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Q8K119 (Q8K119_MOUSE) Unreviewed, UniProtKB/TrEMBL

Last modified June 11, 2014. Version 96. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names

Protein Pms1 Ensembl ENSMUSP00000027267
Gene names
Name:Pms1 EMBL AAH28939.1 MGI 1202302 Ensembl ENSMUSP00000027267
OrganismMus musculus (Mouse) [Reference proteome] EMBL AAH28939.1
Taxonomic identifier10090 [NCBI]
Taxonomic lineageEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeMusMus

Protein attributes

Sequence length917 AA.
Sequence statusComplete.
Protein existenceEvidence at transcript level

Sequences

Sequence LengthMass (Da)Tools
Q8K119 [UniParc].

Last modified October 1, 2002. Version 1.
Checksum: 042C9FC500EE339F

FASTA917103,595
        10         20         30         40         50         60 
MKQLPAATVR LLSSSQTITS VVSVVKELIE NSLDAGATSI EVKLENYGFD KIEIRDNGEG 

        70         80         90        100        110        120 
IKAVDVPVMA VKYYTSKISS HEDLGNLTTY GFRGEALGSI CNVAEVVVTT RTSADDFSTQ 

       130        140        150        160        170        180 
YVLDGSGHIL SQKPSHLGQG TTVTALKLFK NLPVRKQFYS TAKKCKDELK NVQDLLISYG 

       190        200        210        220        230        240 
VLKPDVRITF VHNKAVIWQK SRVPDHRMAL MSVLGTAVMG NMESVEQHCE QSQIYLSGFF 

       250        260        270        280        290        300 
PKHDADHNST SLSTPERSFI FINSRPVHQK DILKLIRRYY NLKCLKESTR LYPIFFLKID 

       310        320        330        340        350        360 
VPSAEVDINL TPDKSQVLLQ NKESVLIALE NLMMTCYGPL PTTESSENNR VDISSANMVV 

       370        380        390        400        410        420 
SQTAETDVLF NKMESFGNNY PNADTSAIHF QKDESRKNID HHLNEQINIG NYFDGHFSGD 

       430        440        450        460        470        480 
INKDTFQNIP MNNLSSETNQ SNHSETHSVG SMEHIQGENG RNGTGGSGGD GRETLPEKAL 

       490        500        510        520        530        540 
EICADDWSKG NLCNSMGENI EPVKILVPQK SLSCKVTSSH PRLEPETLSD GPCSRTSDVI 

       550        560        570        580        590        600 
HNRSGRLTAY DLISSRAVKK PMSASALFIQ DHRTQFLTEN PKTGLEDATE QIKARWETLS 

       610        620        630        640        650        660 
EEEKHKYEEK AKKDLERYNN QMKKAIEQET QVSLKDGRKK RATSSWGWTQ KHKVKDSSNQ 

       670        680        690        700        710        720 
PKLDELFQSQ NEKKKSENIK ITEIPFSMEN LKANLKKQKE VDLEEKDEIY LIHSLKFPDS 

       730        740        750        760        770        780 
WLVTSRADVM LLNPYRVEEA LLFKRLLENH KLLAEPLEKP IILTESLLNG SHYLEVLYKM 

       790        800        810        820        830        840 
STVEERGSGS AYLCDPRLTA NGFKIRLTPG VSSTENYLEI EGMAQCLPFY GIMDLKEILN 

       850        860        870        880        890        900 
AIVNKNAKEI YECRPRKVIN YLEGEAVRLS RQLPMYLPRE DVQDLIYRMK HQFGKEIKGC 

       910 
VHGRPFFHHL THLPGTS 

« Hide

References

« Hide 'large scale' references
[1]"The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)."
The MGC Project Team
Gerhard D.S., Wagner L., Feingold E.A., Shenmen C.M., Grouse L.H., Schuler G., Klein S.L., Old S., Rasooly R., Good P., Guyer M., Peck A.M., Derge J.G., Lipman D., Collins F.S., Jang W., Sherry S., Feolo M. expand/collapse author list , Misquitta L., Lee E., Rotmistrovsky K., Greenhut S.F., Schaefer C.F., Buetow K., Bonner T.I., Haussler D., Kent J., Kiekhaus M., Furey T., Brent M., Prange C., Schreiber K., Shapiro N., Bhat N.K., Hopkins R.F., Hsie F., Driscoll T., Soares M.B., Casavant T.L., Scheetz T.E., Brown-stein M.J., Usdin T.B., Toshiyuki S., Carninci P., Piao Y., Dudekula D.B., Ko M.S., Kawakami K., Suzuki Y., Sugano S., Gruber C.E., Smith M.R., Simmons B., Moore T., Waterman R., Johnson S.L., Ruan Y., Wei C.L., Mathavan S., Gunaratne P.H., Wu J., Garcia A.M., Hulyk S.W., Fuh E., Yuan Y., Sneed A., Kowis C., Hodgson A., Muzny D.M., McPherson J., Gibbs R.A., Fahey J., Helton E., Ketteman M., Madan A., Rodrigues S., Sanchez A., Whiting M., Madari A., Young A.C., Wetherby K.D., Granite S.J., Kwong P.N., Brinkley C.P., Pearson R.L., Bouffard G.G., Blakesly R.W., Green E.D., Dickson M.C., Rodriguez A.C., Grimwood J., Schmutz J., Myers R.M., Butterfield Y.S., Griffith M., Griffith O.L., Krzywinski M.I., Liao N., Morin R., Morrin R., Palmquist D., Petrescu A.S., Skalska U., Smailus D.E., Stott J.M., Schnerch A., Schein J.E., Jones S.J., Holt R.A., Baross A., Marra M.A., Clifton S., Makowski K.A., Bosak S., Malek J.
Genome Res. 14:2121-2127(2004) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
Tissue: Eye EMBL AAH28939.1.
[2]"Lineage-specific biology revealed by a finished genome assembly of the mouse."
Church D.M., Goodstadt L., Hillier L.W., Zody M.C., Goldstein S., She X., Bult C.J., Agarwala R., Cherry J.L., DiCuccio M., Hlavina W., Kapustin Y., Meric P., Maglott D., Birtle Z., Marques A.C., Graves T., Zhou S. expand/collapse author list , Teague B., Potamousis K., Churas C., Place M., Herschleb J., Runnheim R., Forrest D., Amos-Landgraf J., Schwartz D.C., Cheng Z., Lindblad-Toh K., Eichler E.E., Ponting C.P.
PLoS Biol. 7:E1000112-E1000112(2009) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: C57BL/6J Ensembl ENSMUSP00000027267.
[3]Ensembl
Submitted (FEB-2012) to UniProtKB
Cited for: IDENTIFICATION.
Strain: C57BL/6J Ensembl ENSMUSP00000027267.
+Additional computationally mapped references.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AC129288 Genomic DNA. No translation available.
AC153650 Genomic DNA. No translation available.
BC028939 mRNA. Translation: AAH28939.1.
RefSeqNP_705784.1. NM_153556.1.
XP_006496001.1. XM_006495938.1.
XP_006496002.1. XM_006495939.1.
XP_006496003.1. XM_006495940.1.
XP_006496004.1. XM_006495941.1.
XP_006496005.1. XM_006495942.1.
UniGeneMm.60499.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblENSMUST00000027267; ENSMUSP00000027267; ENSMUSG00000026098.
GeneID227099.
KEGGmmu:227099.
UCSCuc007ayv.2. mouse.

Organism-specific databases

CTD5378.
MGIMGI:1202302. Pms1.

Phylogenomic databases

GeneTreeENSGT00530000063289.
HOGENOMHOG000039972.
HOVERGENHBG031886.
InParanoidQ8K119.
KOK10864.
OMAPFFHHLT.
OrthoDBEOG7S4X59.
TreeFamTF300711.

Gene expression databases

GenevestigatorQ8K119.

Family and domain databases

Gene3D1.10.30.10. 1 hit.
3.30.230.10. 1 hit.
3.30.565.10. 1 hit.
InterProIPR013507. DNA_mismatch_repair_C.
IPR014762. DNA_mismatch_repair_CS.
IPR002099. DNA_mismatch_repair_fam.
IPR003594. HATPase_ATP-bd.
IPR009071. HMG_box_dom.
IPR020568. Ribosomal_S5_D2-typ_fold.
IPR014721. Ribosomal_S5_D2-typ_fold_subgr.
[Graphical view]
PfamPF01119. DNA_mis_repair. 1 hit.
PF00505. HMG_box. 1 hit.
[Graphical view]
SMARTSM00387. HATPase_c. 1 hit.
SM00398. HMG. 1 hit.
[Graphical view]
SUPFAMSSF47095. SSF47095. 1 hit.
SSF54211. SSF54211. 1 hit.
SSF55874. SSF55874. 1 hit.
TIGRFAMsTIGR00585. mutl. 1 hit.
PROSITEPS00058. DNA_MISMATCH_REPAIR_1. 1 hit.
PS50118. HMG_BOX_2. 1 hit.
[Graphical view]
ProtoNetSearch...

Other

NextBio378474.
PROQ8K119.
SOURCESearch...

Entry information

Entry nameQ8K119_MOUSE
AccessionPrimary (citable) accession number: Q8K119
Entry history
Integrated into UniProtKB/TrEMBL: October 1, 2002
Last sequence update: October 1, 2002
Last modified: June 11, 2014
This is version 96 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)