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Q8JN59

- VP2_BECNB

UniProt

Q8JN59 - VP2_BECNB

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Protein
Protein VP2
Gene
ORF2
Organism
Bovine enteric calicivirus NB (isolate Bovine/United States/Nebraska/1980) (BEC-NB)
Status
Reviewed - Annotation score: 2 out of 5 - Protein inferred from homologyi

Functioni

Minor structural protein present in one or two copies per virion. Does not seem to play a role in capsid assembly, but is essential for production of infectious virus By similarity.

Names & Taxonomyi

Protein namesi
Recommended name:
Protein VP2
Alternative name(s):
Minor capsid protein
Gene namesi
ORF Names:ORF2
OrganismiBovine enteric calicivirus NB (isolate Bovine/United States/Nebraska/1980) (BEC-NB)
Taxonomic identifieri190239 [NCBI]
Taxonomic lineageiVirusesssRNA positive-strand viruses, no DNA stageCaliciviridaeNebovirus
Virus hostiBos taurus (Bovine) [TaxID: 9913]
ProteomesiUP000008174: Genome

Subcellular locationi

Virion. Host cytoplasm By similarity

GO - Cellular componenti

  1. host cell cytoplasm Source: UniProtKB-SubCell
  2. virion Source: UniProtKB-SubCell
Complete GO annotation...

Keywords - Cellular componenti

Host cytoplasm, Virion

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 225225Protein VP2
PRO_0000341649Add
BLAST

Interactioni

Subunit structurei

May interact with capsid protein By similarity.

Sequencei

Sequence statusi: Complete.

Q8JN59-1 [UniParc]FASTAAdd to Basket

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MASAATAGLT LLSGGAGIAA DIASIVTEQQ RLALQKEQIR NNYELGKQTL    50
SLQQQAMENS RDRIRLSAAQ IKELGLDPKS ELSMIMGLTA GAQPSISAPI 100
SSEQLFLNSS NLARSVRWDA RNFGEAINTF AGLRAKHQAN PSRPDMMLGS 150
DNPNWGARVT GDALSVSGLS VRSNHFGSGS SSLGSLSSVR TNPFSSVSSG 200
SVGGISLRTV GSRPSIRSVF STTSV 225
Length:225
Mass (Da):23,552
Last modified:October 1, 2002 - v1
Checksum:iC37A55E7555FEE58
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AY082891 Genomic RNA. Translation: AAL99278.1.
RefSeqiNP_663316.1. NC_004064.1.

Genome annotation databases

GeneIDi951160.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AY082891 Genomic RNA. Translation: AAL99278.1 .
RefSeqi NP_663316.1. NC_004064.1.

3D structure databases

ModBasei Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

GeneIDi 951160.

Family and domain databases

ProtoNeti Search...

Publicationsi

  1. "Characterization of an enteropathogenic bovine calicivirus representing a potentially new calicivirus genus."
    Smiley J.R., Chang K.O., Hayes J., Vinje J., Saif L.J.
    J. Virol. 76:10089-10098(2002) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [GENOMIC RNA].

Entry informationi

Entry nameiVP2_BECNB
AccessioniPrimary (citable) accession number: Q8JN59
Entry historyi
Integrated into UniProtKB/Swiss-Prot: July 1, 2008
Last sequence update: October 1, 2002
Last modified: May 29, 2013
This is version 26 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programViral Protein Annotation Program

Miscellaneousi

Miscellaneous

Translated by a ribosomal terminaition-reinitiation process from the bicistronic mRNA coding for VP1 and VP2 By similarity.

Keywords - Technical termi

Complete proteome

External Data

Dasty 3

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