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Q8JU67 (Q8JU67_9REOV) Unreviewed, UniProtKB/TrEMBL

Last modified October 16, 2013. Version 36. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
OrganismGrass carp reovirus EMBL AAM92737.1
Taxonomic identifier128987 [NCBI]
Taxonomic lineageVirusesdsRNA virusesReoviridaeSpinareovirinaeAquareovirus

Protein attributes

Sequence length648 AA.
Sequence statusComplete.
Protein existenceEvidence at protein level

Ontologies

Keywords
   Technical term3D-structure PDB 3IYL PDB 3K1Q
Gene Ontology (GO)
   Biological_processpathogenesis

Inferred from electronic annotation. Source: InterPro

viral entry into host cell

Inferred from electronic annotation. Source: InterPro

   Cellular_componentviral outer capsid

Inferred from electronic annotation. Source: InterPro

   Molecular_functionhost cell surface binding

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
Q8JU67 [UniParc].

Last modified October 1, 2002. Version 1.
Checksum: B0EE242233903F4B

FASTA64868,597
        10         20         30         40         50         60 
MGNVQTSVNT YNITGDGNSF TPTSDMTSTA APAIDLKPGV LNPTGKLWRP VGTSVATIDS 

        70         80         90        100        110        120 
LAIVSDRFGQ YSFVNEGMRE TFSKALFDIN MWQPLFQATK TGCGPIVLSS FTTTTSGYVG 

       130        140        150        160        170        180 
ATAGDALDNP VTNGVFISTV QIMNLQRTIA ARMRDVALWQ KHLDTAMTML TPDISAGSAS 

       190        200        210        220        230        240 
CNWKSLLAFA KDILPLDNLC LTYPNEFYNV AIHRYPALKP GNPDTKLPDA QAHPLGEVAG 

       250        260        270        280        290        300 
AFNAATSEVG SLVGSSSTLS QAISTMAGKD LDLIEADTPL PVSVFTPSLA PRSYRPAFIK 

       310        320        330        340        350        360 
PEDAKWIAEF NNSSLIRKTL TYSGATYTVQ LGPGPTRVID MNAMIDSVLT LDVSGTILPY 

       370        380        390        400        410        420 
DTNPDLSTSV PAFVLIQTSV PIQQVTTAAN ITAITVVSAA GASAINLAIN VRGQPRFNML 

       430        440        450        460        470        480 
HLQATFERET ITGIPYIYGL GTFLIPSPTS SSNFSNPTLM DGLLTVTPVL LRETTYKGEV 

       490        500        510        520        530        540 
VDAIVPATVM ANQTSEEVAS ALANDAIVLV SNHLNKLANV VGDAIPVASR TDDSATSAIV 

       550        560        570        580        590        600 
SRLAVQHKLS QVGQASPTPP DYPLLWRRAK RAASMFVSNP SLALQVGIPV LTQSGMLSAL 

       610        620        630        640 
TSGVGTALRT GSLGKGVTDA SEKLRARQSL TVAKQAFFDQ IGSLWPGK 

« Hide

References

[1]"Common evolutionary origin of aquareoviruses and orthoreoviruses revealed by genome characterization of Golden shiner reovirus, Grass carp reovirus, Striped bass reovirus and golden ide reovirus (genus Aquareovirus, family Reoviridae)."
Attoui H., Fang Q., Mohd Jaafar F., Cantaloube J.F., Biagini P., de Micco P., de Lamballerie X.
J. Gen. Virol. 83:1941-1951(2002) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
Strain: GCRV-873 EMBL AAM92737.1.
[2]"3.3 A cryo-EM structure of a nonenveloped virus reveals a priming mechanism for cell entry."
Zhang X., Jin L., Fang Q., Hui W.H., Zhou Z.H.
Cell 141:472-482(2010) [PubMed] [Europe PMC] [Abstract]
Cited for: STRUCTURE BY ELECTRON MICROSCOPY (3.30 ANGSTROMS).
[3]"Backbone model of an aquareovirus virion by cryo-electron microscopy and bioinformatics."
Cheng L., Zhu J., Hui W.H., Zhang X., Honig B., Fang Q., Zhou Z.H.
J. Mol. Biol. 397:852-863(2010) [PubMed] [Europe PMC] [Abstract]
Cited for: STRUCTURE BY ELECTRON MICROSCOPY (4.50 ANGSTROMS) OF 10-648.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AF403392 Genomic RNA. Translation: AAM92737.1.

3D structure databases

PDBe
RCSB PDB
PDBj
EntryMethodResolution (Å)ChainPositionsPDBsum
3IYLelectron microscopy3.30A/B/C/D/E/F/G/H/I/J/K/L/M/N/O/P/Q/R/S/T1-648[»]
3K1Qelectron microscopy4.50I/J/K/O/P/Q/U/V/W/X10-648[»]
ProteinModelPortalQ8JU67.
SMRQ8JU67. Positions 10-42.
ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Family and domain databases

Gene3D1.10.2040.10. 2 hits.
2.60.120.420. 1 hit.
InterProIPR009113. Mu1/VP4.
IPR015962. Mu1_membr_pen_a-bundle_sub2.
IPR015960. Mu1_membr_pen_b-sand_sub.
[Graphical view]
PfamPF05993. Reovirus_M2. 1 hit.
[Graphical view]
SUPFAMSSF69908. SSF69908. 1 hit.
ProtoNetSearch...

Other

EvolutionaryTraceQ8JU67.

Entry information

Entry nameQ8JU67_9REOV
AccessionPrimary (citable) accession number: Q8JU67
Entry history
Integrated into UniProtKB/TrEMBL: October 1, 2002
Last sequence update: October 1, 2002
Last modified: October 16, 2013
This is version 36 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)