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Q8K119

- Q8K119_MOUSE

UniProt

Q8K119 - Q8K119_MOUSE

Protein
Submitted name:

Postmeiotic segregation increased 1 (S. cerevisiae)

Gene

Pms1

Organism
Mus musculus (Mouse)
Status
Unreviewed - Annotation score: 2 out of 5- Experimental evidence at transcript leveli
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    • History
      Entry version 98 (01 Oct 2014)
      Sequence version 1 (01 Oct 2002)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. ATPase activity Source: RefGenome
    2. ATP binding Source: InterPro
    3. mismatched DNA binding Source: InterPro
    4. single-stranded DNA binding Source: RefGenome

    GO - Biological processi

    1. ATP catabolic process Source: GOC
    2. mismatch repair Source: MGI
    3. response to drug Source: Ensembl

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    Postmeiotic segregation increased 1 (S. cerevisiae)Imported
    Submitted name:
    Protein Pms1Imported
    Gene namesi
    Name:Pms1Imported
    OrganismiMus musculus (Mouse)Imported
    Taxonomic identifieri10090 [NCBI]
    Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeMusMus
    ProteomesiUP000000589: Chromosome 1

    Organism-specific databases

    MGIiMGI:1202302. Pms1.

    Subcellular locationi

    GO - Cellular componenti

    1. MutLalpha complex Source: RefGenome

    Expressioni

    Gene expression databases

    GenevestigatoriQ8K119.

    Family & Domainsi

    Phylogenomic databases

    GeneTreeiENSGT00530000063289.
    HOGENOMiHOG000039972.
    HOVERGENiHBG031886.
    InParanoidiQ8K119.
    KOiK10864.
    OMAiPFFHHLT.
    OrthoDBiEOG7S4X59.
    TreeFamiTF300711.

    Family and domain databases

    Gene3Di1.10.30.10. 1 hit.
    3.30.230.10. 1 hit.
    3.30.565.10. 1 hit.
    InterProiIPR013507. DNA_mismatch_repair_C.
    IPR014762. DNA_mismatch_repair_CS.
    IPR002099. DNA_mismatch_repair_fam.
    IPR003594. HATPase_ATP-bd.
    IPR009071. HMG_box_dom.
    IPR020568. Ribosomal_S5_D2-typ_fold.
    IPR014721. Ribosomal_S5_D2-typ_fold_subgr.
    [Graphical view]
    PfamiPF01119. DNA_mis_repair. 1 hit.
    PF00505. HMG_box. 1 hit.
    [Graphical view]
    SMARTiSM00387. HATPase_c. 1 hit.
    SM00398. HMG. 1 hit.
    [Graphical view]
    SUPFAMiSSF47095. SSF47095. 1 hit.
    SSF54211. SSF54211. 1 hit.
    SSF55874. SSF55874. 1 hit.
    TIGRFAMsiTIGR00585. mutl. 1 hit.
    PROSITEiPS00058. DNA_MISMATCH_REPAIR_1. 1 hit.
    PS50118. HMG_BOX_2. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    Q8K119-1 [UniParc]FASTAAdd to Basket

    « Hide

    MKQLPAATVR LLSSSQTITS VVSVVKELIE NSLDAGATSI EVKLENYGFD    50
    KIEIRDNGEG IKAVDVPVMA VKYYTSKISS HEDLGNLTTY GFRGEALGSI 100
    CNVAEVVVTT RTSADDFSTQ YVLDGSGHIL SQKPSHLGQG TTVTALKLFK 150
    NLPVRKQFYS TAKKCKDELK NVQDLLISYG VLKPDVRITF VHNKAVIWQK 200
    SRVPDHRMAL MSVLGTAVMG NMESVEQHCE QSQIYLSGFF PKHDADHNST 250
    SLSTPERSFI FINSRPVHQK DILKLIRRYY NLKCLKESTR LYPIFFLKID 300
    VPSAEVDINL TPDKSQVLLQ NKESVLIALE NLMMTCYGPL PTTESSENNR 350
    VDISSANMVV SQTAETDVLF NKMESFGNNY PNADTSAIHF QKDESRKNID 400
    HHLNEQINIG NYFDGHFSGD INKDTFQNIP MNNLSSETNQ SNHSETHSVG 450
    SMEHIQGENG RNGTGGSGGD GRETLPEKAL EICADDWSKG NLCNSMGENI 500
    EPVKILVPQK SLSCKVTSSH PRLEPETLSD GPCSRTSDVI HNRSGRLTAY 550
    DLISSRAVKK PMSASALFIQ DHRTQFLTEN PKTGLEDATE QIKARWETLS 600
    EEEKHKYEEK AKKDLERYNN QMKKAIEQET QVSLKDGRKK RATSSWGWTQ 650
    KHKVKDSSNQ PKLDELFQSQ NEKKKSENIK ITEIPFSMEN LKANLKKQKE 700
    VDLEEKDEIY LIHSLKFPDS WLVTSRADVM LLNPYRVEEA LLFKRLLENH 750
    KLLAEPLEKP IILTESLLNG SHYLEVLYKM STVEERGSGS AYLCDPRLTA 800
    NGFKIRLTPG VSSTENYLEI EGMAQCLPFY GIMDLKEILN AIVNKNAKEI 850
    YECRPRKVIN YLEGEAVRLS RQLPMYLPRE DVQDLIYRMK HQFGKEIKGC 900
    VHGRPFFHHL THLPGTS 917
    Length:917
    Mass (Da):103,595
    Last modified:October 1, 2002 - v1
    Checksum:i042C9FC500EE339F
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AC129288 Genomic DNA. No translation available.
    AC153650 Genomic DNA. No translation available.
    BC028939 mRNA. Translation: AAH28939.1.
    RefSeqiNP_705784.1. NM_153556.1.
    XP_006496001.1. XM_006495938.1.
    XP_006496002.1. XM_006495939.1.
    XP_006496003.1. XM_006495940.1.
    XP_006496004.1. XM_006495941.1.
    XP_006496005.1. XM_006495942.1.
    UniGeneiMm.60499.

    Genome annotation databases

    EnsembliENSMUST00000027267; ENSMUSP00000027267; ENSMUSG00000026098.
    GeneIDi227099.
    KEGGimmu:227099.
    UCSCiuc007ayv.2. mouse.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AC129288 Genomic DNA. No translation available.
    AC153650 Genomic DNA. No translation available.
    BC028939 mRNA. Translation: AAH28939.1 .
    RefSeqi NP_705784.1. NM_153556.1.
    XP_006496001.1. XM_006495938.1.
    XP_006496002.1. XM_006495939.1.
    XP_006496003.1. XM_006495940.1.
    XP_006496004.1. XM_006495941.1.
    XP_006496005.1. XM_006495942.1.
    UniGenei Mm.60499.

    3D structure databases

    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    Ensembli ENSMUST00000027267 ; ENSMUSP00000027267 ; ENSMUSG00000026098 .
    GeneIDi 227099.
    KEGGi mmu:227099.
    UCSCi uc007ayv.2. mouse.

    Organism-specific databases

    CTDi 5378.
    MGIi MGI:1202302. Pms1.

    Phylogenomic databases

    GeneTreei ENSGT00530000063289.
    HOGENOMi HOG000039972.
    HOVERGENi HBG031886.
    InParanoidi Q8K119.
    KOi K10864.
    OMAi PFFHHLT.
    OrthoDBi EOG7S4X59.
    TreeFami TF300711.

    Miscellaneous databases

    NextBioi 378474.
    PROi Q8K119.
    SOURCEi Search...

    Gene expression databases

    Genevestigatori Q8K119.

    Family and domain databases

    Gene3Di 1.10.30.10. 1 hit.
    3.30.230.10. 1 hit.
    3.30.565.10. 1 hit.
    InterProi IPR013507. DNA_mismatch_repair_C.
    IPR014762. DNA_mismatch_repair_CS.
    IPR002099. DNA_mismatch_repair_fam.
    IPR003594. HATPase_ATP-bd.
    IPR009071. HMG_box_dom.
    IPR020568. Ribosomal_S5_D2-typ_fold.
    IPR014721. Ribosomal_S5_D2-typ_fold_subgr.
    [Graphical view ]
    Pfami PF01119. DNA_mis_repair. 1 hit.
    PF00505. HMG_box. 1 hit.
    [Graphical view ]
    SMARTi SM00387. HATPase_c. 1 hit.
    SM00398. HMG. 1 hit.
    [Graphical view ]
    SUPFAMi SSF47095. SSF47095. 1 hit.
    SSF54211. SSF54211. 1 hit.
    SSF55874. SSF55874. 1 hit.
    TIGRFAMsi TIGR00585. mutl. 1 hit.
    PROSITEi PS00058. DNA_MISMATCH_REPAIR_1. 1 hit.
    PS50118. HMG_BOX_2. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)."
      The MGC Project Team
      Gerhard D.S., Wagner L., Feingold E.A., Shenmen C.M., Grouse L.H., Schuler G., Klein S.L., Old S., Rasooly R., Good P., Guyer M., Peck A.M., Derge J.G., Lipman D., Collins F.S., Jang W., Sherry S., Feolo M.
      , Misquitta L., Lee E., Rotmistrovsky K., Greenhut S.F., Schaefer C.F., Buetow K., Bonner T.I., Haussler D., Kent J., Kiekhaus M., Furey T., Brent M., Prange C., Schreiber K., Shapiro N., Bhat N.K., Hopkins R.F., Hsie F., Driscoll T., Soares M.B., Casavant T.L., Scheetz T.E., Brown-stein M.J., Usdin T.B., Toshiyuki S., Carninci P., Piao Y., Dudekula D.B., Ko M.S., Kawakami K., Suzuki Y., Sugano S., Gruber C.E., Smith M.R., Simmons B., Moore T., Waterman R., Johnson S.L., Ruan Y., Wei C.L., Mathavan S., Gunaratne P.H., Wu J., Garcia A.M., Hulyk S.W., Fuh E., Yuan Y., Sneed A., Kowis C., Hodgson A., Muzny D.M., McPherson J., Gibbs R.A., Fahey J., Helton E., Ketteman M., Madan A., Rodrigues S., Sanchez A., Whiting M., Madari A., Young A.C., Wetherby K.D., Granite S.J., Kwong P.N., Brinkley C.P., Pearson R.L., Bouffard G.G., Blakesly R.W., Green E.D., Dickson M.C., Rodriguez A.C., Grimwood J., Schmutz J., Myers R.M., Butterfield Y.S., Griffith M., Griffith O.L., Krzywinski M.I., Liao N., Morin R., Morrin R., Palmquist D., Petrescu A.S., Skalska U., Smailus D.E., Stott J.M., Schnerch A., Schein J.E., Jones S.J., Holt R.A., Baross A., Marra M.A., Clifton S., Makowski K.A., Bosak S., Malek J.
      Genome Res. 14:2121-2127(2004) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
      Tissue: EyeImported.
    2. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: C57BL/6JImported.
    3. Ensembl
      Submitted (FEB-2012) to UniProtKB
      Cited for: IDENTIFICATION.
      Strain: C57BL/6JImported.

    Entry informationi

    Entry nameiQ8K119_MOUSE
    AccessioniPrimary (citable) accession number: Q8K119
    Entry historyi
    Integrated into UniProtKB/TrEMBL: October 1, 2002
    Last sequence update: October 1, 2002
    Last modified: October 1, 2014
    This is version 98 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3