By similarity | ||||||||||
| Modified residue | 488 | 1 | Phosphothreonine By similarity | ||||||||||
| Modified residue | 492 | 1 | Phosphoserine By similarity | ||||||||||
Natural variations | |||||||||||||
| Alternative sequence | 1 – 35 | 35 | Missing in isoform 2. | VSP_007652 | |||||||||
Experimental info | |||||||||||||
| Sequence conflict | 53 | 1 | E → Q in BAC31809. Ref.3 | ||||||||||
| Sequence conflict | 724 | 1 | S → D in BAC40873. Ref.3 | ||||||||||
| Sequence conflict | 728 | 1 | S → F in AAM94258. Ref.1 | ||||||||||
Secondary structure | |||||||||||||
Helix Strand Turn | |||||||||||||
| Helix | 59 – 66 | 8 | |||||||||||
| Helix | 71 – 76 | 6 | |||||||||||
Sequences
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References
| « Hide 'large scale' references | |
| [1] | "Identification of a novel transcriptional activator, BSAC, by a functional cloning to inhibit tumor necrosis factor-induced cell death." Sasazuki T., Sawada Y., Sakon S., Kitamura T., Kishi T., Okazaki T., Katano M., Tanaka M., Watanabe M., Yagita H., Okumura K., Nakano H. J. Biol. Chem. 277:28853-28860(2002) [PubMed: 12019265] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [MRNA] (ISOFORM 1). Tissue: Spleen. |
| [2] | "Potentiation of serum response factor activity by a family of myocardin-related transcription factors." Wang D.-Z., Li S., Hockemeyer D., Sutherland L., Wang Z., Schratt G., Richardson J.A., Nordheim A., Olson E.N. Proc. Natl. Acad. Sci. U.S.A. 99:14855-14860(2002) [PubMed: 12397177] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [MRNA] (ISOFORM 2). Strain: C57BL/6. |
| [3] | "The transcriptional landscape of the mammalian genome." Carninci P., Kasukawa T., Katayama S., Gough J., Frith M.C., Maeda N., Oyama R., Ravasi T., Lenhard B., Wells C., Kodzius R., Shimokawa K., Bajic V.B., Brenner S.E., Batalov S., Forrest A.R., Zavolan M., Davis M.J. Hayashizaki Y.Science 309:1559-1563(2005) [PubMed: 16141072] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] (ISOFORM 2). Strain: C57BL/6J. Tissue: Brain cortex. |
| [4] | "The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)." The MGC Project Team Genome Res. 14:2121-2127(2004) [PubMed: 15489334] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] (ISOFORM 2). Strain: C57BL/6. Tissue: Brain. |
| [5] | "SCAI acts as a suppressor of cancer cell invasion through the transcriptional control of beta1-integrin." Brandt D.T., Baarlink C., Kitzing T.M., Kremmer E., Ivaska J., Nollau P., Grosse R. Nat. Cell Biol. 11:557-568(2009) [PubMed: 19350017] [Abstract] Cited for: FUNCTION, INTERACTION WITH ACTB; SCAI AND SRF, SUBCELLULAR LOCATION. |
| + | Additional computationally mapped references. |
Cross-references
Sequence databases | |||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| EMBL GenBank DDBJ | AF385582 mRNA. Translation: AAM94258.1. AF532597 mRNA. Translation: AAN33041.1. AK044188 mRNA. Translation: BAC31809.1. AK089416 mRNA. Translation: BAC40873.1. BC050941 mRNA. Translation: AAH50941.1. | ||||||||||||||||||
| IPI | IPI00276393. IPI00331708. | ||||||||||||||||||
| RefSeq | NP_001076005.1. NP_694629.2. | ||||||||||||||||||
| UniGene | Mm.439814. | ||||||||||||||||||
3D structure databases | |||||||||||||||||||
| PDBe RCSB PDB PDBj |
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| ProteinModelPortal | Q8K4J6. | ||||||||||||||||||
| SMR | Q8K4J6. Positions 377-423. | ||||||||||||||||||
| ModBase | Search... | ||||||||||||||||||
Protein-protein interaction databases | |||||||||||||||||||
| STRING | Q8K4J6. | ||||||||||||||||||
PTM databases | |||||||||||||||||||
| PhosphoSite | Q8K4J6. | ||||||||||||||||||
Proteomic databases | |||||||||||||||||||
| PRIDE | Q8K4J6. | ||||||||||||||||||
Genome annotation databases | |||||||||||||||||||
| Ensembl | ENSMUST00000109579; ENSMUSP00000105207; ENSMUSG00000042292; Mus musculus. [Genome view] | ||||||||||||||||||
| GeneID | 223701. | ||||||||||||||||||
| KEGG | mmu:223701. | ||||||||||||||||||
| UCSC | uc007wwc.1. mouse. uc007wwd.1. mouse. | ||||||||||||||||||
Organism-specific databases | |||||||||||||||||||
| CTD | 223701. | ||||||||||||||||||
| MGI | MGI:2384495. Mkl1. | ||||||||||||||||||
Phylogenomic databases | |||||||||||||||||||
| HOGENOM | HBG443837. | ||||||||||||||||||
| HOVERGEN | HBG036493. | ||||||||||||||||||
| InParanoid | Q8K4J6. | ||||||||||||||||||
| OMA | SADFKEP. | ||||||||||||||||||
| PhylomeDB | Q8K4J6. | ||||||||||||||||||
Gene expression databases | |||||||||||||||||||
| ArrayExpress | Q8K4J6. | ||||||||||||||||||
| Bgee | Q8K4J6. | ||||||||||||||||||
| CleanEx | MM_MKL1. | ||||||||||||||||||
| Genevestigator | Q8K4J6. | ||||||||||||||||||
| GermOnline | ENSMUSG00000042292. Mus musculus. | ||||||||||||||||||
Family and domain databases | |||||||||||||||||||
| InterPro | IPR004018. RPEL_repeat. IPR003034. SAP_DNA-bd. [Graphical view] | ||||||||||||||||||
| Pfam | PF02755. RPEL. 3 hits. PF02037. SAP. 1 hit. [Graphical view] | ||||||||||||||||||
| SMART | SM00707. RPEL. 3 hits. SM00513. SAP. 1 hit. [Graphical view] | ||||||||||||||||||
| PROSITE | PS51073. RPEL. 3 hits. PS50800. SAP. 1 hit. [Graphical view] | ||||||||||||||||||
| ProtoNet | Search... | ||||||||||||||||||
Other Resources | |||||||||||||||||||
| NextBio | 376834. | ||||||||||||||||||
| SOURCE | Search... | ||||||||||||||||||
Entry information
| Entry name | MKL1_MOUSE | ||||||||
| Accession | Primary (citable) accession number: Q8K4J6 Secondary accession number(s): Q642U1 | ||||||||
| Entry history |
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| Entry status | Reviewed (UniProtKB/Swiss-Prot) | ||||||||
| Annotation project | HPI (Human Proteome Initiative) | ||||||||
Relevant documents
| MGD cross-references Mouse Genome Database (MGD) cross-references in UniProtKB/Swiss-Prot |
| PDB cross-references Index of Protein Data Bank (PDB) cross-references |
| SIMILARITY comments Index of protein domains and families |

Clusters with


