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Q8IYS8 (BD1L2_HUMAN) Reviewed, UniProtKB/Swiss-Prot

Last modified July 9, 2014. Version 63. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (2) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
Putative biorientation of chromosomes in cell division protein 1-like 2
Alternative name(s):
Putative biorientation of chromosomes in cell division protein 1 pseudogene
Putative protein FAM44C
Gene names
Name:BOD1L2
Synonyms:BOD1P, FAM44C
OrganismHomo sapiens (Human) [Reference proteome]
Taxonomic identifier9606 [NCBI]
Taxonomic lineageEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo

Protein attributes

Sequence length172 AA.
Sequence statusComplete.
Protein existenceUncertain

General annotation (Comments)

Sequence similarities

Belongs to the BOD1 family.

Caution

Could be the product of a pseudogene.

Ontologies

Keywords
   Technical termComplete proteome
Reference proteome
Gene Ontology (GO)
None. [Check GOA]

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 172172Putative biorientation of chromosomes in cell division protein 1-like 2
PRO_0000187033

Regions

Compositional bias4 – 1310Poly-Gly
Compositional bias21 – 244Poly-Gly

Experimental info

Sequence conflict461L → P in BAG54606. Ref.1

Sequences

Sequence LengthMass (Da)Tools
Q8IYS8 [UniParc].

Last modified February 6, 2007. Version 2.
Checksum: 6590AAD1F999A6E5

FASTA17218,075
        10         20         30         40         50         60 
MADGGGGGSG GAGPASTRAS GGGGPINPAS LPPGDPQLIA IIVGQLKSRG LFDSFRRDCK 

        70         80         90        100        110        120 
ADVDTKPAYQ NLSQKADNFV STHLDKQEWN PPANDNQLHD GLRQSVVQSG RSEAGVDRIS 

       130        140        150        160        170 
SQVVDPKLNH IFRPQIEQII HEFLVAQKEA AVPALPPEPE GQDPPAPSQD TS 

« Hide

References

[1]"Complete sequencing and characterization of 21,243 full-length human cDNAs."
Ota T., Suzuki Y., Nishikawa T., Otsuki T., Sugiyama T., Irie R., Wakamatsu A., Hayashi K., Sato H., Nagai K., Kimura K., Makita H., Sekine M., Obayashi M., Nishi T., Shibahara T., Tanaka T., Ishii S. expand/collapse author list , Yamamoto J., Saito K., Kawai Y., Isono Y., Nakamura Y., Nagahari K., Murakami K., Yasuda T., Iwayanagi T., Wagatsuma M., Shiratori A., Sudo H., Hosoiri T., Kaku Y., Kodaira H., Kondo H., Sugawara M., Takahashi M., Kanda K., Yokoi T., Furuya T., Kikkawa E., Omura Y., Abe K., Kamihara K., Katsuta N., Sato K., Tanikawa M., Yamazaki M., Ninomiya K., Ishibashi T., Yamashita H., Murakawa K., Fujimori K., Tanai H., Kimata M., Watanabe M., Hiraoka S., Chiba Y., Ishida S., Ono Y., Takiguchi S., Watanabe S., Yosida M., Hotuta T., Kusano J., Kanehori K., Takahashi-Fujii A., Hara H., Tanase T.-O., Nomura Y., Togiya S., Komai F., Hara R., Takeuchi K., Arita M., Imose N., Musashino K., Yuuki H., Oshima A., Sasaki N., Aotsuka S., Yoshikawa Y., Matsunawa H., Ichihara T., Shiohata N., Sano S., Moriya S., Momiyama H., Satoh N., Takami S., Terashima Y., Suzuki O., Nakagawa S., Senoh A., Mizoguchi H., Goto Y., Shimizu F., Wakebe H., Hishigaki H., Watanabe T., Sugiyama A., Takemoto M., Kawakami B., Yamazaki M., Watanabe K., Kumagai A., Itakura S., Fukuzumi Y., Fujimori Y., Komiyama M., Tashiro H., Tanigami A., Fujiwara T., Ono T., Yamada K., Fujii Y., Ozaki K., Hirao M., Ohmori Y., Kawabata A., Hikiji T., Kobatake N., Inagaki H., Ikema Y., Okamoto S., Okitani R., Kawakami T., Noguchi S., Itoh T., Shigeta K., Senba T., Matsumura K., Nakajima Y., Mizuno T., Morinaga M., Sasaki M., Togashi T., Oyama M., Hata H., Watanabe M., Komatsu T., Mizushima-Sugano J., Satoh T., Shirai Y., Takahashi Y., Nakagawa K., Okumura K., Nagase T., Nomura N., Kikuchi H., Masuho Y., Yamashita R., Nakai K., Yada T., Nakamura Y., Ohara O., Isogai T., Sugano S.
Nat. Genet. 36:40-45(2004) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
Tissue: Testis.
[2]"DNA sequence and analysis of human chromosome 18."
Nusbaum C., Zody M.C., Borowsky M.L., Kamal M., Kodira C.D., Taylor T.D., Whittaker C.A., Chang J.L., Cuomo C.A., Dewar K., FitzGerald M.G., Yang X., Abouelleil A., Allen N.R., Anderson S., Bloom T., Bugalter B., Butler J. expand/collapse author list , Cook A., DeCaprio D., Engels R., Garber M., Gnirke A., Hafez N., Hall J.L., Norman C.H., Itoh T., Jaffe D.B., Kuroki Y., Lehoczky J., Lui A., Macdonald P., Mauceli E., Mikkelsen T.S., Naylor J.W., Nicol R., Nguyen C., Noguchi H., O'Leary S.B., Piqani B., Smith C.L., Talamas J.A., Topham K., Totoki Y., Toyoda A., Wain H.M., Young S.K., Zeng Q., Zimmer A.R., Fujiyama A., Hattori M., Birren B.W., Sakaki Y., Lander E.S.
Nature 437:551-555(2005) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
[3]"The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)."
The MGC Project Team
Genome Res. 14:2121-2127(2004) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
Tissue: Testis.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AK127964 mRNA. Translation: BAG54606.1.
AC100775 mRNA. No translation available.
BC021740 mRNA. No translation available.
CCDSCCDS59322.1.
RefSeqNP_001244893.1. NM_001257964.1.
UniGeneHs.127882.

3D structure databases

ProteinModelPortalQ8IYS8.
ModBaseSearch...
MobiDBSearch...

PTM databases

PhosphoSiteQ8IYS8.

Polymorphism databases

DMDM125987827.

Proteomic databases

PRIDEQ8IYS8.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblENST00000585477; ENSP00000467843; ENSG00000228075.
GeneID284257.
KEGGhsa:284257.
UCSCuc002lgm.3. human.

Organism-specific databases

CTD284257.
GeneCardsGC18P054835.
HGNCHGNC:28505. BOD1L2.
neXtProtNX_Q8IYS8.
PharmGKBPA134949651.
GenAtlasSearch...

Phylogenomic databases

OMARRDCKAD.
OrthoDBEOG7X3QQD.
PhylomeDBQ8IYS8.

Gene expression databases

BgeeQ8IYS8.
CleanExHS_FAM44C.
GenevestigatorQ8IYS8.

Family and domain databases

InterProIPR026955. Bod1_like.
[Graphical view]
PANTHERPTHR31532. PTHR31532. 1 hit.
ProtoNetSearch...

Other

GenomeRNAi284257.
NextBio94665.

Entry information

Entry nameBD1L2_HUMAN
AccessionPrimary (citable) accession number: Q8IYS8
Secondary accession number(s): B3KXU4, Q8WW13
Entry history
Integrated into UniProtKB/Swiss-Prot: November 22, 2005
Last sequence update: February 6, 2007
Last modified: July 9, 2014
This is version 63 of the entry and version 2 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.

Relevant documents

SIMILARITY comments

Index of protein domains and families

Human chromosome 18

Human chromosome 18: entries, gene names and cross-references to MIM