Q8JU64 (Q8JU64_9REOV) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names	Submitted name: Core protein VP6 EMBL AAM92740.1
Organism	Grass carp reovirus EMBL AAM92740.1
Taxonomic identifier	128987 [NCBI]
Taxonomic lineage	Viruses › dsRNA viruses › Reoviridae › Spinareovirinae › Aquareovirus › Aquareovirus C

Protein attributes

Sequence length	412 AA.
Sequence status	Complete.
Protein existence	Evidence at protein level

Ontologies

Keywords
Technical term	3D-structure PDB 3IYL PDB 3K1Q
Gene Ontology (GO)
None. [Check GOA]

Sequences

	Sequence		Length	Mass (Da)
	Q8JU64 [UniParc]. Last modified October 1, 2002. Version 1. Checksum: 59E8449403C9644F	FASTA	412	44,578
	10 20 30 40 50 60 MAQRQFFGLT YNFYGQPAPL FDLNDLQELA GCYARPWTSR FSHLAISTGS LPVWSARYPS 70 80 90 100 110 120 VASRNIVVNT LLGAHLNPFA GGQITSHQGI TWRDPVLSSL APVPAIQPPP VWAVAENVLL 130 140 150 160 170 180 DSNNYPTYVL NLSSMWPINQ DVHIMTMWAL SDQGPIYHLE VPVDPMPAAT TAALMAYTGV 190 200 210 220 230 240 PIAHLAQTAY RFAGQLPQSP DSTMVSTIRW LSAIWFGSLT GRLNRSRTCN GFYFEFAKPA 250 260 270 280 290 300 LNPDQAVLKW NDGARAAPPA AAQSSYIRCI SPHWQHQIVE VAGALMSQSV TAVTGLPALI 310 320 330 340 350 360 DEATLPAWSQ GVANLTGNGQ GVVPCLDYNP VPMAAARHLQ WRQDGLITAA QEAQLNNDYT 370 380 390 400 410 AYALTIERHL TAMLVANPIA AGRMPIQPFN AADFGQAGQT AAAVALAQAM FV

References

[1]	"Common evolutionary origin of aquareoviruses and orthoreoviruses revealed by genome characterization of Golden shiner reovirus, Grass carp reovirus, Striped bass reovirus and golden ide reovirus (genus Aquareovirus, family Reoviridae)." Attoui H., Fang Q., Mohd Jaafar F., Cantaloube J.F., Biagini P., de Micco P., de Lamballerie X. J. Gen. Virol. 83:1941-1951(2002) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE. Strain: GCRV-873 EMBL AAM92740.1.
[2]	"3.3 A cryo-EM structure of a nonenveloped virus reveals a priming mechanism for cell entry." Zhang X., Jin L., Fang Q., Hui W.H., Zhou Z.H. Cell 141:472-482(2010) [PubMed] [Europe PMC] [Abstract] Cited for: STRUCTURE BY ELECTRON MICROSCOPY (3.30 ANGSTROMS).
[3]	"Backbone model of an aquareovirus virion by cryo-electron microscopy and bioinformatics." Cheng L., Zhu J., Hui W.H., Zhang X., Honig B., Fang Q., Zhou Z.H. J. Mol. Biol. 397:852-863(2010) [PubMed] [Europe PMC] [Abstract] Cited for: STRUCTURE BY ELECTRON MICROSCOPY (4.50 ANGSTROMS).

Cross-references

Sequence databases

EMBL
GenBank
DDBJ

AF403394 Genomic RNA. Translation: AAM92740.1.

3D structure databases

PDBe
RCSB PDB
PDBj

Entry	Method	Resolution (Å)	Chain	Positions	PDBsum
3IYL	electron microscopy	3.30	U/V	1-412	[»]
3K1Q	electron microscopy	4.50	D/E	1-412	[»]

ProteinModelPortal

Q8JU64.

ModBase

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Protocols and materials databases

StructuralBiologyKnowledgebase

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Family and domain databases

InterPro

IPR004317. Sigma_1_2_reovir.
[Graphical view]

Pfam

PF03084. Sigma_1_2. 1 hit.
[Graphical view]

ProDom

PD004419. Sigma_1_2_reovir. 1 hit.
[Graphical view] [Entries sharing at least one domain]

ProtoNet

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Other

EvolutionaryTrace

Q8JU64.

Entry information

Entry name

Q8JU64_9REOV

Accession

Primary (citable) accession number: Q8JU64

Entry history

Integrated into UniProtKB/TrEMBL:	October 1, 2002
Last sequence update:	October 1, 2002
Last modified:	April 3, 2013
This is version 30 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)