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Q8JU64

- Q8JU64_9REOV

UniProt

Q8JU64 - Q8JU64_9REOV

Protein
Submitted name:

Core protein VP6

Gene
N/A
Organism
Grass carp reovirus
Status
Unreviewed - Annotation score: 1 out of 5- Experimental evidence at protein leveli
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    • History
      Entry version 33 (01 Oct 2014)
      Sequence version 1 (01 Oct 2002)
      Previous versions | rss
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    Names & Taxonomyi

    Protein namesi
    Submitted name:
    Core protein VP6Imported
    OrganismiGrass carp reovirusImported
    Taxonomic identifieri128987 [NCBI]
    Taxonomic lineageiVirusesdsRNA virusesReoviridaeSpinareovirinaeAquareovirus

    Structurei

    3D structure databases

    Select the link destinations:
    PDBe
    RCSB PDB
    PDBj
    Links Updated
    EntryMethodResolution (Å)ChainPositionsPDBsum
    3IYLelectron microscopy3.30U/V1-412[»]
    3K1Qelectron microscopy4.50D/E1-412[»]
    ProteinModelPortaliQ8JU64.
    ModBaseiSearch...
    MobiDBiSearch...

    Miscellaneous databases

    EvolutionaryTraceiQ8JU64.

    Family & Domainsi

    Family and domain databases

    InterProiIPR004317. Sigma_1_2_reovir.
    [Graphical view]
    PfamiPF03084. Sigma_1_2. 1 hit.
    [Graphical view]
    ProDomiPD004419. Sigma_1_2_reovir. 1 hit.
    [Graphical view] [Entries sharing at least one domain]

    Sequencei

    Sequence statusi: Complete.

    Q8JU64-1 [UniParc]FASTAAdd to Basket

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    MAQRQFFGLT YNFYGQPAPL FDLNDLQELA GCYARPWTSR FSHLAISTGS    50
    LPVWSARYPS VASRNIVVNT LLGAHLNPFA GGQITSHQGI TWRDPVLSSL 100
    APVPAIQPPP VWAVAENVLL DSNNYPTYVL NLSSMWPINQ DVHIMTMWAL 150
    SDQGPIYHLE VPVDPMPAAT TAALMAYTGV PIAHLAQTAY RFAGQLPQSP 200
    DSTMVSTIRW LSAIWFGSLT GRLNRSRTCN GFYFEFAKPA LNPDQAVLKW 250
    NDGARAAPPA AAQSSYIRCI SPHWQHQIVE VAGALMSQSV TAVTGLPALI 300
    DEATLPAWSQ GVANLTGNGQ GVVPCLDYNP VPMAAARHLQ WRQDGLITAA 350
    QEAQLNNDYT AYALTIERHL TAMLVANPIA AGRMPIQPFN AADFGQAGQT 400
    AAAVALAQAM FV 412
    Length:412
    Mass (Da):44,578
    Last modified:October 1, 2002 - v1
    Checksum:i59E8449403C9644F
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AF403394 Genomic RNA. Translation: AAM92740.1.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AF403394 Genomic RNA. Translation: AAM92740.1 .

    3D structure databases

    Select the link destinations:
    PDBe
    RCSB PDB
    PDBj
    Links Updated
    Entry Method Resolution (Å) Chain Positions PDBsum
    3IYL electron microscopy 3.30 U/V 1-412 [» ]
    3K1Q electron microscopy 4.50 D/E 1-412 [» ]
    ProteinModelPortali Q8JU64.
    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Miscellaneous databases

    EvolutionaryTracei Q8JU64.

    Family and domain databases

    InterProi IPR004317. Sigma_1_2_reovir.
    [Graphical view ]
    Pfami PF03084. Sigma_1_2. 1 hit.
    [Graphical view ]
    ProDomi PD004419. Sigma_1_2_reovir. 1 hit.
    [Graphical view ] [Entries sharing at least one domain ]
    ProtoNeti Search...

    Publicationsi

    1. "Common evolutionary origin of aquareoviruses and orthoreoviruses revealed by genome characterization of Golden shiner reovirus, Grass carp reovirus, Striped bass reovirus and golden ide reovirus (genus Aquareovirus, family Reoviridae)."
      Attoui H., Fang Q., Mohd Jaafar F., Cantaloube J.F., Biagini P., de Micco P., de Lamballerie X.
      J. Gen. Virol. 83:1941-1951(2002) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE.
      Strain: GCRV-873Imported.
    2. "3.3 A cryo-EM structure of a nonenveloped virus reveals a priming mechanism for cell entry."
      Zhang X., Jin L., Fang Q., Hui W.H., Zhou Z.H.
      Cell 141:472-482(2010) [PubMed] [Europe PMC] [Abstract]
      Cited for: STRUCTURE BY ELECTRON MICROSCOPY (3.30 ANGSTROMS).
    3. "Backbone model of an aquareovirus virion by cryo-electron microscopy and bioinformatics."
      Cheng L., Zhu J., Hui W.H., Zhang X., Honig B., Fang Q., Zhou Z.H.
      J. Mol. Biol. 397:852-863(2010) [PubMed] [Europe PMC] [Abstract]
      Cited for: STRUCTURE BY ELECTRON MICROSCOPY (4.50 ANGSTROMS).

    Entry informationi

    Entry nameiQ8JU64_9REOV
    AccessioniPrimary (citable) accession number: Q8JU64
    Entry historyi
    Integrated into UniProtKB/TrEMBL: October 1, 2002
    Last sequence update: October 1, 2002
    Last modified: October 1, 2014
    This is version 33 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    3D-structureImported

    External Data

    Dasty 3