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Unreviewed, UniProtKB/TrEMBL Q8IY78 (Q8IY78_HUMAN)

Last modified July 22, 2008. Version 35. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data | Customize display text xml rdf/xml gff fasta
Names and origin · Protein attributes · Ontologies · Sequences · References · Cross-references · Entry information

Names and origin

Protein namesSubmitted name:
    CDH7 protein EMBL AAH36786.1
OrganismHomo sapiens (Human) EMBL AAH36786.1
Taxonomic identifier9606 [NCBI]
Taxonomic lineageEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo

Protein attributes

Sequence length630 AA.
Sequence statusComplete.
Sequence processingThe displayed sequence is not processed.
Protein existenceEvidence at transcript level.

Ontologies

Keywords

   LigandCalcium RuleBase RU000484V3

Gene Ontology (GO)

   Biological processhomophilic cell adhesion

Inferred from electronic annotation. Source: InterPro

   Cellular componentmembrane

Inferred from electronic annotation. Source: InterPro

   Molecular functioncalcium ion binding

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
Q8IY78-1 [UniParc].

Last modified March 1, 2003. Version 1.
Checksum: 1EB6FD87A21A61D3

FASTA63069,218
        10         20         30         40         50         60 
MKLGKVEFCH FLQLIALFLC FSGMSQAELS RSRSKPYFQS GRSRTKRSWV WNQFFVLEEY 

        70         80         90        100        110        120 
MGSDPLYVGK LHSDVDKGDG SIKYILSGEG ASSIFIIDEN TGDIHATKRL DREEQAYYTL 

       130        140        150        160        170        180 
RAQALDRLTN EPVEPESEFV IKIQDINDNE PKFLDGPYTA GVPEMSPVGT SVVQVTATDA 

       190        200        210        220        230        240 
DDPTYGNSAR VVYSILQGQP YFSVEPKTGV IKTALPNMDR EAKDQYLLVI QAKDMVGQNG 

       250        260        270        280        290        300 
GLSGTTSVTV TLTDVNDNPP RFPRRSYQYN VPESLPVASV VARIKAADAD IGANAEMEYK 

       310        320        330        340        350        360 
IVDGDGLGIF KISVDKETQE GIITIQKELD FEAKTSYTLR IEAANKDADP RFLSLGPFSD 

       370        380        390        400        410        420 
TTTVKIIVED VDEPPVFSSP LYPMEVSEAT QVGNIIGTVA AHDPDSSNSP VRYSIDRNTD 

       430        440        450        460        470        480 
LERYFNIDAN SGVITTAKSL DRETNAIHNI TVLAMESQNP SQVGRGYVAI TILDINDNAP 

       490        500        510        520        530        540 
EFAMDYETTV CENAQPGQVI QKISAVDKDE PSNGHQFYFS LTTDATNNHN FSLKDNKDNT 

       550        560        570        580        590        600 
ASILTRRNGF RRQEQSVYYL PIFIVDSGSP SLSSTSTLTI RVCDCDADGV AQTCNAEAYV 

       610        620        630 
LPAGLSTGAL IAILACVLTL LGRYCFQGLL 

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References

[1]"The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)."
The MGC Project Team
Genome Res. 14:2121-2127(2004) [PubMed: 15489334] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
Tissue: Brain EMBL AAH36786.1.

Cross-references

Sequence databases

BC036786 mRNA. Translation: AAH36786.1.
UniGeneHs.657522

3D structure databases

HSSPHSSP built from PDB template 1NCI based on UniProtKB P15116.
ModBaseSearch...

Genome annotation databases

EnsemblENSG00000081138. Homo sapiens. [Contig view]

Organism-specific databases

HGNCHGNC:1766. CDH7.
GeneCardsSearch...

Phylogenomic databases

HOVERGENQ8IY78.

Gene expression databases

ArrayExpressQ8IY78.

Family and domain databases

InterProIPR002126. Cadherin.
[Graphical view]
Gene3DG3DSA:2.60.40.60. Cadherin. 5 hits.
PfamPF00028. Cadherin. 5 hits.
[Graphical view]
PRINTSPR00205. CADHERIN.
SMARTSM00112. CA. 5 hits.
[Graphical view]
PROSITEPS00232. CADHERIN_1. 3 hits.
PS50268. CADHERIN_2. 5 hits.
[Graphical view]

Entry information

Entry nameQ8IY78_HUMAN
AccessionPrimary (citable) accession number: Q8IY78
Entry history
Integrated into UniProtKB/TrEMBL: March 1, 2003
Last sequence update: March 1, 2003
Last modified: July 22, 2008
This is version 35 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
Names and origin · Protein attributes · Ontologies · Sequences · References · Cross-references · Entry information