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Q8JU64

- Q8JU64_9REOV

UniProt

Q8JU64 - Q8JU64_9REOV

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Protein
Submitted name:

Core protein VP6

Gene
N/A
Organism
Grass carp reovirus
Status
Unreviewed - Annotation score: 1 out of 5- Experimental evidence at protein leveli

Names & Taxonomyi

Protein namesi
Submitted name:
Core protein VP6Imported
OrganismiGrass carp reovirusImported
Taxonomic identifieri128987 [NCBI]
Taxonomic lineageiVirusesdsRNA virusesReoviridaeSpinareovirinaeAquareovirus

Structurei

3D structure databases

Select the link destinations:
PDBe
RCSB PDB
PDBj
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
3IYLelectron microscopy3.30U/V1-412[»]
3K1Qelectron microscopy4.50D/E1-412[»]
ProteinModelPortaliQ8JU64.
ModBaseiSearch...
MobiDBiSearch...

Miscellaneous databases

EvolutionaryTraceiQ8JU64.

Family & Domainsi

Family and domain databases

InterProiIPR004317. Sigma_1_2_reovir.
[Graphical view]
PfamiPF03084. Sigma_1_2. 1 hit.
[Graphical view]
ProDomiPD004419. Sigma_1_2_reovir. 1 hit.
[Graphical view] [Entries sharing at least one domain]

Sequencei

Sequence statusi: Complete.

Q8JU64-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MAQRQFFGLT YNFYGQPAPL FDLNDLQELA GCYARPWTSR FSHLAISTGS
60 70 80 90 100
LPVWSARYPS VASRNIVVNT LLGAHLNPFA GGQITSHQGI TWRDPVLSSL
110 120 130 140 150
APVPAIQPPP VWAVAENVLL DSNNYPTYVL NLSSMWPINQ DVHIMTMWAL
160 170 180 190 200
SDQGPIYHLE VPVDPMPAAT TAALMAYTGV PIAHLAQTAY RFAGQLPQSP
210 220 230 240 250
DSTMVSTIRW LSAIWFGSLT GRLNRSRTCN GFYFEFAKPA LNPDQAVLKW
260 270 280 290 300
NDGARAAPPA AAQSSYIRCI SPHWQHQIVE VAGALMSQSV TAVTGLPALI
310 320 330 340 350
DEATLPAWSQ GVANLTGNGQ GVVPCLDYNP VPMAAARHLQ WRQDGLITAA
360 370 380 390 400
QEAQLNNDYT AYALTIERHL TAMLVANPIA AGRMPIQPFN AADFGQAGQT
410
AAAVALAQAM FV
Length:412
Mass (Da):44,578
Last modified:October 1, 2002 - v1
Checksum:i59E8449403C9644F
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AF403394 Genomic RNA. Translation: AAM92740.1.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AF403394 Genomic RNA. Translation: AAM92740.1 .

3D structure databases

Select the link destinations:
PDBe
RCSB PDB
PDBj
Links Updated
Entry Method Resolution (Å) Chain Positions PDBsum
3IYL electron microscopy 3.30 U/V 1-412 [» ]
3K1Q electron microscopy 4.50 D/E 1-412 [» ]
ProteinModelPortali Q8JU64.
ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Miscellaneous databases

EvolutionaryTracei Q8JU64.

Family and domain databases

InterProi IPR004317. Sigma_1_2_reovir.
[Graphical view ]
Pfami PF03084. Sigma_1_2. 1 hit.
[Graphical view ]
ProDomi PD004419. Sigma_1_2_reovir. 1 hit.
[Graphical view ] [Entries sharing at least one domain ]
ProtoNeti Search...

Publicationsi

  1. "Common evolutionary origin of aquareoviruses and orthoreoviruses revealed by genome characterization of Golden shiner reovirus, Grass carp reovirus, Striped bass reovirus and golden ide reovirus (genus Aquareovirus, family Reoviridae)."
    Attoui H., Fang Q., Mohd Jaafar F., Cantaloube J.F., Biagini P., de Micco P., de Lamballerie X.
    J. Gen. Virol. 83:1941-1951(2002) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: GCRV-873Imported.
  2. "3.3 A cryo-EM structure of a nonenveloped virus reveals a priming mechanism for cell entry."
    Zhang X., Jin L., Fang Q., Hui W.H., Zhou Z.H.
    Cell 141:472-482(2010) [PubMed] [Europe PMC] [Abstract]
    Cited for: STRUCTURE BY ELECTRON MICROSCOPY (3.30 ANGSTROMS).
  3. "Backbone model of an aquareovirus virion by cryo-electron microscopy and bioinformatics."
    Cheng L., Zhu J., Hui W.H., Zhang X., Honig B., Fang Q., Zhou Z.H.
    J. Mol. Biol. 397:852-863(2010) [PubMed] [Europe PMC] [Abstract]
    Cited for: STRUCTURE BY ELECTRON MICROSCOPY (4.50 ANGSTROMS).

Entry informationi

Entry nameiQ8JU64_9REOV
AccessioniPrimary (citable) accession number: Q8JU64
Entry historyi
Integrated into UniProtKB/TrEMBL: October 1, 2002
Last sequence update: October 1, 2002
Last modified: October 1, 2014
This is version 33 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

3D-structureImported

External Data

Dasty 3