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Protein

39S ribosomal protein L48, mitochondrial

Gene

Mrpl48

Organism
Mus musculus (Mouse)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Experimental evidence at protein leveli

Functioni

Keywords - Molecular functioni

Ribonucleoprotein, Ribosomal protein

Names & Taxonomyi

Protein namesi
Recommended name:
39S ribosomal protein L48, mitochondrial
Short name:
L48mt
Short name:
MRP-L48
Gene namesi
Name:Mrpl48
OrganismiMus musculus (Mouse)
Taxonomic identifieri10090 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeMusMus
Proteomesi
  • UP000000589 Componenti: Unplaced

Organism-specific databases

MGIiMGI:1289321. Mrpl48.

Subcellular locationi

GO - Cellular componenti

  • mitochondrial ribosome Source: UniProtKB
  • mitochondrion Source: MGI
Complete GO annotation...

Keywords - Cellular componenti

Mitochondrion

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Transit peptidei1 – 2727MitochondrionSequence analysisAdd
BLAST
Chaini28 – 21118439S ribosomal protein L48, mitochondrialPRO_0000261658Add
BLAST

Amino acid modifications

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Modified residuei198 – 1981N6-succinyllysineCombined sources

Proteomic databases

EPDiQ8JZS9.
MaxQBiQ8JZS9.
PaxDbiQ8JZS9.
PRIDEiQ8JZS9.

PTM databases

iPTMnetiQ8JZS9.
PhosphoSiteiQ8JZS9.

Expressioni

Gene expression databases

CleanExiMM_MRPL48.

Interactioni

Subunit structurei

Interacts with OXA1L.By similarity

Protein-protein interaction databases

STRINGi10090.ENSMUSP00000116090.

Structurei

3D structure databases

ProteinModelPortaliQ8JZS9.
SMRiQ8JZS9. Positions 47-192.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Compositional bias

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Compositional biasi68 – 736Poly-Lys

Keywords - Domaini

Transit peptide

Phylogenomic databases

eggNOGiKOG4060. Eukaryota.
ENOG4111XHC. LUCA.
HOGENOMiHOG000070027.
HOVERGENiHBG055302.
InParanoidiQ8JZS9.
KOiK17429.
PhylomeDBiQ8JZS9.

Family and domain databases

Gene3Di3.30.70.600. 1 hit.
InterProiIPR027487. Ribosomal_L48.
IPR027486. Ribosomal_S10_dom.
[Graphical view]
PANTHERiPTHR13473. PTHR13473. 1 hit.
PfamiPF00338. Ribosomal_S10. 1 hit.
[Graphical view]
SMARTiSM01403. Ribosomal_S10. 1 hit.
[Graphical view]
SUPFAMiSSF54999. SSF54999. 1 hit.

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

Q8JZS9-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSGTLGKVLG VWTNTVSKQG FSLLRFRSLG ENPIFSAGGI LWTSRHYKTK
60 70 80 90 100
PTHGIGRYRH LVKVQEPKKK KAKVELRAIN VGTDYEYGVL NIHLTAYDMS
110 120 130 140 150
LAESYAQYVH RLCNRLSIKV EESYAMPTKT MEVMRLPDQG NKMVLDSVLT
160 170 180 190 200
THERVVQISG LSATFAEIFL EVLQSNLPEG VRLSVREHTE EDFKGRFKAR
210
PELEELLAKL N
Length:211
Mass (Da):23,953
Last modified:October 1, 2002 - v1
Checksum:i8D3479DE25A6474B
GO

Sequence cautioni

The sequence AAH96562.1 differs from that shown.Contaminating sequence. Vector contamination at the N-terminus.Curated
The sequence AAH96562.1 differs from that shown. Reason: Erroneous initiation. Curated

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AK171917 mRNA. Translation: BAE42732.1.
BC037190 mRNA. Translation: AAH37190.1.
BC096562 mRNA. Translation: AAH96562.1. Different initiation.
CCDSiCCDS21502.2.
RefSeqiNP_942128.2. NM_198831.2.
UniGeneiMm.473730.

Genome annotation databases

GeneIDi52443.
KEGGimmu:52443.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AK171917 mRNA. Translation: BAE42732.1.
BC037190 mRNA. Translation: AAH37190.1.
BC096562 mRNA. Translation: AAH96562.1. Different initiation.
CCDSiCCDS21502.2.
RefSeqiNP_942128.2. NM_198831.2.
UniGeneiMm.473730.

3D structure databases

ProteinModelPortaliQ8JZS9.
SMRiQ8JZS9. Positions 47-192.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi10090.ENSMUSP00000116090.

PTM databases

iPTMnetiQ8JZS9.
PhosphoSiteiQ8JZS9.

Proteomic databases

EPDiQ8JZS9.
MaxQBiQ8JZS9.
PaxDbiQ8JZS9.
PRIDEiQ8JZS9.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

GeneIDi52443.
KEGGimmu:52443.

Organism-specific databases

CTDi51642.
MGIiMGI:1289321. Mrpl48.

Phylogenomic databases

eggNOGiKOG4060. Eukaryota.
ENOG4111XHC. LUCA.
HOGENOMiHOG000070027.
HOVERGENiHBG055302.
InParanoidiQ8JZS9.
KOiK17429.
PhylomeDBiQ8JZS9.

Miscellaneous databases

ChiTaRSiMrpl48. mouse.
NextBioi308960.
PROiQ8JZS9.
SOURCEiSearch...

Gene expression databases

CleanExiMM_MRPL48.

Family and domain databases

Gene3Di3.30.70.600. 1 hit.
InterProiIPR027487. Ribosomal_L48.
IPR027486. Ribosomal_S10_dom.
[Graphical view]
PANTHERiPTHR13473. PTHR13473. 1 hit.
PfamiPF00338. Ribosomal_S10. 1 hit.
[Graphical view]
SMARTiSM01403. Ribosomal_S10. 1 hit.
[Graphical view]
SUPFAMiSSF54999. SSF54999. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. "The transcriptional landscape of the mammalian genome."
    Carninci P., Kasukawa T., Katayama S., Gough J., Frith M.C., Maeda N., Oyama R., Ravasi T., Lenhard B., Wells C., Kodzius R., Shimokawa K., Bajic V.B., Brenner S.E., Batalov S., Forrest A.R., Zavolan M., Davis M.J.
    , Wilming L.G., Aidinis V., Allen J.E., Ambesi-Impiombato A., Apweiler R., Aturaliya R.N., Bailey T.L., Bansal M., Baxter L., Beisel K.W., Bersano T., Bono H., Chalk A.M., Chiu K.P., Choudhary V., Christoffels A., Clutterbuck D.R., Crowe M.L., Dalla E., Dalrymple B.P., de Bono B., Della Gatta G., di Bernardo D., Down T., Engstrom P., Fagiolini M., Faulkner G., Fletcher C.F., Fukushima T., Furuno M., Futaki S., Gariboldi M., Georgii-Hemming P., Gingeras T.R., Gojobori T., Green R.E., Gustincich S., Harbers M., Hayashi Y., Hensch T.K., Hirokawa N., Hill D., Huminiecki L., Iacono M., Ikeo K., Iwama A., Ishikawa T., Jakt M., Kanapin A., Katoh M., Kawasawa Y., Kelso J., Kitamura H., Kitano H., Kollias G., Krishnan S.P., Kruger A., Kummerfeld S.K., Kurochkin I.V., Lareau L.F., Lazarevic D., Lipovich L., Liu J., Liuni S., McWilliam S., Madan Babu M., Madera M., Marchionni L., Matsuda H., Matsuzawa S., Miki H., Mignone F., Miyake S., Morris K., Mottagui-Tabar S., Mulder N., Nakano N., Nakauchi H., Ng P., Nilsson R., Nishiguchi S., Nishikawa S., Nori F., Ohara O., Okazaki Y., Orlando V., Pang K.C., Pavan W.J., Pavesi G., Pesole G., Petrovsky N., Piazza S., Reed J., Reid J.F., Ring B.Z., Ringwald M., Rost B., Ruan Y., Salzberg S.L., Sandelin A., Schneider C., Schoenbach C., Sekiguchi K., Semple C.A., Seno S., Sessa L., Sheng Y., Shibata Y., Shimada H., Shimada K., Silva D., Sinclair B., Sperling S., Stupka E., Sugiura K., Sultana R., Takenaka Y., Taki K., Tammoja K., Tan S.L., Tang S., Taylor M.S., Tegner J., Teichmann S.A., Ueda H.R., van Nimwegen E., Verardo R., Wei C.L., Yagi K., Yamanishi H., Zabarovsky E., Zhu S., Zimmer A., Hide W., Bult C., Grimmond S.M., Teasdale R.D., Liu E.T., Brusic V., Quackenbush J., Wahlestedt C., Mattick J.S., Hume D.A., Kai C., Sasaki D., Tomaru Y., Fukuda S., Kanamori-Katayama M., Suzuki M., Aoki J., Arakawa T., Iida J., Imamura K., Itoh M., Kato T., Kawaji H., Kawagashira N., Kawashima T., Kojima M., Kondo S., Konno H., Nakano K., Ninomiya N., Nishio T., Okada M., Plessy C., Shibata K., Shiraki T., Suzuki S., Tagami M., Waki K., Watahiki A., Okamura-Oho Y., Suzuki H., Kawai J., Hayashizaki Y.
    Science 309:1559-1563(2005) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
    Strain: NOD.
    Tissue: Spleen.
  2. "The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)."
    The MGC Project Team
    Genome Res. 14:2121-2127(2004) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
    Strain: FVB/N.
    Tissue: Mammary gland and Salivary gland.
  3. Cited for: IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS].
    Tissue: Brown adipose tissue, Heart, Kidney, Liver, Spleen and Testis.
  4. "SIRT5-mediated lysine desuccinylation impacts diverse metabolic pathways."
    Park J., Chen Y., Tishkoff D.X., Peng C., Tan M., Dai L., Xie Z., Zhang Y., Zwaans B.M., Skinner M.E., Lombard D.B., Zhao Y.
    Mol. Cell 50:919-930(2013) [PubMed] [Europe PMC] [Abstract]
    Cited for: SUCCINYLATION [LARGE SCALE ANALYSIS] AT LYS-198, IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS].
    Tissue: Liver.

Entry informationi

Entry nameiRM48_MOUSE
AccessioniPrimary (citable) accession number: Q8JZS9
Secondary accession number(s): Q4VA35
Entry historyi
Integrated into UniProtKB/Swiss-Prot: November 28, 2006
Last sequence update: October 1, 2002
Last modified: May 11, 2016
This is version 92 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. MGD cross-references
    Mouse Genome Database (MGD) cross-references in UniProtKB/Swiss-Prot

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.