Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein
Submitted name:

Chd3 protein

Gene

Chd3

Organism
Mus musculus (Mouse)
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Experimental evidence at transcript leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
Chd3 proteinImported
Gene namesi
Name:Chd3Imported
OrganismiMus musculus (Mouse)Imported
Taxonomic identifieri10090 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeMusMus

Organism-specific databases

MGIiMGI:1344395. Chd3.

Subcellular locationi

GO - Cellular componenti

  • centrosome Source: MGI
  • cytoplasm Source: MGI
  • intermediate filament cytoskeleton Source: MGI
  • nucleolus Source: MGI
  • nucleus Source: MGI
  • NuRD complex Source: MGI
Complete GO annotation...

PTM / Processingi

Proteomic databases

PaxDbiQ8K0T3.
PeptideAtlasiQ8K0T3.

Expressioni

Gene expression databases

BgeeiQ8K0T3.

Interactioni

Protein-protein interaction databases

STRINGi10090.ENSMUSP00000104301.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini30 – 200171CHDCT2InterPro annotationAdd
BLAST

Phylogenomic databases

eggNOGiKOG0383. Eukaryota.
COG0553. LUCA.
HOVERGENiHBG071529.
KOiK11642.

Family and domain databases

InterProiIPR012957. CHD_C2.
[Graphical view]
PfamiPF08074. CHDCT2. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q8K0T3-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MFNIADGGFT ELHTLWQNEE RAAISSGKLN EIWHRRHDYW LLAGIVLHGY
60 70 80 90 100
ARWQDIQNDA QFAIINEPFK TEANKGNFLE MKNKFLARRF KLLEQALVIE
110 120 130 140 150
EQLRRAAYLN LSQEPAHPAM ALHARFAEAE CLAESHQHLS KESLAGNKPA
160 170 180 190 200
NAVLHKVLNQ LEELLSDMKA DVTRLPATLS RIPPIAARLQ MSERSILSRL
210 220 230 240 250
ASKGTEPHPT PAFPPGPYAT PPGYGAAFSA APVGALAAAG ANYSQMPAGS
260 270 280 290
FITATTNGPP VLVKKEKEMV GALVSDGLGL DRKEPRAGEV ICIDD
Length:295
Mass (Da):32,332
Last modified:October 1, 2002 - v1
Checksum:iCE7328D8210A68A3
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BC030435 mRNA. Translation: AAH30435.1.
RefSeqiNP_666131.3. NM_146019.4.
UniGeneiMm.178246.

Genome annotation databases

GeneIDi216848.
KEGGimmu:216848.
UCSCiuc007jpx.3. mouse.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BC030435 mRNA. Translation: AAH30435.1.
RefSeqiNP_666131.3. NM_146019.4.
UniGeneiMm.178246.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi10090.ENSMUSP00000104301.

Proteomic databases

PaxDbiQ8K0T3.
PeptideAtlasiQ8K0T3.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

GeneIDi216848.
KEGGimmu:216848.
UCSCiuc007jpx.3. mouse.

Organism-specific databases

CTDi1107.
MGIiMGI:1344395. Chd3.

Phylogenomic databases

eggNOGiKOG0383. Eukaryota.
COG0553. LUCA.
HOVERGENiHBG071529.
KOiK11642.

Miscellaneous databases

ChiTaRSiChd3. mouse.
SOURCEiSearch...

Gene expression databases

BgeeiQ8K0T3.

Family and domain databases

InterProiIPR012957. CHD_C2.
[Graphical view]
PfamiPF08074. CHDCT2. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)."
    The MGC Project Team
    Gerhard D.S., Wagner L., Feingold E.A., Shenmen C.M., Grouse L.H., Schuler G., Klein S.L., Old S., Rasooly R., Good P., Guyer M., Peck A.M., Derge J.G., Lipman D., Collins F.S., Jang W., Sherry S., Feolo M.
    , Misquitta L., Lee E., Rotmistrovsky K., Greenhut S.F., Schaefer C.F., Buetow K., Bonner T.I., Haussler D., Kent J., Kiekhaus M., Furey T., Brent M., Prange C., Schreiber K., Shapiro N., Bhat N.K., Hopkins R.F., Hsie F., Driscoll T., Soares M.B., Casavant T.L., Scheetz T.E., Brown-stein M.J., Usdin T.B., Toshiyuki S., Carninci P., Piao Y., Dudekula D.B., Ko M.S., Kawakami K., Suzuki Y., Sugano S., Gruber C.E., Smith M.R., Simmons B., Moore T., Waterman R., Johnson S.L., Ruan Y., Wei C.L., Mathavan S., Gunaratne P.H., Wu J., Garcia A.M., Hulyk S.W., Fuh E., Yuan Y., Sneed A., Kowis C., Hodgson A., Muzny D.M., McPherson J., Gibbs R.A., Fahey J., Helton E., Ketteman M., Madan A., Rodrigues S., Sanchez A., Whiting M., Madari A., Young A.C., Wetherby K.D., Granite S.J., Kwong P.N., Brinkley C.P., Pearson R.L., Bouffard G.G., Blakesly R.W., Green E.D., Dickson M.C., Rodriguez A.C., Grimwood J., Schmutz J., Myers R.M., Butterfield Y.S., Griffith M., Griffith O.L., Krzywinski M.I., Liao N., Morin R., Morrin R., Palmquist D., Petrescu A.S., Skalska U., Smailus D.E., Stott J.M., Schnerch A., Schein J.E., Jones S.J., Holt R.A., Baross A., Marra M.A., Clifton S., Makowski K.A., Bosak S., Malek J.
    Genome Res. 14:2121-2127(2004) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
    Tissue: EyeImported.

Entry informationi

Entry nameiQ8K0T3_MOUSE
AccessioniPrimary (citable) accession number: Q8K0T3
Entry historyi
Integrated into UniProtKB/TrEMBL: October 1, 2002
Last sequence update: October 1, 2002
Last modified: July 6, 2016
This is version 80 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.