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Q8JN59

- VP2_BECNB

UniProt

Q8JN59 - VP2_BECNB

Protein

Protein VP2

Gene

ORF2

Organism
Bovine enteric calicivirus NB (isolate Bovine/United States/Nebraska/1980) (BEC-NB)
Status
Reviewed - Annotation score: 2 out of 5- Protein inferred from homologyi
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    • History
      Entry version 27 (01 Oct 2014)
      Sequence version 1 (01 Oct 2002)
      Previous versions | rss
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    Functioni

    Minor structural protein present in one or two copies per virion. Does not seem to play a role in capsid assembly, but is essential for production of infectious virus By similarity.By similarity

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Protein VP2
    Alternative name(s):
    Minor capsid protein
    Gene namesi
    ORF Names:ORF2
    OrganismiBovine enteric calicivirus NB (isolate Bovine/United States/Nebraska/1980) (BEC-NB)
    Taxonomic identifieri190239 [NCBI]
    Taxonomic lineageiVirusesssRNA positive-strand viruses, no DNA stageCaliciviridaeNebovirus
    Virus hostiBos taurus (Bovine) [TaxID: 9913]
    ProteomesiUP000008174: Genome

    Subcellular locationi

    Virion. Host cytoplasm By similarity

    GO - Cellular componenti

    1. host cell cytoplasm Source: UniProtKB-SubCell
    2. virion Source: UniProtKB-SubCell

    Keywords - Cellular componenti

    Host cytoplasm, Virion

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Chaini1 – 225225Protein VP2PRO_0000341649Add
    BLAST

    Interactioni

    Subunit structurei

    May interact with capsid protein.By similarity

    Sequencei

    Sequence statusi: Complete.

    Q8JN59-1 [UniParc]FASTAAdd to Basket

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    MASAATAGLT LLSGGAGIAA DIASIVTEQQ RLALQKEQIR NNYELGKQTL    50
    SLQQQAMENS RDRIRLSAAQ IKELGLDPKS ELSMIMGLTA GAQPSISAPI 100
    SSEQLFLNSS NLARSVRWDA RNFGEAINTF AGLRAKHQAN PSRPDMMLGS 150
    DNPNWGARVT GDALSVSGLS VRSNHFGSGS SSLGSLSSVR TNPFSSVSSG 200
    SVGGISLRTV GSRPSIRSVF STTSV 225
    Length:225
    Mass (Da):23,552
    Last modified:October 1, 2002 - v1
    Checksum:iC37A55E7555FEE58
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AY082891 Genomic RNA. Translation: AAL99278.1.
    RefSeqiNP_663316.1. NC_004064.1.

    Genome annotation databases

    GeneIDi951160.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AY082891 Genomic RNA. Translation: AAL99278.1 .
    RefSeqi NP_663316.1. NC_004064.1.

    3D structure databases

    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    GeneIDi 951160.

    Family and domain databases

    ProtoNeti Search...

    Publicationsi

    1. "Characterization of an enteropathogenic bovine calicivirus representing a potentially new calicivirus genus."
      Smiley J.R., Chang K.O., Hayes J., Vinje J., Saif L.J.
      J. Virol. 76:10089-10098(2002) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [GENOMIC RNA].

    Entry informationi

    Entry nameiVP2_BECNB
    AccessioniPrimary (citable) accession number: Q8JN59
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: July 1, 2008
    Last sequence update: October 1, 2002
    Last modified: October 1, 2014
    This is version 27 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programViral Protein Annotation Program

    Miscellaneousi

    Miscellaneous

    Translated by a ribosomal terminaition-reinitiation process from the bicistronic mRNA coding for VP1 and VP2.By similarity

    Keywords - Technical termi

    Complete proteome

    External Data

    Dasty 3