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Protein
Submitted name:

60S ribosomal protein L13a

Gene

RPL13a

Organism
Homo sapiens (Human)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionRibonucleoprotein, Ribosomal proteinUniRule annotationImported

Names & Taxonomyi

Protein namesi
Submitted name:
60S ribosomal protein L13aImported
Submitted name:
Ribosomal protein L13aImported
Submitted name:
Ribosomal protein L13a, isoform CRA_bImported
Gene namesi
Name:RPL13aImported
Synonyms:RPL13AImported
ORF Names:hCG_1998057Imported
OrganismiHomo sapiens (Human)Imported
Taxonomic identifieri9606 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo
Proteomesi
  • UP000005640 Componenti: Chromosome 19

Organism-specific databases

HGNCiHGNC:10304. RPL13A.

Subcellular locationi

GO - Cellular componenti

Pathology & Biotechi

Organism-specific databases

OpenTargetsiENSG00000142541.

Expressioni

Gene expression databases

BgeeiENSG00000142541.

Interactioni

Protein-protein interaction databases

STRINGi9606.ENSP00000375730.

Family & Domainsi

Sequence similaritiesi

Belongs to the universal ribosomal protein uL13 family.UniRule annotation

Phylogenomic databases

eggNOGiKOG3204. Eukaryota.
COG0102. LUCA.
GeneTreeiENSGT00390000010799.
HOVERGENiHBG062176.

Family and domain databases

Gene3Di3.90.1180.10. 2 hits.
InterProiView protein in InterPro
IPR005822. Ribosomal_L13.
IPR023563. Ribosomal_L13_CS.
IPR005755. Ribosomal_L13_euk/arc.
PANTHERiPTHR11545. PTHR11545. 1 hit.
PTHR11545:SF8. PTHR11545:SF8. 1 hit.
PfamiView protein in Pfam
PF00572. Ribosomal_L13. 1 hit.
SUPFAMiSSF52161. SSF52161. 1 hit.
TIGRFAMsiTIGR01077. L13_A_E. 1 hit.
PROSITEiView protein in PROSITE
PS00783. RIBOSOMAL_L13. 1 hit.

Sequencei

Sequence statusi: Complete.

Q8J015-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MNTNPSRGPY HFRAPSRIFW RTVRGMLPHK TKRGQAALDR LKVFDGIPPP
60 70 80 90 100
YDKKKRMVVP AALKVVRLKP TRKFAYLGRL AHEVGWKYQA VTATLEEKRK
110 120 130 140
EKAKIHYRKK KQLMRLRKQA EKNVEKKIDK YTEVLKTHGL LV
Length:142
Mass (Da):16,731
Last modified:March 1, 2003 - v1
Checksum:iF67CCD5F7D3E9396
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC010619 Genomic DNA. No translation available.
AB082924 mRNA. Translation: BAC16800.1.
CH471177 Genomic DNA. Translation: EAW52496.1.
RefSeqiNP_001257420.1. NM_001270491.1.
UniGeneiHs.523185.

Genome annotation databases

EnsembliENST00000621674; ENSP00000477755; ENSG00000142541.
GeneIDi23521.
UCSCiuc031rlt.2. human.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC010619 Genomic DNA. No translation available.
AB082924 mRNA. Translation: BAC16800.1.
CH471177 Genomic DNA. Translation: EAW52496.1.
RefSeqiNP_001257420.1. NM_001270491.1.
UniGeneiHs.523185.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi9606.ENSP00000375730.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENST00000621674; ENSP00000477755; ENSG00000142541.
GeneIDi23521.
UCSCiuc031rlt.2. human.

Organism-specific databases

CTDi23521.
HGNCiHGNC:10304. RPL13A.
OpenTargetsiENSG00000142541.
GenAtlasiSearch...

Phylogenomic databases

eggNOGiKOG3204. Eukaryota.
COG0102. LUCA.
GeneTreeiENSGT00390000010799.
HOVERGENiHBG062176.

Miscellaneous databases

ChiTaRSiRPL13A. human.
GenomeRNAii23521.

Gene expression databases

BgeeiENSG00000142541.

Family and domain databases

Gene3Di3.90.1180.10. 2 hits.
InterProiView protein in InterPro
IPR005822. Ribosomal_L13.
IPR023563. Ribosomal_L13_CS.
IPR005755. Ribosomal_L13_euk/arc.
PANTHERiPTHR11545. PTHR11545. 1 hit.
PTHR11545:SF8. PTHR11545:SF8. 1 hit.
PfamiView protein in Pfam
PF00572. Ribosomal_L13. 1 hit.
SUPFAMiSSF52161. SSF52161. 1 hit.
TIGRFAMsiTIGR01077. L13_A_E. 1 hit.
PROSITEiView protein in PROSITE
PS00783. RIBOSOMAL_L13. 1 hit.
ProtoNetiSearch...

Entry informationi

Entry nameiQ8J015_HUMAN
AccessioniPrimary (citable) accession number: Q8J015
Entry historyiIntegrated into UniProtKB/TrEMBL: March 1, 2003
Last sequence update: March 1, 2003
Last modified: May 10, 2017
This is version 98 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.

Miscellaneousi

Keywords - Technical termi

Complete proteome, Proteomics identificationCombined sources, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.