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Q8IYS8

- BD1L2_HUMAN

UniProt

Q8IYS8 - BD1L2_HUMAN

Protein

Putative biorientation of chromosomes in cell division protein 1-like 2

Gene

BOD1L2

Organism
Homo sapiens (Human)
Status
Reviewed - Annotation score: 2 out of 5- Protein uncertaini
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    • History
      Entry version 64 (01 Oct 2014)
      Sequence version 2 (06 Feb 2007)
      Previous versions | rss
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    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Putative biorientation of chromosomes in cell division protein 1-like 2
    Alternative name(s):
    Putative biorientation of chromosomes in cell division protein 1 pseudogene
    Putative protein FAM44C
    Gene namesi
    Name:BOD1L2
    Synonyms:BOD1P, FAM44C
    OrganismiHomo sapiens (Human)
    Taxonomic identifieri9606 [NCBI]
    Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo
    ProteomesiUP000005640: Chromosome 18

    Organism-specific databases

    HGNCiHGNC:28505. BOD1L2.

    Pathology & Biotechi

    Organism-specific databases

    PharmGKBiPA134949651.

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Chaini1 – 172172Putative biorientation of chromosomes in cell division protein 1-like 2PRO_0000187033Add
    BLAST

    Proteomic databases

    PRIDEiQ8IYS8.

    PTM databases

    PhosphoSiteiQ8IYS8.

    Expressioni

    Gene expression databases

    BgeeiQ8IYS8.
    CleanExiHS_FAM44C.
    GenevestigatoriQ8IYS8.

    Structurei

    3D structure databases

    ProteinModelPortaliQ8IYS8.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Compositional bias

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Compositional biasi4 – 1310Poly-Gly
    Compositional biasi21 – 244Poly-Gly

    Sequence similaritiesi

    Belongs to the BOD1 family.Curated

    Phylogenomic databases

    OMAiRRDCKAD.
    OrthoDBiEOG7X3QQD.
    PhylomeDBiQ8IYS8.

    Family and domain databases

    InterProiIPR026955. Bod1_like.
    [Graphical view]
    PANTHERiPTHR31532. PTHR31532. 1 hit.

    Sequencei

    Sequence statusi: Complete.

    Q8IYS8-1 [UniParc]FASTAAdd to Basket

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    MADGGGGGSG GAGPASTRAS GGGGPINPAS LPPGDPQLIA IIVGQLKSRG    50
    LFDSFRRDCK ADVDTKPAYQ NLSQKADNFV STHLDKQEWN PPANDNQLHD 100
    GLRQSVVQSG RSEAGVDRIS SQVVDPKLNH IFRPQIEQII HEFLVAQKEA 150
    AVPALPPEPE GQDPPAPSQD TS 172
    Length:172
    Mass (Da):18,075
    Last modified:February 6, 2007 - v2
    Checksum:i6590AAD1F999A6E5
    GO

    Experimental Info

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Sequence conflicti46 – 461L → P in BAG54606. (PubMed:14702039)Curated

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AK127964 mRNA. Translation: BAG54606.1.
    AC100775 mRNA. No translation available.
    BC021740 mRNA. No translation available.
    CCDSiCCDS59322.1.
    RefSeqiNP_001244893.1. NM_001257964.1.
    UniGeneiHs.127882.

    Genome annotation databases

    EnsembliENST00000585477; ENSP00000467843; ENSG00000228075.
    GeneIDi284257.
    KEGGihsa:284257.
    UCSCiuc002lgm.3. human.

    Polymorphism databases

    DMDMi125987827.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AK127964 mRNA. Translation: BAG54606.1 .
    AC100775 mRNA. No translation available.
    BC021740 mRNA. No translation available.
    CCDSi CCDS59322.1.
    RefSeqi NP_001244893.1. NM_001257964.1.
    UniGenei Hs.127882.

    3D structure databases

    ProteinModelPortali Q8IYS8.
    ModBasei Search...
    MobiDBi Search...

    PTM databases

    PhosphoSitei Q8IYS8.

    Polymorphism databases

    DMDMi 125987827.

    Proteomic databases

    PRIDEi Q8IYS8.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    Ensembli ENST00000585477 ; ENSP00000467843 ; ENSG00000228075 .
    GeneIDi 284257.
    KEGGi hsa:284257.
    UCSCi uc002lgm.3. human.

    Organism-specific databases

    CTDi 284257.
    GeneCardsi GC18P054835.
    HGNCi HGNC:28505. BOD1L2.
    neXtProti NX_Q8IYS8.
    PharmGKBi PA134949651.
    GenAtlasi Search...

    Phylogenomic databases

    OMAi RRDCKAD.
    OrthoDBi EOG7X3QQD.
    PhylomeDBi Q8IYS8.

    Miscellaneous databases

    GenomeRNAii 284257.
    NextBioi 94665.

    Gene expression databases

    Bgeei Q8IYS8.
    CleanExi HS_FAM44C.
    Genevestigatori Q8IYS8.

    Family and domain databases

    InterProi IPR026955. Bod1_like.
    [Graphical view ]
    PANTHERi PTHR31532. PTHR31532. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. "Complete sequencing and characterization of 21,243 full-length human cDNAs."
      Ota T., Suzuki Y., Nishikawa T., Otsuki T., Sugiyama T., Irie R., Wakamatsu A., Hayashi K., Sato H., Nagai K., Kimura K., Makita H., Sekine M., Obayashi M., Nishi T., Shibahara T., Tanaka T., Ishii S.
      , Yamamoto J., Saito K., Kawai Y., Isono Y., Nakamura Y., Nagahari K., Murakami K., Yasuda T., Iwayanagi T., Wagatsuma M., Shiratori A., Sudo H., Hosoiri T., Kaku Y., Kodaira H., Kondo H., Sugawara M., Takahashi M., Kanda K., Yokoi T., Furuya T., Kikkawa E., Omura Y., Abe K., Kamihara K., Katsuta N., Sato K., Tanikawa M., Yamazaki M., Ninomiya K., Ishibashi T., Yamashita H., Murakawa K., Fujimori K., Tanai H., Kimata M., Watanabe M., Hiraoka S., Chiba Y., Ishida S., Ono Y., Takiguchi S., Watanabe S., Yosida M., Hotuta T., Kusano J., Kanehori K., Takahashi-Fujii A., Hara H., Tanase T.-O., Nomura Y., Togiya S., Komai F., Hara R., Takeuchi K., Arita M., Imose N., Musashino K., Yuuki H., Oshima A., Sasaki N., Aotsuka S., Yoshikawa Y., Matsunawa H., Ichihara T., Shiohata N., Sano S., Moriya S., Momiyama H., Satoh N., Takami S., Terashima Y., Suzuki O., Nakagawa S., Senoh A., Mizoguchi H., Goto Y., Shimizu F., Wakebe H., Hishigaki H., Watanabe T., Sugiyama A., Takemoto M., Kawakami B., Yamazaki M., Watanabe K., Kumagai A., Itakura S., Fukuzumi Y., Fujimori Y., Komiyama M., Tashiro H., Tanigami A., Fujiwara T., Ono T., Yamada K., Fujii Y., Ozaki K., Hirao M., Ohmori Y., Kawabata A., Hikiji T., Kobatake N., Inagaki H., Ikema Y., Okamoto S., Okitani R., Kawakami T., Noguchi S., Itoh T., Shigeta K., Senba T., Matsumura K., Nakajima Y., Mizuno T., Morinaga M., Sasaki M., Togashi T., Oyama M., Hata H., Watanabe M., Komatsu T., Mizushima-Sugano J., Satoh T., Shirai Y., Takahashi Y., Nakagawa K., Okumura K., Nagase T., Nomura N., Kikuchi H., Masuho Y., Yamashita R., Nakai K., Yada T., Nakamura Y., Ohara O., Isogai T., Sugano S.
      Nat. Genet. 36:40-45(2004) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
      Tissue: Testis.
    2. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    3. "The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)."
      The MGC Project Team
      Genome Res. 14:2121-2127(2004) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
      Tissue: Testis.

    Entry informationi

    Entry nameiBD1L2_HUMAN
    AccessioniPrimary (citable) accession number: Q8IYS8
    Secondary accession number(s): B3KXU4, Q8WW13
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: November 22, 2005
    Last sequence update: February 6, 2007
    Last modified: October 1, 2014
    This is version 64 of the entry and version 2 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programChordata Protein Annotation Program
    DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.

    Miscellaneousi

    Caution

    Could be the product of a pseudogene.Curated

    Keywords - Technical termi

    Complete proteome, Reference proteome

    Documents

    1. Human chromosome 18
      Human chromosome 18: entries, gene names and cross-references to MIM
    2. SIMILARITY comments
      Index of protein domains and families

    External Data

    Dasty 3