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Q8K479 (C1QT5_MOUSE) Reviewed, UniProtKB/Swiss-Prot

Last modified September 21, 2011. Version 54. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (2) | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesRecommended name:
Complement C1q tumor necrosis factor-related protein 5
Gene names
Name:C1qtnf5
Synonyms:Ctrp5
OrganismMus musculus (Mouse)
Taxonomic identifier10090 [NCBI]
Taxonomic lineageEukaryota › Metazoa › Chordata › Craniata › Vertebrata › Euteleostomi › Mammalia › Eutheria › Euarchontoglires › Glires › Rodentia › Sciurognathi › Muroidea › Muridae › Murinae › Mus › Mus

Protein attributes

Sequence length243 AA.
Sequence statusComplete.
Sequence processingThe displayed sequence is further processed into a mature form.
Protein existenceEvidence at transcript level

General annotation (Comments)

Subcellular location

Secreted Probable.

Sequence similarities

Contains 1 C1q domain.

Contains 1 collagen-like domain.

Ontologies

Keywords
   Cellular componentSecreted
   DomainCollagen
Signal
   Technical termComplete proteome
Reference proteome
Gene Ontology (GO)
   Cellular componentcollagen

Inferred from electronic annotation. Source: UniProtKB-KW

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Signal peptide1 – 1515 By similarity
Chain16 – 243228Complement C1q tumor necrosis factor-related protein 5
PRO_0000003536

Regions

Domain30 – 9566Collagen-like
Domain99 – 243145C1q

Sequences

Sequence LengthMass (Da)Tools
Q8K479 [UniParc].

Last modified October 1, 2002. Version 1.
Checksum: 9F4D5804349791D9

FASTA24325,437
        10         20         30         40         50         60 
MRPLLALLLL GLVSGSPPLD DNKIPSLCPG QPGLPGTPGH HGSQGLPGRD GRDGRDGAPG 

        70         80         90        100        110        120 
APGEKGEGGR PGLPGPRGEP GPRGEAGPMG AIGPAGECSV PPRSAFSAKR SESRVPPPAD 

       130        140        150        160        170        180 
TPLPFDRVLL NEQGHYDPTT GKFTCQVPGV YYFAVHATVY RASLQFDLVK NGQSIASFFQ 

       190        200        210        220        230        240 
YFGGWPKPAS LSGGAMVRLE PEDQVWVQVG VGDYIGIYAS IKTDSTFSGF LVYSDWHSSP 


VFA

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References

[1]"Mfrp, a gene encoding a frizzled related protein, is mutated in the mouse retinal degeneration 6."
Kameya S., Hawes N.L., Chang B., Heckenlively J.R., Naggert J.K., Nishina P.M.
Hum. Mol. Genet. 11:1879-1886(2002) [PubMed: 12140190] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [MRNA].
Strain: C57BL/6J.
+Additional computationally mapped references.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		AF469650 mRNA. Translation: AAM89217.1.
IPIIPI00170175.
RefSeqNP_001035721.1. NM_001040631.2.
NP_001035722.1. NM_001040632.2.
NP_001177242.1. NM_001190313.1.
NP_001177248.1. NM_001190319.1.
NP_663588.2. NM_145613.4.
UniGeneMm.227110.

3D structure databases

ProteinModelPortalQ8K479.
SMRQ8K479. Positions 28-91, 102-234.
ModBaseSearch...

Protein-protein interaction databases

STRINGQ8K479.

Proteomic databases

PRIDEQ8K479.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblENSMUST00000114815; ENSMUSP00000110463; ENSMUSG00000079592.
ENSMUST00000114816; ENSMUSP00000110464; ENSMUSG00000079592.
ENSMUST00000114818; ENSMUSP00000110466; ENSMUSG00000079592.
GeneID235312.
KEGGmmu:235312.

Organism-specific databases

CTD114902.
MGIMGI:2385958. C1qtnf5.

Phylogenomic databases

HOGENOMHBG444750.
HOVERGENHBG108220.
InParanoidQ8K479.
OMALYYFAVH.
OrthoDBEOG4W6NX2.

Gene expression databases

BgeeQ8K479.
GenevestigatorQ8K479.

Family and domain databases

InterProIPR001073. C1q.
IPR008160. Collagen.
IPR008983. Tumour_necrosis_fac-like.
[Graphical view]
Gene3DG3DSA:2.60.120.40. Tumour_necrosis_fac-like. 1 hit.
PfamPF00386. C1q. 1 hit.
PF01391. Collagen. 1 hit.
[Graphical view]
PRINTSPR00007. COMPLEMNTC1Q.
SMARTSM00110. C1Q. 1 hit.
[Graphical view]
SUPFAMSSF49842. TNF_like. 1 hit.
PROSITEPS50871. C1Q. 1 hit.
[Graphical view]
ProtoNetSearch...

Other

NextBio382581.
SOURCESearch...

Entry information

Entry nameC1QT5_MOUSE
AccessionPrimary (citable) accession number: Q8K479
Entry history
Integrated into UniProtKB/Swiss-Prot: April 26, 2005
Last sequence update: October 1, 2002
Last modified: September 21, 2011
This is version 54 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program

Relevant documents

MGD cross-references

Mouse Genome Database (MGD) cross-references in UniProtKB/Swiss-Prot

SIMILARITY comments

Index of protein domains and families

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