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Q8IZ96

- CKLF1_HUMAN

UniProt

Q8IZ96 - CKLF1_HUMAN

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Protein

CKLF-like MARVEL transmembrane domain-containing protein 1

Gene

CMTM1

Organism
Homo sapiens (Human)
Status
Reviewed - Annotation score: 5 out of 5- Experimental evidence at transcript leveli

Functioni

GO - Biological processi

  1. chemotaxis Source: UniProtKB-KW
Complete GO annotation...

Keywords - Molecular functioni

Cytokine

Keywords - Biological processi

Chemotaxis

Names & Taxonomyi

Protein namesi
Recommended name:
CKLF-like MARVEL transmembrane domain-containing protein 1
Alternative name(s):
Chemokine-like factor superfamily member 1
Gene namesi
Name:CMTM1
Synonyms:CKLFSF1
OrganismiHomo sapiens (Human)
Taxonomic identifieri9606 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo
ProteomesiUP000005640: Chromosome 16

Organism-specific databases

HGNCiHGNC:19172. CMTM1.

Subcellular locationi

GO - Cellular componenti

  1. extracellular space Source: UniProtKB-KW
  2. integral component of membrane Source: UniProtKB-KW
Complete GO annotation...

Keywords - Cellular componenti

Membrane

Pathology & Biotechi

Organism-specific databases

PharmGKBiPA38811.

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 169169CKLF-like MARVEL transmembrane domain-containing protein 1PRO_0000186097Add
BLAST

Proteomic databases

MaxQBiQ8IZ96.
PaxDbiQ8IZ96.
PRIDEiQ8IZ96.

PTM databases

PhosphoSiteiQ8IZ96.

Expressioni

Tissue specificityi

Highly expressed in testis.2 Publications

Gene expression databases

BgeeiQ8IZ96.
ExpressionAtlasiQ8IZ96. baseline.
GenevestigatoriQ8IZ96.

Organism-specific databases

HPAiHPA013801.
HPA017136.

Interactioni

Protein-protein interaction databases

BioGridi125251. 1 interaction.

Structurei

3D structure databases

ProteinModelPortaliQ8IZ96.
ModBaseiSearch...
MobiDBiSearch...

Transmembrane

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Transmembranei22 – 4221HelicalSequence AnalysisAdd
BLAST
Transmembranei46 – 6621HelicalSequence AnalysisAdd
BLAST
Transmembranei79 – 9921HelicalSequence AnalysisAdd
BLAST
Transmembranei110 – 13021HelicalSequence AnalysisAdd
BLAST

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini17 – 135119MARVELPROSITE-ProRule annotationAdd
BLAST

Sequence similaritiesi

Belongs to the chemokine-like factor family.Curated
Contains 1 MARVEL domain.PROSITE-ProRule annotation

Keywords - Domaini

Transmembrane, Transmembrane helix

Phylogenomic databases

eggNOGiNOG290806.
GeneTreeiENSGT00520000055675.
HOGENOMiHOG000143431.
HOVERGENiHBG050979.
InParanoidiQ8IZ96.
OMAiYHIEEAD.
OrthoDBiEOG7JMGF9.
PhylomeDBiQ8IZ96.
TreeFamiTF338711.

Family and domain databases

InterProiIPR008253. Marvel.
[Graphical view]
PROSITEiPS51225. MARVEL. 1 hit.
[Graphical view]

Sequences (17)i

Sequence statusi: Complete.

This entry describes 17 isoformsi produced by alternative splicing. Align

Isoform 1 (identifier: Q8IZ96-1) [UniParc]FASTAAdd to Basket

This isoform has been chosen as the 'canonical' sequence. All positional information in this entry refers to it. This is also the sequence that appears in the downloadable versions of the entry.

« Hide

        10         20         30         40         50
MDPEHAKPES SEAPSGNLKQ PETAAALSLI LGALACFIIT QANESFITIT
60 70 80 90 100
SLEICIVVFF ILIYVLTLHH LLTYLHWPLL DLTNSIITAV FLSVVAILAM
110 120 130 140 150
QEKKRRHLLY VGGSLCLTAV IVCCIDAFVV TTKMRTNLKR FLGVEVERKL
160
SPAKDAYPET GPDAPQRPA
Length:169
Mass (Da):18,576
Last modified:March 1, 2003 - v1
Checksum:i72F3C2E26D738E76
GO
Isoform 1a (identifier: Q8IZ96-2) [UniParc]FASTAAdd to Basket

Also known as: 17

The sequence of this isoform differs from the canonical sequence as follows:
     1-26: MDPEHAKPESSEAPSGNLKQPETAAA → MLKILR

Show »
Length:149
Mass (Da):16,656
Checksum:i49B9A541A50808A4
GO
Isoform 1b (identifier: Q8IZ96-3) [UniParc]FASTAAdd to Basket

The sequence of this isoform differs from the canonical sequence as follows:
     1-26: MDPEHAKPESSEAPSGNLKQPETAAA → MLKILR
     115-169: Missing.

Show »
Length:94
Mass (Da):10,640
Checksum:i191F4C3E3CAC7D90
GO
Isoform 2 (identifier: Q8IZ96-4) [UniParc]FASTAAdd to Basket

The sequence of this isoform differs from the canonical sequence as follows:
     114-114: S → R
     115-169: Missing.

Show »
Length:114
Mass (Da):12,629
Checksum:iF50DA17544F24B18
GO
Isoform 3 (identifier: Q8IZ96-5) [UniParc]FASTAAdd to Basket

The sequence of this isoform differs from the canonical sequence as follows:
     28-33: SLILGA → ASSGSV
     34-80: Missing.

Show »
Length:122
Mass (Da):13,037
Checksum:i3F2C56CEBC3F3146
GO
Isoform 4 (identifier: Q8IZ96-6) [UniParc]FASTAAdd to Basket

The sequence of this isoform differs from the canonical sequence as follows:
     28-80: Missing.

Show »
Length:116
Mass (Da):12,549
Checksum:iF641CD1FB1E06E98
GO
Isoform 5 (identifier: Q8IZ96-7) [UniParc]FASTAAdd to Basket

The sequence of this isoform differs from the canonical sequence as follows:
     28-80: Missing.
     114-114: S → R
     115-169: Missing.

Show »
Length:61
Mass (Da):6,602
Checksum:iFD45F64EAC5105D7
GO
Isoform 6 (identifier: Q8IZ96-8) [UniParc]FASTAAdd to Basket

Also known as: 7

The sequence of this isoform differs from the canonical sequence as follows:
     28-92: SLILGALACF...TNSIITAVFL → ASSGSVVSSV...TVSLQLCSFQ
     93-169: Missing.

Show »
Length:92
Mass (Da):9,389
Checksum:i73AF83CE10165410
GO
Isoform 8 (identifier: Q8IZ96-9) [UniParc]FASTAAdd to Basket

Also known as: 9

The sequence of this isoform differs from the canonical sequence as follows:
     81-91: DLTNSIITAVF → NAEYRKQTKQI
     92-169: Missing.

Show »
Length:91
Mass (Da):10,194
Checksum:i7124F06BA1F1E5A1
GO
Isoform 10 (identifier: Q8IZ96-10) [UniParc]FASTAAdd to Basket

The sequence of this isoform differs from the canonical sequence as follows:
     28-65: SLILGALACF...IVVFFILIYV → ASSGSVVSSV...TGPDAPQRPA
     66-169: Missing.

Show »
Length:65
Mass (Da):6,669
Checksum:iFEC634E7970EA7DB
GO
Isoform 11 (identifier: Q8IZ96-11) [UniParc]FASTAAdd to Basket

The sequence of this isoform differs from the canonical sequence as follows:
     28-33: SLILGA → EAYNSK
     34-169: Missing.

Show »
Length:33
Mass (Da):3,499
Checksum:i0AA27266266CA05B
GO
Isoform 12 (identifier: Q8IZ96-12) [UniParc]FASTAAdd to Basket

The sequence of this isoform differs from the canonical sequence as follows:
     8-65: Missing.
     77-77: W → R
     81-103: DLTNSIITAVFLSVVAILAMQEK → AAELSLSHRMPSTGSRQSKYEQL
     104-169: Missing.

Show »
Length:45
Mass (Da):5,208
Checksum:iC680DB671BC002BB
GO
Isoform 13 (identifier: Q8IZ96-13) [UniParc]FASTAAdd to Basket

The sequence of this isoform differs from the canonical sequence as follows:
     28-38: SLILGALACFI → EADKANMSNFN
     39-169: Missing.

Show »
Length:38
Mass (Da):4,028
Checksum:i60F335FBCEADCA15
GO
Isoform 14 (identifier: Q8IZ96-14) [UniParc]FASTAAdd to Basket

Also known as: 15

The sequence of this isoform differs from the canonical sequence as follows:
     28-32: SLILG → LCSFQ
     33-169: Missing.

Show »
Length:32
Mass (Da):3,385
Checksum:i511FE8C500905B46
GO
Isoform 16 (identifier: Q8IZ96-15) [UniParc]FASTAAdd to Basket

The sequence of this isoform differs from the canonical sequence as follows:
     28-28: S → R
     29-169: Missing.

Show »
Length:28
Mass (Da):2,962
Checksum:i43B05B463D202C28
GO
Isoform 19 (identifier: Q8IZ96-16) [UniParc]FASTAAdd to Basket

Also known as: 20,21,22,23

The sequence of this isoform differs from the canonical sequence as follows:
     1-26: MDPEHAKPESSEAPSGNLKQPETAAA → MLKILR
     81-91: DLTNSIITAVF → NAEYRKQTKQI
     92-169: Missing.

Show »
Length:71
Mass (Da):8,274
Checksum:i8F60080E17B7AC10
GO
Isoform 24 (identifier: Q8IZ96-17) [UniParc]FASTAAdd to Basket

The sequence of this isoform differs from the canonical sequence as follows:
     26-26: A → ALASSGSVVS...SPTGMLKILR

Note: No experimental confirmation available.

Show »
Length:286
Mass (Da):31,068
Checksum:i72C6D584CB10DEEC
GO

Natural variant

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Natural varianti10 – 101S → T.
Corresponds to variant rs16956746 [ dbSNP | Ensembl ].
VAR_053039

Alternative sequence

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Alternative sequencei1 – 2626MDPEH…ETAAA → MLKILR in isoform 1a, isoform 1b and isoform 19. 2 PublicationsVSP_008229Add
BLAST
Alternative sequencei8 – 6558Missing in isoform 12. 1 PublicationVSP_008230Add
BLAST
Alternative sequencei26 – 261A → ALASSGSVVSSVPKAQRNIS AKTAPRKHPAVSIRSAQSAA AARPQGSEGTAPSRKATTRP PPKPTLPPPTPSAHTESKLL NEMAIKERVEGRAKVPYKFR DSLKRFSFSPTGMLKILR in isoform 24. 1 PublicationVSP_043579
Alternative sequencei28 – 9265SLILG…TAVFL → ASSGSVVSSVPKAQRNISAK TAPRKHPAVSIRSAQSAAAA RPQGSEGTAPSRILPTVSLQ LCSFQ in isoform 6. 1 PublicationVSP_008238Add
BLAST
Alternative sequencei28 – 8053Missing in isoform 4 and isoform 5. 1 PublicationVSP_008237Add
BLAST
Alternative sequencei28 – 6538SLILG…ILIYV → ASSGSVVSSVPKAQRNISAK TAPRKHPETGPDAPQRPA in isoform 10. 1 PublicationVSP_008236Add
BLAST
Alternative sequencei28 – 3811SLILGALACFI → EADKANMSNFN in isoform 13. 1 PublicationVSP_008235Add
BLAST
Alternative sequencei28 – 336SLILGA → EAYNSK in isoform 11. 1 PublicationVSP_008233
Alternative sequencei28 – 336SLILGA → ASSGSV in isoform 3. 1 PublicationVSP_008234
Alternative sequencei28 – 325SLILG → LCSFQ in isoform 14. 1 PublicationVSP_008232
Alternative sequencei28 – 281S → R in isoform 16. 1 PublicationVSP_008231
Alternative sequencei29 – 169141Missing in isoform 16. 1 PublicationVSP_008239Add
BLAST
Alternative sequencei33 – 169137Missing in isoform 14. 1 PublicationVSP_008240Add
BLAST
Alternative sequencei34 – 169136Missing in isoform 11. 1 PublicationVSP_008241Add
BLAST
Alternative sequencei34 – 8047Missing in isoform 3. 1 PublicationVSP_008242Add
BLAST
Alternative sequencei39 – 169131Missing in isoform 13. 1 PublicationVSP_008243Add
BLAST
Alternative sequencei66 – 169104Missing in isoform 10. 1 PublicationVSP_008244Add
BLAST
Alternative sequencei77 – 771W → R in isoform 12. 1 PublicationVSP_008245
Alternative sequencei81 – 10323DLTNS…AMQEK → AAELSLSHRMPSTGSRQSKY EQL in isoform 12. 1 PublicationVSP_008246Add
BLAST
Alternative sequencei81 – 9111DLTNSIITAVF → NAEYRKQTKQI in isoform 8 and isoform 19. 2 PublicationsVSP_008247Add
BLAST
Alternative sequencei92 – 16978Missing in isoform 8 and isoform 19. 2 PublicationsVSP_008248Add
BLAST
Alternative sequencei93 – 16977Missing in isoform 6. 1 PublicationVSP_008249Add
BLAST
Alternative sequencei104 – 16966Missing in isoform 12. 1 PublicationVSP_008250Add
BLAST
Alternative sequencei114 – 1141S → R in isoform 2 and isoform 5. 1 PublicationVSP_008251
Alternative sequencei115 – 16955Missing in isoform 1b, isoform 2 and isoform 5. 1 PublicationVSP_008252Add
BLAST

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AF278576 mRNA. Translation: AAK73015.1.
AF278577 mRNA. Translation: AAK73016.1.
AY174118 mRNA. Translation: AAN73227.1.
AY174119 mRNA. Translation: AAN73228.1.
AY174120 mRNA. Translation: AAN73229.1.
AY174121 mRNA. Translation: AAN73230.1.
AY174122 mRNA. Translation: AAN73231.1.
AY174123 mRNA. Translation: AAN73232.1.
AY174124 mRNA. Translation: AAN73233.1.
AY174125 mRNA. Translation: AAN73234.1.
AY174126 mRNA. Translation: AAN73235.1.
AY174127 mRNA. Translation: AAN73236.1.
AY174128 mRNA. Translation: AAN73237.1.
AY174129 mRNA. Translation: AAN73238.1.
AY174130 mRNA. Translation: AAN73239.1.
AY174131 mRNA. Translation: AAN73240.1.
AY174132 mRNA. Translation: AAN73241.1.
AY174133 mRNA. Translation: AAN73242.1.
AY174134 mRNA. Translation: AAN73243.1.
AY174135 mRNA. Translation: AAN73244.1.
AY174136 mRNA. Translation: AAN73245.1.
AY174137 mRNA. Translation: AAN73246.1.
AY174138 mRNA. Translation: AAN73247.1.
DQ309766 mRNA. Translation: ABC33727.2.
AC010542 Genomic DNA. No translation available.
CH471092 Genomic DNA. Translation: EAW83023.1.
BC057852 mRNA. Translation: AAH57852.2.
CCDSiCCDS10810.1. [Q8IZ96-5]
CCDS10811.1. [Q8IZ96-6]
CCDS10812.2. [Q8IZ96-17]
CCDS45503.1. [Q8IZ96-1]
CCDS54019.1. [Q8IZ96-4]
CCDS54020.1. [Q8IZ96-7]
CCDS54021.1. [Q8IZ96-15]
RefSeqiNP_443725.3. NM_052999.3. [Q8IZ96-17]
NP_851785.2. NM_181268.2.
NP_851786.1. NM_181269.2. [Q8IZ96-1]
NP_851787.1. NM_181270.2. [Q8IZ96-4]
NP_851788.1. NM_181271.2. [Q8IZ96-5]
NP_851789.1. NM_181272.2. [Q8IZ96-6]
NP_851800.1. NM_181283.2. [Q8IZ96-7]
NP_851813.1. NM_181296.2. [Q8IZ96-15]
UniGeneiHs.15159.
Hs.698621.
Hs.722591.

Genome annotation databases

EnsembliENST00000332695; ENSP00000331428; ENSG00000089505. [Q8IZ96-5]
ENST00000333001; ENSP00000331494; ENSG00000089505. [Q8IZ96-9]
ENST00000336328; ENSP00000337119; ENSG00000089505. [Q8IZ96-6]
ENST00000379500; ENSP00000368814; ENSG00000089505. [Q8IZ96-17]
ENST00000457188; ENSP00000405729; ENSG00000089505. [Q8IZ96-1]
ENST00000528324; ENSP00000432398; ENSG00000089505. [Q8IZ96-4]
ENST00000528484; ENSP00000437079; ENSG00000089505. [Q8IZ96-13]
ENST00000529386; ENSP00000431303; ENSG00000089505. [Q8IZ96-13]
ENST00000531885; ENSP00000432687; ENSG00000089505. [Q8IZ96-7]
ENST00000533078; ENSP00000432387; ENSG00000089505. [Q8IZ96-14]
ENST00000533666; ENSP00000435020; ENSG00000089505. [Q8IZ96-15]
ENST00000533915; ENSP00000435755; ENSG00000089505. [Q8IZ96-9]
GeneIDi113540.
KEGGihsa:113540.
UCSCiuc002epa.4. human. [Q8IZ96-15]
uc002eph.4. human. [Q8IZ96-4]
uc002epi.4. human. [Q8IZ96-1]
uc002epj.4. human. [Q8IZ96-7]
uc002epk.4. human. [Q8IZ96-6]
uc002epl.4. human. [Q8IZ96-5]
uc002epr.4. human. [Q8IZ96-17]

Polymorphism databases

DMDMi34921810.

Keywords - Coding sequence diversityi

Alternative splicing, Polymorphism

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AF278576 mRNA. Translation: AAK73015.1 .
AF278577 mRNA. Translation: AAK73016.1 .
AY174118 mRNA. Translation: AAN73227.1 .
AY174119 mRNA. Translation: AAN73228.1 .
AY174120 mRNA. Translation: AAN73229.1 .
AY174121 mRNA. Translation: AAN73230.1 .
AY174122 mRNA. Translation: AAN73231.1 .
AY174123 mRNA. Translation: AAN73232.1 .
AY174124 mRNA. Translation: AAN73233.1 .
AY174125 mRNA. Translation: AAN73234.1 .
AY174126 mRNA. Translation: AAN73235.1 .
AY174127 mRNA. Translation: AAN73236.1 .
AY174128 mRNA. Translation: AAN73237.1 .
AY174129 mRNA. Translation: AAN73238.1 .
AY174130 mRNA. Translation: AAN73239.1 .
AY174131 mRNA. Translation: AAN73240.1 .
AY174132 mRNA. Translation: AAN73241.1 .
AY174133 mRNA. Translation: AAN73242.1 .
AY174134 mRNA. Translation: AAN73243.1 .
AY174135 mRNA. Translation: AAN73244.1 .
AY174136 mRNA. Translation: AAN73245.1 .
AY174137 mRNA. Translation: AAN73246.1 .
AY174138 mRNA. Translation: AAN73247.1 .
DQ309766 mRNA. Translation: ABC33727.2 .
AC010542 Genomic DNA. No translation available.
CH471092 Genomic DNA. Translation: EAW83023.1 .
BC057852 mRNA. Translation: AAH57852.2 .
CCDSi CCDS10810.1. [Q8IZ96-5 ]
CCDS10811.1. [Q8IZ96-6 ]
CCDS10812.2. [Q8IZ96-17 ]
CCDS45503.1. [Q8IZ96-1 ]
CCDS54019.1. [Q8IZ96-4 ]
CCDS54020.1. [Q8IZ96-7 ]
CCDS54021.1. [Q8IZ96-15 ]
RefSeqi NP_443725.3. NM_052999.3. [Q8IZ96-17 ]
NP_851785.2. NM_181268.2.
NP_851786.1. NM_181269.2. [Q8IZ96-1 ]
NP_851787.1. NM_181270.2. [Q8IZ96-4 ]
NP_851788.1. NM_181271.2. [Q8IZ96-5 ]
NP_851789.1. NM_181272.2. [Q8IZ96-6 ]
NP_851800.1. NM_181283.2. [Q8IZ96-7 ]
NP_851813.1. NM_181296.2. [Q8IZ96-15 ]
UniGenei Hs.15159.
Hs.698621.
Hs.722591.

3D structure databases

ProteinModelPortali Q8IZ96.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

BioGridi 125251. 1 interaction.

PTM databases

PhosphoSitei Q8IZ96.

Polymorphism databases

DMDMi 34921810.

Proteomic databases

MaxQBi Q8IZ96.
PaxDbi Q8IZ96.
PRIDEi Q8IZ96.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

Ensembli ENST00000332695 ; ENSP00000331428 ; ENSG00000089505 . [Q8IZ96-5 ]
ENST00000333001 ; ENSP00000331494 ; ENSG00000089505 . [Q8IZ96-9 ]
ENST00000336328 ; ENSP00000337119 ; ENSG00000089505 . [Q8IZ96-6 ]
ENST00000379500 ; ENSP00000368814 ; ENSG00000089505 . [Q8IZ96-17 ]
ENST00000457188 ; ENSP00000405729 ; ENSG00000089505 . [Q8IZ96-1 ]
ENST00000528324 ; ENSP00000432398 ; ENSG00000089505 . [Q8IZ96-4 ]
ENST00000528484 ; ENSP00000437079 ; ENSG00000089505 . [Q8IZ96-13 ]
ENST00000529386 ; ENSP00000431303 ; ENSG00000089505 . [Q8IZ96-13 ]
ENST00000531885 ; ENSP00000432687 ; ENSG00000089505 . [Q8IZ96-7 ]
ENST00000533078 ; ENSP00000432387 ; ENSG00000089505 . [Q8IZ96-14 ]
ENST00000533666 ; ENSP00000435020 ; ENSG00000089505 . [Q8IZ96-15 ]
ENST00000533915 ; ENSP00000435755 ; ENSG00000089505 . [Q8IZ96-9 ]
GeneIDi 113540.
KEGGi hsa:113540.
UCSCi uc002epa.4. human. [Q8IZ96-15 ]
uc002eph.4. human. [Q8IZ96-4 ]
uc002epi.4. human. [Q8IZ96-1 ]
uc002epj.4. human. [Q8IZ96-7 ]
uc002epk.4. human. [Q8IZ96-6 ]
uc002epl.4. human. [Q8IZ96-5 ]
uc002epr.4. human. [Q8IZ96-17 ]

Organism-specific databases

CTDi 113540.
GeneCardsi GC16P066600.
HGNCi HGNC:19172. CMTM1.
HPAi HPA013801.
HPA017136.
MIMi 607884. gene.
neXtProti NX_Q8IZ96.
PharmGKBi PA38811.
GenAtlasi Search...

Phylogenomic databases

eggNOGi NOG290806.
GeneTreei ENSGT00520000055675.
HOGENOMi HOG000143431.
HOVERGENi HBG050979.
InParanoidi Q8IZ96.
OMAi YHIEEAD.
OrthoDBi EOG7JMGF9.
PhylomeDBi Q8IZ96.
TreeFami TF338711.

Miscellaneous databases

GenomeRNAii 113540.
NextBioi 78856.
PROi Q8IZ96.
SOURCEi Search...

Gene expression databases

Bgeei Q8IZ96.
ExpressionAtlasi Q8IZ96. baseline.
Genevestigatori Q8IZ96.

Family and domain databases

InterProi IPR008253. Marvel.
[Graphical view ]
PROSITEi PS51225. MARVEL. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

« Hide 'large scale' publications
  1. "Identification of eight genes encoding chemokine-like factor superfamily members 1-8 (CKLFSF1-8) by in silico cloning and experimental validation."
    Han W., Ding P., Xu M., Wang L., Rui M., Shi S., Liu Y., Zheng Y., Chen Y., Yang T., Ma D.
    Genomics 81:609-617(2003) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [MRNA] (ISOFORM 1), TISSUE SPECIFICITY.
    Tissue: Testis.
  2. "Molecular cloning and characterization of chemokine-like factor super family member 1 (CKLFSF1), a novel human gene with at least 23 alternative splicing isoforms in testis tissue."
    Wang L., Wu C., Zheng Y., Qiu X., Wang L., Fan H., Han W., Lv B., Wang Y., Zhu X., Xu M., Ding P., Cheng S., Zhang Y., Song Q., Ma D.
    Int. J. Biochem. Cell Biol. 36:1492-1501(2004) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [MRNA] (ISOFORMS 1A; 1B; 2; 3; 4; 5; 6; 8; 10; 11; 12; 13; 14; 16 AND 19), TISSUE SPECIFICITY.
    Tissue: Testis.
  3. "Homo sapiens chemokine-like factor superfamily 1 (CKLFSF1), transcript variant 24."
    Wang J., Wang L.
    Submitted (NOV-2005) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [MRNA] (ISOFORM 19).
  4. "The sequence and analysis of duplication-rich human chromosome 16."
    Martin J., Han C., Gordon L.A., Terry A., Prabhakar S., She X., Xie G., Hellsten U., Chan Y.M., Altherr M., Couronne O., Aerts A., Bajorek E., Black S., Blumer H., Branscomb E., Brown N.C., Bruno W.J.
    , Buckingham J.M., Callen D.F., Campbell C.S., Campbell M.L., Campbell E.W., Caoile C., Challacombe J.F., Chasteen L.A., Chertkov O., Chi H.C., Christensen M., Clark L.M., Cohn J.D., Denys M., Detter J.C., Dickson M., Dimitrijevic-Bussod M., Escobar J., Fawcett J.J., Flowers D., Fotopulos D., Glavina T., Gomez M., Gonzales E., Goodstein D., Goodwin L.A., Grady D.L., Grigoriev I., Groza M., Hammon N., Hawkins T., Haydu L., Hildebrand C.E., Huang W., Israni S., Jett J., Jewett P.B., Kadner K., Kimball H., Kobayashi A., Krawczyk M.-C., Leyba T., Longmire J.L., Lopez F., Lou Y., Lowry S., Ludeman T., Manohar C.F., Mark G.A., McMurray K.L., Meincke L.J., Morgan J., Moyzis R.K., Mundt M.O., Munk A.C., Nandkeshwar R.D., Pitluck S., Pollard M., Predki P., Parson-Quintana B., Ramirez L., Rash S., Retterer J., Ricke D.O., Robinson D.L., Rodriguez A., Salamov A., Saunders E.H., Scott D., Shough T., Stallings R.L., Stalvey M., Sutherland R.D., Tapia R., Tesmer J.G., Thayer N., Thompson L.S., Tice H., Torney D.C., Tran-Gyamfi M., Tsai M., Ulanovsky L.E., Ustaszewska A., Vo N., White P.S., Williams A.L., Wills P.L., Wu J.-R., Wu K., Yang J., DeJong P., Bruce D., Doggett N.A., Deaven L., Schmutz J., Grimwood J., Richardson P., Rokhsar D.S., Eichler E.E., Gilna P., Lucas S.M., Myers R.M., Rubin E.M., Pennacchio L.A.
    Nature 432:988-994(2004) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
  5. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
  6. "The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)."
    The MGC Project Team
    Genome Res. 14:2121-2127(2004) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] (ISOFORM 24).
    Tissue: Testis.

Entry informationi

Entry nameiCKLF1_HUMAN
AccessioniPrimary (citable) accession number: Q8IZ96
Secondary accession number(s): Q2PPY5
, Q6PEV5, Q8IU76, Q8IU83, Q8IU86, Q8IU93, Q8IZ87, Q8IZ88, Q8IZ89, Q8IZ90, Q8IZ91, Q8IZ92, Q8IZ93, Q8IZ94, Q8IZ95, Q96JC2, Q96JC3
Entry historyi
Integrated into UniProtKB/Swiss-Prot: September 19, 2003
Last sequence update: March 1, 2003
Last modified: October 29, 2014
This is version 92 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Human chromosome 16
    Human chromosome 16: entries, gene names and cross-references to MIM
  2. Human entries with polymorphisms or disease mutations
    List of human entries with polymorphisms or disease mutations
  3. Human polymorphisms and disease mutations
    Index of human polymorphisms and disease mutations
  4. MIM cross-references
    Online Mendelian Inheritance in Man (MIM) cross-references in UniProtKB/Swiss-Prot
  5. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3