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Q8K2W0

- Q8K2W0_MOUSE

UniProt

Q8K2W0 - Q8K2W0_MOUSE

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Protein
Submitted name: Collagen, type IX, alpha 2
Gene
Col9a2, mCG_13517
Organism
Mus musculus (Mouse)
Status
Unreviewed - Annotation score: 1 out of 5 - Experimental evidence at transcript leveli

Names & Taxonomyi

Protein namesi
Submitted name:
Collagen, type IX, alpha 2Imported
Submitted name:
Procollagen, type IX, alpha 2Imported
Gene namesi
Name:Col9a2Imported
ORF Names:mCG_13517Imported
OrganismiMus musculus (Mouse)Imported
Taxonomic identifieri10090 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeMusMus

Organism-specific databases

MGIiMGI:88466. Col9a2.

Subcellular locationi

GO - Cellular componenti

  1. collagen trimer Source: UniProtKB-KW
Complete GO annotation...

Expressioni

Gene expression databases

GenevestigatoriQ8K2W0.

Family & Domainsi

Keywords - Domaini

CollagenImported

Phylogenomic databases

HOVERGENiHBG004933.
InParanoidiQ8K2W0.

Family and domain databases

InterProiIPR008160. Collagen.
[Graphical view]
PfamiPF01391. Collagen. 10 hits.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q8K2W0-1 [UniParc]FASTAAdd to Basket

« Hide

MTAVPAPRSL FVLLQVLWLA LAQIRGPPGE PGPPGPPGPP GVPGSDGIDG    50
DKGPPGKVGP PGSKGEPGKP GPDGPDGKPG IDGLMGAKGE PGPVGTPGVK 100
GQPGLPGPPG LPGPGFAGPP GPPGPVGLPG EIGTPGPKGD PGPEGPSGPP 150
GPPGKPGRPG TIQGLEGSAD FLCPTNCPAG VKGPQGLQGV KGHPGKRGIL 200
GDPGRQGKPG PKGDVGASGE QGIPGPPGPQ GIRGYPGMAG PKGEMGPRGY 250
KGMVGSIGAA GPPGEEGPRG PPGRAGEKGD VGSQGARGPQ GITGPKGITG 300
PPGIDGKDGT PGIPGMKGSA GQVGRPGSPG HQGLAGVPGQ PGTKGGPGDK 350
GEPGQQGLPG VSGPPGKEGE PGPRGEIGPQ GIMGQKGDQG ERGPVGQPGP 400
QGRQGPKGEQ GPPGIPGPQG LPGIKGDKGS PGKTGPRGGV GDPGVAGLPG 450
EKGEKGQSGE PGLKGQQGVR GETGYPGPSG DIGAPGVQGY PGLPGPRGLV 500
GDRGVPGQPG RQGVVGRAAS DQHIVDVVLK MIQEQLAEVA VSAKREALGA 550
AGMVGLPGPP GPPGYPGKQG PNGHPGPRGI PGIVGAVGQI GNTGPKGKRG 600
EKGDRGEMGH GHPGMPGPPG IPGLPGRPGQ AINGKDGDRG SPGAPGEAGR 650
PGRPGPVGLP GFCEPAACLG ASAYTSARLT EPGSIKGP 688
Length:688
Mass (Da):65,349
Last modified:October 1, 2002 - v1
Checksum:iF4C657249F676D68
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
BC029697 mRNA. Translation: AAH29697.1.
CH466552 Genomic DNA. Translation: EDL30410.1.
UniGeneiMm.269384.

Genome annotation databases

UCSCiuc008unx.2. mouse.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
BC029697 mRNA. Translation: AAH29697.1 .
CH466552 Genomic DNA. Translation: EDL30410.1 .
UniGenei Mm.269384.

3D structure databases

ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

UCSCi uc008unx.2. mouse.

Organism-specific databases

MGIi MGI:88466. Col9a2.

Phylogenomic databases

HOVERGENi HBG004933.
InParanoidi Q8K2W0.

Miscellaneous databases

ChiTaRSi COL9A2. mouse.
SOURCEi Search...

Gene expression databases

Genevestigatori Q8K2W0.

Family and domain databases

InterProi IPR008160. Collagen.
[Graphical view ]
Pfami PF01391. Collagen. 10 hits.
[Graphical view ]
ProtoNeti Search...

Publicationsi

« Hide 'large scale' publications
  1. "A comparison of whole-genome shotgun-derived mouse chromosome 16 and the human genome."
    Mural R.J., Adams M.D., Myers E.W., Smith H.O., Miklos G.L., Wides R., Halpern A., Li P.W., Sutton G.G., Nadeau J., Salzberg S.L., Holt R.A., Kodira C.D., Lu F., Chen L., Deng Z., Evangelista C.C., Gan W.
    , Heiman T.J., Li J., Li Z., Merkulov G.V., Milshina N.V., Naik A.K., Qi R., Shue B.C., Wang A., Wang J., Wang X., Yan X., Ye J., Yooseph S., Zhao Q., Zheng L., Zhu S.C., Biddick K., Bolanos R., Delcher A.L., Dew I.M., Fasulo D., Flanigan M.J., Huson D.H., Kravitz S.A., Miller J.R., Mobarry C.M., Reinert K., Remington K.A., Zhang Q., Zheng X.H., Nusskern D.R., Lai Z., Lei Y., Zhong W., Yao A., Guan P., Ji R.R., Gu Z., Wang Z.Y., Zhong F., Xiao C., Chiang C.C., Yandell M., Wortman J.R., Amanatides P.G., Hladun S.L., Pratts E.C., Johnson J.E., Dodson K.L., Woodford K.J., Evans C.A., Gropman B., Rusch D.B., Venter E., Wang M., Smith T.J., Houck J.T., Tompkins D.E., Haynes C., Jacob D., Chin S.H., Allen D.R., Dahlke C.E., Sanders R., Li K., Liu X., Levitsky A.A., Majoros W.H., Chen Q., Xia A.C., Lopez J.R., Donnelly M.T., Newman M.H., Glodek A., Kraft C.L., Nodell M., Ali F., An H.J., Baldwin-Pitts D., Beeson K.Y., Cai S., Carnes M., Carver A., Caulk P.M., Center A., Chen Y.H., Cheng M.L., Coyne M.D., Crowder M., Danaher S., Davenport L.B., Desilets R., Dietz S.M., Doup L., Dullaghan P., Ferriera S., Fosler C.R., Gire H.C., Gluecksmann A., Gocayne J.D., Gray J., Hart B., Haynes J., Hoover J., Howland T., Ibegwam C., Jalali M., Johns D., Kline L., Ma D.S., MacCawley S., Magoon A., Mann F., May D., McIntosh T.C., Mehta S., Moy L., Moy M.C., Murphy B.J., Murphy S.D., Nelson K.A., Nuri Z., Parker K.A., Prudhomme A.C., Puri V.N., Qureshi H., Raley J.C., Reardon M.S., Regier M.A., Rogers Y.H., Romblad D.L., Schutz J., Scott J.L., Scott R., Sitter C.D., Smallwood M., Sprague A.C., Stewart E., Strong R.V., Suh E., Sylvester K., Thomas R., Tint N.N., Tsonis C., Wang G., Wang G., Williams M.S., Williams S.M., Windsor S.M., Wolfe K., Wu M.M., Zaveri J., Chaturvedi K., Gabrielian A.E., Ke Z., Sun J., Subramanian G., Venter J.C., Pfannkoch C.M., Barnstead M., Stephenson L.D.
    Science 296:1661-1671(2002) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: MixedImported.
  2. "The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)."
    The MGC Project Team
    Gerhard D.S., Wagner L., Feingold E.A., Shenmen C.M., Grouse L.H., Schuler G., Klein S.L., Old S., Rasooly R., Good P., Guyer M., Peck A.M., Derge J.G., Lipman D., Collins F.S., Jang W., Sherry S., Feolo M.
    , Misquitta L., Lee E., Rotmistrovsky K., Greenhut S.F., Schaefer C.F., Buetow K., Bonner T.I., Haussler D., Kent J., Kiekhaus M., Furey T., Brent M., Prange C., Schreiber K., Shapiro N., Bhat N.K., Hopkins R.F., Hsie F., Driscoll T., Soares M.B., Casavant T.L., Scheetz T.E., Brown-stein M.J., Usdin T.B., Toshiyuki S., Carninci P., Piao Y., Dudekula D.B., Ko M.S., Kawakami K., Suzuki Y., Sugano S., Gruber C.E., Smith M.R., Simmons B., Moore T., Waterman R., Johnson S.L., Ruan Y., Wei C.L., Mathavan S., Gunaratne P.H., Wu J., Garcia A.M., Hulyk S.W., Fuh E., Yuan Y., Sneed A., Kowis C., Hodgson A., Muzny D.M., McPherson J., Gibbs R.A., Fahey J., Helton E., Ketteman M., Madan A., Rodrigues S., Sanchez A., Whiting M., Madari A., Young A.C., Wetherby K.D., Granite S.J., Kwong P.N., Brinkley C.P., Pearson R.L., Bouffard G.G., Blakesly R.W., Green E.D., Dickson M.C., Rodriguez A.C., Grimwood J., Schmutz J., Myers R.M., Butterfield Y.S., Griffith M., Griffith O.L., Krzywinski M.I., Liao N., Morin R., Morrin R., Palmquist D., Petrescu A.S., Skalska U., Smailus D.E., Stott J.M., Schnerch A., Schein J.E., Jones S.J., Holt R.A., Baross A., Marra M.A., Clifton S., Makowski K.A., Bosak S., Malek J.
    Genome Res. 14:2121-2127(2004) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
    Strain: FVB/NImported.
    Tissue: Mammary tumor. C3Imported.
  3. Mural R.J., Adams M.D., Myers E.W., Smith H.O., Venter J.C.
    Submitted (SEP-2005) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: MixedImported.

Entry informationi

Entry nameiQ8K2W0_MOUSE
AccessioniPrimary (citable) accession number: Q8K2W0
Entry historyi
Integrated into UniProtKB/TrEMBL: October 1, 2002
Last sequence update: October 1, 2002
Last modified: July 9, 2014
This is version 57 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

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