Unreviewed, UniProtKB/TrEMBL Q8JQ94 (Q8JQ94_9PARA)

Names and origin

Protein names	Submitted name:     Hemagglutinin EMBL AAM61886.1
Organism	Avian paramyxovirus 2 EMBL AAM61886.1
Taxonomic identifier	35302 [NCBI]
Taxonomic lineage	Viruses › ssRNA negative-strand viruses › Mononegavirales › Paramyxoviridae › Paramyxovirinae › Avulavirus

Protein attributes

Sequence length	580 AA.
Sequence status	Complete.
Sequence processing	The displayed sequence is not processed.
Protein existence	Inferred from homology.

General annotation (Comments)

Sequence similarities

Belongs to the paramyxoviruses hemagglutinin-neuraminidase family. RuleBase RU004216V0

Ontologies

Keywords
Cellular component	Envelope protein RuleBase RU004216V0 Spearmint SPM000665 Membrane Virion
Domain	Transmembrane Spearmint SPM000665
Molecular function	Hemagglutinin RuleBase RU004216V0 Spearmint SPM000665
Gene Ontology (GO)
Biological process	viral infectious cycle Inferred from electronic annotation. Source: InterPro
Cellular component	integral to membrane Inferred from electronic annotation. Source: UniProtKB-KW viral envelope Inferred from electronic annotation. Source: InterPro
Molecular function	exo-alpha-sialidase activity Inferred from electronic annotation. Source: InterPro host cell surface receptor binding Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q8JQ94-1 [UniParc]. Last modified October 1, 2002. Version 1. Checksum: 9C44437827BB9CAF	FASTA	580	63,880
	10 20 30 40 50 60 MDFPSRENLA AGDISGRKTW RLLFRILTLS IGVVCLAINI ATIAKLDHLD NMASNTWTTT 70 80 90 100 110 120 EADRVISSIT TPLKVPVNQI NDMFRIVALD LPLQMTSLQK EITSQVGFLA ESINNVLSKN 130 140 150 160 170 180 GSAGLVLVND PEYAGGIAVS LYQGDASAGL NFQPISLIEH PSFVPGPTTA KGCIRIPTFH 190 200 210 220 230 240 MGPSHWCYSH NIIASGCQDA SHSSMYISLG VLKASQTGSP IFLTTASQLV DDNINRKSCS 250 260 270 280 290 300 IVASKYGCDI LCSIVIETEN EDYRSDPATS MIIGRLFFNG SYTESKINTG SIFSLFSANY 310 320 330 340 350 360 PAVGSGIVVG DEAAFPIYGG VKQNTWLFNQ LKDFGYFTHN DVYKCNRTDI QQTILDAYRP 370 380 390 400 410 420 PKISGRLWVQ GILLCPVSLR PDPGCRLKVF NTSNVMMGAE ARLIQVGSTV YLYQRSSSWW 430 440 450 460 470 480 VVGLTYKLDV SEITSQTGNT LNHVDPIAHT KFPRPSFRRD ACARPNICPA VCVSGVYQDI 490 500 510 520 530 540 WPISTATNNS NIVWVGQYLE AFYSRKDPRI GIATQYEWKV TNQLFNSNTE GGYSTTTCFR 550 560 570 580 NTKRDKAYCV VISEYADGVF GSYRIVPQLI EIRTTTGKSE

References

[1]	"Isolation, identification, and comparison of four isolates of avian paramyxovirus serotype 2 in China." Zhang G.Z., Zhao J.X., Wang H.W., Yang A.M., Bu C.Y., Wang M. Avian Dis. 50:386-390(2006) [PubMed: 17039838] [Abstract] Cited for: NUCLEOTIDE SEQUENCE. Strain: PMV-2 EMBL AAM61886.1.
[2]	"Sequencing and analysis of four strains of avian paramyxovirus-2." Yang A., Zhao J., Zhao X., Zhang G., Bu C. Submitted (MAY-2002) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE. Strain: PMV-2 EMBL AAM61886.1.

Cross-references

Sequence databases
EMBLGenBankDDBJ	AF515838 Genomic RNA. Translation: AAM61886.1.
3D structure databases
HSSP	HSSP built from PDB template 1USR based on UniProtKB P32884.
ModBase	Search...
Protein family/group databases
CAZy	GH83. Glycoside Hydrolase Family 83.
Family and domain databases
InterPro	IPR000665. Hemagglutn-neuramid_glycoprot. IPR016285. Hemagglutn-neuramid_paramyxo. [Graphical view]
Pfam	PF00423. HN. 1 hit. [Graphical view]
PIRSF	PIRSF001072. Hemagglut-neuramid_paramyxoV. 1 hit.
ProtoNet	Search...

Entry information

Entry name

Q8JQ94_9PARA

Accession

Primary (citable) accession number: Q8JQ94

Entry history

Integrated into UniProtKB/TrEMBL:	October 1, 2002
Last sequence update:	October 1, 2002
Last modified:	May 5, 2009
This is version 37 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)