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Q8K3G0 (Q8K3G0_RAT) Unreviewed, UniProtKB/TrEMBL

Last modified April 16, 2014. Version 75. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Name:Tnfsf10 RGD 628734
OrganismRattus norvegicus (Rat) EMBL AAM49797.1
Taxonomic identifier10116 [NCBI]
Taxonomic lineageEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeRattus

Protein attributes

Sequence length287 AA.
Sequence statusComplete.
Protein existenceEvidence at transcript level

Sequences

Sequence LengthMass (Da)Tools
Q8K3G0 [UniParc].

Last modified October 1, 2002. Version 1.
Checksum: CA4F5B5D7C833FEC

FASTA28732,980
        10         20         30         40         50         60 
MASTGNLKGP SFSQHFTMTV ICIVLLQVLL QALTVAVTYM YFNNEVKQLQ DNYSKIGLAC 

        70         80         90        100        110        120 
FSKEDGDFWD STDEGILNRP CLQVKRQLYQ LIEEVTLRTF EKTISTVPEK QLSTPPLPRG 

       130        140        150        160        170        180 
RRPQRVAAHI TGITRRSNLA LIPISKDGKT LGQKIETWES SRRGHSFLNH VHLRNGELVI 

       190        200        210        220        230        240 
QEEGLYYIYS QTYYRFKEAK EASKTVSKDG GRIKQMVQYI YKYTSYPDPI LLMKSARNSC 

       250        260        270        280 
WSREAEYGLY SIYQGGLFEL KENDRIFVSV TNEHLMDLDH EASFFGA 

« Hide

References

[1]"Rattus norvegicus TNF-related apoptosis inducing ligand (TRAIL)."
Mueller A.M., Giegerich G.
Submitted (MAY-2002) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
Strain: DA EMBL AAM49797.1.
+Additional computationally mapped references.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AY115578 mRNA. Translation: AAM49797.1.
RefSeqNP_663714.1. NM_145681.1.
UniGeneRn.83627.

3D structure databases

ProteinModelPortalQ8K3G0.
SMRQ8K3G0. Positions 123-287.
ModBaseSearch...
MobiDBSearch...

PTM databases

PhosphoSiteQ8K3G0.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID246775.
KEGGrno:246775.
UCSCRGD:628734. rat.

Organism-specific databases

CTD8743.
RGD628734. Tnfsf10.

Phylogenomic databases

HOVERGENHBG059007.
InParanoidQ8K3G0.
KOK04721.
PhylomeDBQ8K3G0.

Gene expression databases

GenevestigatorQ8K3G0.

Family and domain databases

Gene3D2.60.120.40. 1 hit.
InterProIPR021184. TNF_CS.
IPR006052. TNF_dom.
IPR017355. TNF_ligand_10/11.
IPR008983. Tumour_necrosis_fac-like_dom.
[Graphical view]
PfamPF00229. TNF. 1 hit.
[Graphical view]
PIRSFPIRSF038013. TNF10_TNF11. 1 hit.
SMARTSM00207. TNF. 1 hit.
[Graphical view]
SUPFAMSSF49842. SSF49842. 1 hit.
PROSITEPS00251. TNF_1. 1 hit.
PS50049. TNF_2. 1 hit.
[Graphical view]
ProtoNetSearch...

Other

NextBio623869.

Entry information

Entry nameQ8K3G0_RAT
AccessionPrimary (citable) accession number: Q8K3G0
Entry history
Integrated into UniProtKB/TrEMBL: October 1, 2002
Last sequence update: October 1, 2002
Last modified: April 16, 2014
This is version 75 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)