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Protein

39S ribosomal protein L47, mitochondrial

Gene

Mrpl47

Organism
Mus musculus (Mouse)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

Ribonucleoprotein, Ribosomal protein

Enzyme and pathway databases

ReactomeiR-MMU-5389840. Mitochondrial translation elongation.
R-MMU-5419276. Mitochondrial translation termination.

Names & Taxonomyi

Protein namesi
Recommended name:
39S ribosomal protein L47, mitochondrial
Short name:
L47mt
Short name:
MRP-L47
Gene namesi
Name:Mrpl47
OrganismiMus musculus (Mouse)
Taxonomic identifieri10090 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeMusMus
Proteomesi
  • UP000000589 Componenti: Chromosome 3

Organism-specific databases

MGIiMGI:1921850. Mrpl47.

Subcellular locationi

GO - Cellular componenti

  • mitochondrial ribosome Source: InterPro
  • mitochondrion Source: MGI
Complete GO annotation...

Keywords - Cellular componenti

Mitochondrion

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini? – 25239S ribosomal protein L47, mitochondrialPRO_0000030568
Transit peptidei1 – ?MitochondrionSequence analysis

Amino acid modifications

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Modified residuei146 – 1461N6-acetyllysineBy similarity

Keywords - PTMi

Acetylation

Proteomic databases

EPDiQ8K2Y7.
MaxQBiQ8K2Y7.
PaxDbiQ8K2Y7.
PRIDEiQ8K2Y7.

PTM databases

iPTMnetiQ8K2Y7.
PhosphoSiteiQ8K2Y7.

Expressioni

Gene expression databases

BgeeiQ8K2Y7.
CleanExiMM_MRPL47.
GenevisibleiQ8K2Y7. MM.

Interactioni

Protein-protein interaction databases

BioGridi216873. 1 interaction.
STRINGi10090.ENSMUSP00000048078.

Structurei

3D structure databases

ProteinModelPortaliQ8K2Y7.
SMRiQ8K2Y7. Positions 66-243.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the ribosomal protein L47em family.Curated

Keywords - Domaini

Transit peptide

Phylogenomic databases

eggNOGiKOG3331. Eukaryota.
ENOG41121MX. LUCA.
GeneTreeiENSGT00390000002837.
HOGENOMiHOG000019703.
HOVERGENiHBG050019.
InParanoidiQ8K2Y7.
KOiK17428.
OMAiAPWTAKQ.
OrthoDBiEOG7MD4QR.
PhylomeDBiQ8K2Y7.
TreeFamiTF314327.

Family and domain databases

InterProiIPR010729. Ribosomal_L47_mit.
[Graphical view]
PANTHERiPTHR21183. PTHR21183. 1 hit.
PfamiPF06984. MRP-L47. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

Q8K2Y7-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MAATSLVGIC RRASAFLKAA CSLVNPKDAA HSGCRSSLSL LHKNTPHVTS
60 70 80 90 100
FLQCKLLHTT LSRKGLEEFF DDPKNWGEEK VKSGASWTCQ QLRNKSNEDL
110 120 130 140 150
HKLWYVLLKE RNMLLTLEQE AKRQRLPMPS PERLEKVVDS MDNVDKVVQE
160 170 180 190 200
REDALRLLQT GQEKPRPGAW RRDIFGRIVW HKFKQWPIPW YLNKRYNRRR
210 220 230 240 250
FFAMPYVDRF IRLRIEKHAR IEARKRSLQK KKEKILHAKF PHLSQERKSS

SV
Length:252
Mass (Da):29,726
Last modified:December 6, 2005 - v2
Checksum:i22218B52088CD9E6
GO

Sequence cautioni

The sequence AAH38065.1 differs from that shown. Reason: Erroneous initiation. Curated

Experimental Info

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Sequence conflicti106 – 1061V → A in AAH87953 (PubMed:15489334).Curated

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BC029173 mRNA. Translation: AAH29173.1.
BC038065 mRNA. Translation: AAH38065.1. Different initiation.
BC087953 mRNA. Translation: AAH87953.1.
CCDSiCCDS17299.1.
RefSeqiNP_083293.1. NM_029017.2.
UniGeneiMm.288960.

Genome annotation databases

EnsembliENSMUST00000043966; ENSMUSP00000048078; ENSMUSG00000037531.
GeneIDi74600.
KEGGimmu:74600.
UCSCiuc008owp.2. mouse.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BC029173 mRNA. Translation: AAH29173.1.
BC038065 mRNA. Translation: AAH38065.1. Different initiation.
BC087953 mRNA. Translation: AAH87953.1.
CCDSiCCDS17299.1.
RefSeqiNP_083293.1. NM_029017.2.
UniGeneiMm.288960.

3D structure databases

ProteinModelPortaliQ8K2Y7.
SMRiQ8K2Y7. Positions 66-243.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

BioGridi216873. 1 interaction.
STRINGi10090.ENSMUSP00000048078.

PTM databases

iPTMnetiQ8K2Y7.
PhosphoSiteiQ8K2Y7.

Proteomic databases

EPDiQ8K2Y7.
MaxQBiQ8K2Y7.
PaxDbiQ8K2Y7.
PRIDEiQ8K2Y7.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENSMUST00000043966; ENSMUSP00000048078; ENSMUSG00000037531.
GeneIDi74600.
KEGGimmu:74600.
UCSCiuc008owp.2. mouse.

Organism-specific databases

CTDi57129.
MGIiMGI:1921850. Mrpl47.

Phylogenomic databases

eggNOGiKOG3331. Eukaryota.
ENOG41121MX. LUCA.
GeneTreeiENSGT00390000002837.
HOGENOMiHOG000019703.
HOVERGENiHBG050019.
InParanoidiQ8K2Y7.
KOiK17428.
OMAiAPWTAKQ.
OrthoDBiEOG7MD4QR.
PhylomeDBiQ8K2Y7.
TreeFamiTF314327.

Enzyme and pathway databases

ReactomeiR-MMU-5389840. Mitochondrial translation elongation.
R-MMU-5419276. Mitochondrial translation termination.

Miscellaneous databases

PROiQ8K2Y7.
SOURCEiSearch...

Gene expression databases

BgeeiQ8K2Y7.
CleanExiMM_MRPL47.
GenevisibleiQ8K2Y7. MM.

Family and domain databases

InterProiIPR010729. Ribosomal_L47_mit.
[Graphical view]
PANTHERiPTHR21183. PTHR21183. 1 hit.
PfamiPF06984. MRP-L47. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)."
    The MGC Project Team
    Genome Res. 14:2121-2127(2004) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
    Strain: FVB/N.
    Tissue: Kidney.
  2. Cited for: IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS].
    Tissue: Brain, Heart, Kidney, Liver, Pancreas and Spleen.

Entry informationi

Entry nameiRM47_MOUSE
AccessioniPrimary (citable) accession number: Q8K2Y7
Secondary accession number(s): Q5I0U2, Q8CHZ6
Entry historyi
Integrated into UniProtKB/Swiss-Prot: April 26, 2004
Last sequence update: December 6, 2005
Last modified: June 8, 2016
This is version 104 of the entry and version 2 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. MGD cross-references
    Mouse Genome Database (MGD) cross-references in UniProtKB/Swiss-Prot
  2. Ribosomal proteins
    Ribosomal proteins families and list of entries
  3. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.