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Q8JU64 (Q8JU64_9REOV) Unreviewed, UniProtKB/TrEMBL

Last modified July 24, 2013. Version 32. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
OrganismGrass carp reovirus EMBL AAM92740.1
Taxonomic identifier128987 [NCBI]
Taxonomic lineageVirusesdsRNA virusesReoviridaeSpinareovirinaeAquareovirus

Protein attributes

Sequence length412 AA.
Sequence statusComplete.
Protein existenceEvidence at protein level

Ontologies

Keywords
   Technical term3D-structure PDB 3IYL PDB 3K1Q
Gene Ontology (GO)
None. [Check GOA]

Sequences

Sequence LengthMass (Da)Tools
Q8JU64 [UniParc].

Last modified October 1, 2002. Version 1.
Checksum: 59E8449403C9644F

FASTA41244,578
        10         20         30         40         50         60 
MAQRQFFGLT YNFYGQPAPL FDLNDLQELA GCYARPWTSR FSHLAISTGS LPVWSARYPS 

        70         80         90        100        110        120 
VASRNIVVNT LLGAHLNPFA GGQITSHQGI TWRDPVLSSL APVPAIQPPP VWAVAENVLL 

       130        140        150        160        170        180 
DSNNYPTYVL NLSSMWPINQ DVHIMTMWAL SDQGPIYHLE VPVDPMPAAT TAALMAYTGV 

       190        200        210        220        230        240 
PIAHLAQTAY RFAGQLPQSP DSTMVSTIRW LSAIWFGSLT GRLNRSRTCN GFYFEFAKPA 

       250        260        270        280        290        300 
LNPDQAVLKW NDGARAAPPA AAQSSYIRCI SPHWQHQIVE VAGALMSQSV TAVTGLPALI 

       310        320        330        340        350        360 
DEATLPAWSQ GVANLTGNGQ GVVPCLDYNP VPMAAARHLQ WRQDGLITAA QEAQLNNDYT 

       370        380        390        400        410 
AYALTIERHL TAMLVANPIA AGRMPIQPFN AADFGQAGQT AAAVALAQAM FV 

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References

[1]"Common evolutionary origin of aquareoviruses and orthoreoviruses revealed by genome characterization of Golden shiner reovirus, Grass carp reovirus, Striped bass reovirus and golden ide reovirus (genus Aquareovirus, family Reoviridae)."
Attoui H., Fang Q., Mohd Jaafar F., Cantaloube J.F., Biagini P., de Micco P., de Lamballerie X.
J. Gen. Virol. 83:1941-1951(2002) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
Strain: GCRV-873 EMBL AAM92740.1.
[2]"3.3 A cryo-EM structure of a nonenveloped virus reveals a priming mechanism for cell entry."
Zhang X., Jin L., Fang Q., Hui W.H., Zhou Z.H.
Cell 141:472-482(2010) [PubMed] [Europe PMC] [Abstract]
Cited for: STRUCTURE BY ELECTRON MICROSCOPY (3.30 ANGSTROMS).
[3]"Backbone model of an aquareovirus virion by cryo-electron microscopy and bioinformatics."
Cheng L., Zhu J., Hui W.H., Zhang X., Honig B., Fang Q., Zhou Z.H.
J. Mol. Biol. 397:852-863(2010) [PubMed] [Europe PMC] [Abstract]
Cited for: STRUCTURE BY ELECTRON MICROSCOPY (4.50 ANGSTROMS).

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AF403394 Genomic RNA. Translation: AAM92740.1.

3D structure databases

PDBe
RCSB PDB
PDBj
EntryMethodResolution (Å)ChainPositionsPDBsum
3IYLelectron microscopy3.30U/V1-412[»]
3K1Qelectron microscopy4.50D/E1-412[»]
ProteinModelPortalQ8JU64.
ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Family and domain databases

InterProIPR004317. Sigma_1_2_reovir.
[Graphical view]
PfamPF03084. Sigma_1_2. 1 hit.
[Graphical view]
ProDomPD004419. Sigma_1_2_reovir. 1 hit.
[Graphical view] [Entries sharing at least one domain]
ProtoNetSearch...

Other

EvolutionaryTraceQ8JU64.

Entry information

Entry nameQ8JU64_9REOV
AccessionPrimary (citable) accession number: Q8JU64
Entry history
Integrated into UniProtKB/TrEMBL: October 1, 2002
Last sequence update: October 1, 2002
Last modified: July 24, 2013
This is version 32 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)