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Q8JU67

- Q8JU67_9REOV

UniProt

Q8JU67 - Q8JU67_9REOV

Protein
Submitted name:

Putative outer capsid VP4

Gene
N/A
Organism
Grass carp reovirus
Status
Unreviewed - Annotation score: 1 out of 5- Experimental evidence at protein leveli
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    • History
      Entry version 37 (01 Oct 2014)
      Sequence version 1 (01 Oct 2002)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. host cell surface binding Source: InterPro

    GO - Biological processi

    1. pathogenesis Source: InterPro
    2. viral entry into host cell Source: InterPro

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    Putative outer capsid VP4Imported
    OrganismiGrass carp reovirusImported
    Taxonomic identifieri128987 [NCBI]
    Taxonomic lineageiVirusesdsRNA virusesReoviridaeSpinareovirinaeAquareovirus

    Subcellular locationi

    GO - Cellular componenti

    1. viral outer capsid Source: InterPro

    Structurei

    3D structure databases

    Select the link destinations:
    PDBe
    RCSB PDB
    PDBj
    Links Updated
    EntryMethodResolution (Å)ChainPositionsPDBsum
    3IYLelectron microscopy3.30A/B/C/D/E/F/G/H/I/J/K/L/M/N/O/P/Q/R/S/T1-648[»]
    3K1Qelectron microscopy4.50I/J/K/O/P/Q/U/V/W/X10-648[»]
    ProteinModelPortaliQ8JU67.
    SMRiQ8JU67. Positions 10-42.
    ModBaseiSearch...
    MobiDBiSearch...

    Miscellaneous databases

    EvolutionaryTraceiQ8JU67.

    Family & Domainsi

    Family and domain databases

    Gene3Di1.10.2040.10. 2 hits.
    2.60.120.420. 1 hit.
    InterProiIPR009113. Mu1/VP4.
    IPR015962. Mu1_membr_pen_a-bundle_sub2.
    IPR015960. Mu1_membr_pen_b-sand_sub.
    [Graphical view]
    PfamiPF05993. Reovirus_M2. 1 hit.
    [Graphical view]
    SUPFAMiSSF69908. SSF69908. 1 hit.

    Sequencei

    Sequence statusi: Complete.

    Q8JU67-1 [UniParc]FASTAAdd to Basket

    « Hide

    MGNVQTSVNT YNITGDGNSF TPTSDMTSTA APAIDLKPGV LNPTGKLWRP    50
    VGTSVATIDS LAIVSDRFGQ YSFVNEGMRE TFSKALFDIN MWQPLFQATK 100
    TGCGPIVLSS FTTTTSGYVG ATAGDALDNP VTNGVFISTV QIMNLQRTIA 150
    ARMRDVALWQ KHLDTAMTML TPDISAGSAS CNWKSLLAFA KDILPLDNLC 200
    LTYPNEFYNV AIHRYPALKP GNPDTKLPDA QAHPLGEVAG AFNAATSEVG 250
    SLVGSSSTLS QAISTMAGKD LDLIEADTPL PVSVFTPSLA PRSYRPAFIK 300
    PEDAKWIAEF NNSSLIRKTL TYSGATYTVQ LGPGPTRVID MNAMIDSVLT 350
    LDVSGTILPY DTNPDLSTSV PAFVLIQTSV PIQQVTTAAN ITAITVVSAA 400
    GASAINLAIN VRGQPRFNML HLQATFERET ITGIPYIYGL GTFLIPSPTS 450
    SSNFSNPTLM DGLLTVTPVL LRETTYKGEV VDAIVPATVM ANQTSEEVAS 500
    ALANDAIVLV SNHLNKLANV VGDAIPVASR TDDSATSAIV SRLAVQHKLS 550
    QVGQASPTPP DYPLLWRRAK RAASMFVSNP SLALQVGIPV LTQSGMLSAL 600
    TSGVGTALRT GSLGKGVTDA SEKLRARQSL TVAKQAFFDQ IGSLWPGK 648
    Length:648
    Mass (Da):68,597
    Last modified:October 1, 2002 - v1
    Checksum:iB0EE242233903F4B
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AF403392 Genomic RNA. Translation: AAM92737.1.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AF403392 Genomic RNA. Translation: AAM92737.1 .

    3D structure databases

    Select the link destinations:
    PDBe
    RCSB PDB
    PDBj
    Links Updated
    Entry Method Resolution (Å) Chain Positions PDBsum
    3IYL electron microscopy 3.30 A/B/C/D/E/F/G/H/I/J/K/L/M/N/O/P/Q/R/S/T 1-648 [» ]
    3K1Q electron microscopy 4.50 I/J/K/O/P/Q/U/V/W/X 10-648 [» ]
    ProteinModelPortali Q8JU67.
    SMRi Q8JU67. Positions 10-42.
    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Miscellaneous databases

    EvolutionaryTracei Q8JU67.

    Family and domain databases

    Gene3Di 1.10.2040.10. 2 hits.
    2.60.120.420. 1 hit.
    InterProi IPR009113. Mu1/VP4.
    IPR015962. Mu1_membr_pen_a-bundle_sub2.
    IPR015960. Mu1_membr_pen_b-sand_sub.
    [Graphical view ]
    Pfami PF05993. Reovirus_M2. 1 hit.
    [Graphical view ]
    SUPFAMi SSF69908. SSF69908. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. "Common evolutionary origin of aquareoviruses and orthoreoviruses revealed by genome characterization of Golden shiner reovirus, Grass carp reovirus, Striped bass reovirus and golden ide reovirus (genus Aquareovirus, family Reoviridae)."
      Attoui H., Fang Q., Mohd Jaafar F., Cantaloube J.F., Biagini P., de Micco P., de Lamballerie X.
      J. Gen. Virol. 83:1941-1951(2002) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE.
      Strain: GCRV-873Imported.
    2. "3.3 A cryo-EM structure of a nonenveloped virus reveals a priming mechanism for cell entry."
      Zhang X., Jin L., Fang Q., Hui W.H., Zhou Z.H.
      Cell 141:472-482(2010) [PubMed] [Europe PMC] [Abstract]
      Cited for: STRUCTURE BY ELECTRON MICROSCOPY (3.30 ANGSTROMS).
    3. "Backbone model of an aquareovirus virion by cryo-electron microscopy and bioinformatics."
      Cheng L., Zhu J., Hui W.H., Zhang X., Honig B., Fang Q., Zhou Z.H.
      J. Mol. Biol. 397:852-863(2010) [PubMed] [Europe PMC] [Abstract]
      Cited for: STRUCTURE BY ELECTRON MICROSCOPY (4.50 ANGSTROMS) OF 10-648.

    Entry informationi

    Entry nameiQ8JU67_9REOV
    AccessioniPrimary (citable) accession number: Q8JU67
    Entry historyi
    Integrated into UniProtKB/TrEMBL: October 1, 2002
    Last sequence update: October 1, 2002
    Last modified: October 1, 2014
    This is version 37 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    3D-structureImported

    External Data

    Dasty 3