Q8K2N4 (Q8K2N4_MOUSE) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Cc2d1a protein EMBL AAH30439.1

Gene names

Name:	Cc2d1a MGI 2384831
Synonyms:	BC016188 MGI 2384831

Organism

Mus musculus (Mouse) EMBL AAH30439.1

Taxonomic identifier

10090 [NCBI]

Taxonomic lineage

cellular organisms › Eukaryota › Opisthokonta › Metazoa › Eumetazoa › Bilateria › Deuterostomia › Chordata › Craniata › Vertebrata › Gnathostomata › Teleostomi › Euteleostomi › Sarcopterygii › Tetrapoda › Amniota › Mammalia › Theria › Eutheria › Euarchontoglires › Glires › Rodentia › Sciurognathi › Muroidea › Muridae › Murinae › Mus › Mus

Protein attributes

Sequence length	290 AA.
Sequence status	Complete.
Protein existence	Evidence at transcript level

General annotation (Comments)

Sequence similarities

Contains 1 C2 domain. RuleBase RU003412

Ontologies

Gene Ontology (GO)
Molecular_function	RNA polymerase II core promoter proximal region sequence-specific DNA binding Inferred from direct assay PubMed 21155902. Source: MGI RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in negative regulation of transcription Inferred from direct assay PubMed 21155902. Source: MGI
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q8K2N4 [UniParc]. Last modified October 1, 2002. Version 1. Checksum: ADEC6716807B9448	FASTA	290	32,780
	10 20 30 40 50 60 MLLFIVKGIN LPTPTGLSPS DLDAFVRFDF PYPNVEEAQK DKTSVIKNTD SPEFKEQFKL 70 80 90 100 110 120 CINRGHRGFR RAIQTKGIKF EVVHKGGLFK TDRVLGTAQL KLGTLETACE VHEILEVLDG 130 140 150 160 170 180 RRPTGGRLEV MVRIREPLTA QQLETTTERW LVIDHIPAAM PTVTGPKAKA PLIPASSREA 190 200 210 220 230 240 GNRSARPLHS LSVLAFDQER LERKILALRQ ARRPVPPEVA QQYQDVVQRS QWQRAQLEQG 250 260 270 280 290 GAALRREYAS HLERQLHFYT EAARRLGYDG SRVSWTYVSV RYQVRGSGSS

References

[1]

"The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)." The MGC Project Team Gerhard D.S., Wagner L., Feingold E.A., Shenmen C.M., Grouse L.H., Schuler G., Klein S.L., Old S., Rasooly R., Good P., Guyer M., Peck A.M., Derge J.G., Lipman D., Collins F.S., Jang W., Sherry S., Feolo M. , Misquitta L., Lee E., Rotmistrovsky K., Greenhut S.F., Schaefer C.F., Buetow K., Bonner T.I., Haussler D., Kent J., Kiekhaus M., Furey T., Brent M., Prange C., Schreiber K., Shapiro N., Bhat N.K., Hopkins R.F., Hsie F., Driscoll T., Soares M.B., Casavant T.L., Scheetz T.E., Brown-stein M.J., Usdin T.B., Toshiyuki S., Carninci P., Piao Y., Dudekula D.B., Ko M.S., Kawakami K., Suzuki Y., Sugano S., Gruber C.E., Smith M.R., Simmons B., Moore T., Waterman R., Johnson S.L., Ruan Y., Wei C.L., Mathavan S., Gunaratne P.H., Wu J., Garcia A.M., Hulyk S.W., Fuh E., Yuan Y., Sneed A., Kowis C., Hodgson A., Muzny D.M., McPherson J., Gibbs R.A., Fahey J., Helton E., Ketteman M., Madan A., Rodrigues S., Sanchez A., Whiting M., Madari A., Young A.C., Wetherby K.D., Granite S.J., Kwong P.N., Brinkley C.P., Pearson R.L., Bouffard G.G., Blakesly R.W., Green E.D., Dickson M.C., Rodriguez A.C., Grimwood J., Schmutz J., Myers R.M., Butterfield Y.S., Griffith M., Griffith O.L., Krzywinski M.I., Liao N., Morin R., Morrin R., Palmquist D., Petrescu A.S., Skalska U., Smailus D.E., Stott J.M., Schnerch A., Schein J.E., Jones S.J., Holt R.A., Baross A., Marra M.A., Clifton S., Makowski K.A., Bosak S., Malek J. Genome Res. 14:2121-2127(2004) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA]. Strain: FVB/N-3 EMBL AAH30439.1. Tissue: Mammary tumor. MMTV-LTR/INT3 model. 5 month old mouse. Taken by biopsy. EMBL AAH30439.1.

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Additional computationally mapped references.

Cross-references

Sequence databases
EMBL GenBank DDBJ	BC030439 mRNA. Translation: AAH30439.1.
IPI	IPI00474925.
UniGene	Mm.41424.
3D structure databases
ProteinModelPortal	Q8K2N4.
ModBase	Search...
Protein-protein interaction databases
STRING	Q8K2N4.
Proteomic databases
PRIDE	Q8K2N4.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
UCSC	uc009mmb.1. mouse.
Organism-specific databases
MGI	MGI:2384831. Cc2d1a.
Phylogenomic databases
HOGENOM	HOG000285993.
InParanoid	Q8K2N4.
Gene expression databases
ArrayExpress	Q8K2N4.
Genevestigator	Q8K2N4.
Family and domain databases
InterPro	IPR000008. C2_Ca-dep. IPR008973. C2_Ca/lipid-bd_dom_CaLB. IPR018029. C2_membr_targeting. [Graphical view]
Pfam	PF00168. C2. 1 hit. [Graphical view]
SMART	SM00239. C2. 1 hit. [Graphical view]
SUPFAM	SSF49562. C2_CaLB. 1 hit.
PROSITE	PS50004. C2. 1 hit. [Graphical view]
ProtoNet	Search...
Other
SOURCE	Search...

Entry information

Entry name

Q8K2N4_MOUSE

Accession

Primary (citable) accession number: Q8K2N4

Entry history

Integrated into UniProtKB/TrEMBL:	October 1, 2002
Last sequence update:	October 1, 2002
Last modified:	March 6, 2013
This is version 56 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)