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Q8JU67

- Q8JU67_9REOV

UniProt

Q8JU67 - Q8JU67_9REOV

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Protein
Submitted name: Putative outer capsid VP4
Gene
N/A
Organism
Grass carp reovirus
Status
Unreviewed - Annotation score: 1 out of 5 - Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

  1. host cell surface binding Source: InterPro

GO - Biological processi

  1. pathogenesis Source: InterPro
  2. viral entry into host cell Source: InterPro
Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
Putative outer capsid VP4Imported
OrganismiGrass carp reovirusImported
Taxonomic identifieri128987 [NCBI]
Taxonomic lineageiVirusesdsRNA virusesReoviridaeSpinareovirinaeAquareovirus

Subcellular locationi

GO - Cellular componenti

  1. viral outer capsid Source: InterPro
Complete GO annotation...

Structurei

3D structure databases

Select the link destinations:
PDBe
RCSB PDB
PDBj
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
3IYLelectron microscopy3.30A/B/C/D/E/F/G/H/I/J/K/L/M/N/O/P/Q/R/S/T1-648[»]
3K1Qelectron microscopy4.50I/J/K/O/P/Q/U/V/W/X10-648[»]
ProteinModelPortaliQ8JU67.
SMRiQ8JU67. Positions 10-42.

Miscellaneous databases

EvolutionaryTraceiQ8JU67.

Family & Domainsi

Family and domain databases

Gene3Di1.10.2040.10. 2 hits.
2.60.120.420. 1 hit.
InterProiIPR009113. Mu1/VP4.
IPR015962. Mu1_membr_pen_a-bundle_sub2.
IPR015960. Mu1_membr_pen_b-sand_sub.
[Graphical view]
PfamiPF05993. Reovirus_M2. 1 hit.
[Graphical view]
SUPFAMiSSF69908. SSF69908. 1 hit.

Sequencei

Sequence statusi: Complete.

Q8JU67-1 [UniParc]FASTAAdd to Basket

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MGNVQTSVNT YNITGDGNSF TPTSDMTSTA APAIDLKPGV LNPTGKLWRP    50
VGTSVATIDS LAIVSDRFGQ YSFVNEGMRE TFSKALFDIN MWQPLFQATK 100
TGCGPIVLSS FTTTTSGYVG ATAGDALDNP VTNGVFISTV QIMNLQRTIA 150
ARMRDVALWQ KHLDTAMTML TPDISAGSAS CNWKSLLAFA KDILPLDNLC 200
LTYPNEFYNV AIHRYPALKP GNPDTKLPDA QAHPLGEVAG AFNAATSEVG 250
SLVGSSSTLS QAISTMAGKD LDLIEADTPL PVSVFTPSLA PRSYRPAFIK 300
PEDAKWIAEF NNSSLIRKTL TYSGATYTVQ LGPGPTRVID MNAMIDSVLT 350
LDVSGTILPY DTNPDLSTSV PAFVLIQTSV PIQQVTTAAN ITAITVVSAA 400
GASAINLAIN VRGQPRFNML HLQATFERET ITGIPYIYGL GTFLIPSPTS 450
SSNFSNPTLM DGLLTVTPVL LRETTYKGEV VDAIVPATVM ANQTSEEVAS 500
ALANDAIVLV SNHLNKLANV VGDAIPVASR TDDSATSAIV SRLAVQHKLS 550
QVGQASPTPP DYPLLWRRAK RAASMFVSNP SLALQVGIPV LTQSGMLSAL 600
TSGVGTALRT GSLGKGVTDA SEKLRARQSL TVAKQAFFDQ IGSLWPGK 648
Length:648
Mass (Da):68,597
Last modified:October 1, 2002 - v1
Checksum:iB0EE242233903F4B
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AF403392 Genomic RNA. Translation: AAM92737.1.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AF403392 Genomic RNA. Translation: AAM92737.1 .

3D structure databases

Select the link destinations:
PDBe
RCSB PDB
PDBj
Links Updated
Entry Method Resolution (Å) Chain Positions PDBsum
3IYL electron microscopy 3.30 A/B/C/D/E/F/G/H/I/J/K/L/M/N/O/P/Q/R/S/T 1-648 [» ]
3K1Q electron microscopy 4.50 I/J/K/O/P/Q/U/V/W/X 10-648 [» ]
ProteinModelPortali Q8JU67.
SMRi Q8JU67. Positions 10-42.
ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Miscellaneous databases

EvolutionaryTracei Q8JU67.

Family and domain databases

Gene3Di 1.10.2040.10. 2 hits.
2.60.120.420. 1 hit.
InterProi IPR009113. Mu1/VP4.
IPR015962. Mu1_membr_pen_a-bundle_sub2.
IPR015960. Mu1_membr_pen_b-sand_sub.
[Graphical view ]
Pfami PF05993. Reovirus_M2. 1 hit.
[Graphical view ]
SUPFAMi SSF69908. SSF69908. 1 hit.
ProtoNeti Search...

Publicationsi

  1. "Common evolutionary origin of aquareoviruses and orthoreoviruses revealed by genome characterization of Golden shiner reovirus, Grass carp reovirus, Striped bass reovirus and golden ide reovirus (genus Aquareovirus, family Reoviridae)."
    Attoui H., Fang Q., Mohd Jaafar F., Cantaloube J.F., Biagini P., de Micco P., de Lamballerie X.
    J. Gen. Virol. 83:1941-1951(2002) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: GCRV-873Imported.
  2. "3.3 A cryo-EM structure of a nonenveloped virus reveals a priming mechanism for cell entry."
    Zhang X., Jin L., Fang Q., Hui W.H., Zhou Z.H.
    Cell 141:472-482(2010) [PubMed] [Europe PMC] [Abstract]
    Cited for: STRUCTURE BY ELECTRON MICROSCOPY (3.30 ANGSTROMS).
  3. "Backbone model of an aquareovirus virion by cryo-electron microscopy and bioinformatics."
    Cheng L., Zhu J., Hui W.H., Zhang X., Honig B., Fang Q., Zhou Z.H.
    J. Mol. Biol. 397:852-863(2010) [PubMed] [Europe PMC] [Abstract]
    Cited for: STRUCTURE BY ELECTRON MICROSCOPY (4.50 ANGSTROMS) OF 10-648.

Entry informationi

Entry nameiQ8JU67_9REOV
AccessioniPrimary (citable) accession number: Q8JU67
Entry historyi
Integrated into UniProtKB/TrEMBL: October 1, 2002
Last sequence update: October 1, 2002
Last modified: October 16, 2013
This is version 36 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

3D-structureImported

External Data

Dasty 3

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