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Q8IZM0 (CNG1O_HUMAN) Reviewed, UniProtKB/Swiss-Prot

Last modified January 22, 2014. Version 35. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (1) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
Putative CNGA1-overlapping antisense gene protein
Alternative name(s):
Anti-CNG1
OrganismHomo sapiens (Human) [Reference proteome]
Taxonomic identifier9606 [NCBI]
Taxonomic lineageEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo

Protein attributes

Sequence length81 AA.
Sequence statusComplete.
Protein existenceUncertain

General annotation (Comments)

Tissue specificity

Expressed in brain, notably in regions involved in long-term potentiation and long-term depression, such as hippocampal CA1 and CA3, dentate gyrus and cerebellar Purkinje layer. Ref.1

Miscellaneous

Located on the opposite DNA strand of the CNGA1 gene at chromosome 4p13. Its transcription may play a role in CNGA1 transcription regulation.

Caution

Could be the product of a pseudogene. According to Ref.1, it is not clear whether this transcript encodes a protein.

Ontologies

Keywords
   Technical termComplete proteome
Reference proteome
Gene Ontology (GO)
None. [Check GOA]

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 8181Putative CNGA1-overlapping antisense gene protein
PRO_0000337143

Sequences

Sequence LengthMass (Da)Tools
Q8IZM0 [UniParc].

Last modified March 1, 2003. Version 1.
Checksum: 28B2980F9557E140

FASTA819,081
        10         20         30         40         50         60 
MDSYSAKIRA NLVCRRSTDP SIRVTFSSRS LGSLPAFAMF RSSRPSFIKI CFPFSSSIVL 

        70         80 
ASGYSVRASM RSSFERQNRS E 

« Hide

References

[1]"An endogenous RNA transcript antisense to CNG(alpha)1 cation channel mRNA."
Cheng C.-H., Yew D.-T., Kwan H.-Y., Zhou Q., Huang Y., Liu Y., Chan W.-Y., Yao X.
Mol. Biol. Cell 13:3696-3705(2002) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [MRNA], TISSUE SPECIFICITY.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AF547222 mRNA. Translation: AAN65378.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Proteomic databases

PRIDEQ8IZM0.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Organism-specific databases

neXtProtNX_Q8IZM0.

Phylogenomic databases

eggNOGNOG73520.
PhylomeDBQ8IZM0.

Gene expression databases

GenevestigatorQ8IZM0.

Family and domain databases

ProtoNetSearch...

Other

NextBio35541132.

Entry information

Entry nameCNG1O_HUMAN
AccessionPrimary (citable) accession number: Q8IZM0
Entry history
Integrated into UniProtKB/Swiss-Prot: May 20, 2008
Last sequence update: March 1, 2003
Last modified: January 22, 2014
This is version 35 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.

Relevant documents

Human chromosome 4

Human chromosome 4: entries, gene names and cross-references to MIM