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Q8IY47 (KBTB2_HUMAN) Reviewed, UniProtKB/Swiss-Prot

Last modified December 14, 2011. Version 78. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (4) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
Kelch repeat and BTB domain-containing protein 2
Alternative name(s):
BTB and kelch domain-containing protein 1
Gene names
Name:KBTBD2
Synonyms:BKLHD1, KIAA1489
ORF Names:CGI-73
OrganismHomo sapiens (Human)
Taxonomic identifier9606 [NCBI]
Taxonomic lineageEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo

Protein attributes

Sequence length623 AA.
Sequence statusComplete.
Protein existenceEvidence at transcript level

General annotation (Comments)

Sequence similarities

Contains 1 BTB (POZ) domain.

Contains 5 Kelch repeats.

Sequence caution

The sequence AAD34068.1 differs from that shown. Reason: Frameshift at position 328.

Ontologies

Keywords
   Coding sequence diversityPolymorphism
   DomainKelch repeat
Repeat
   Technical termComplete proteome
Reference proteome
Gene Ontology (GO)
None. [Check GOA]

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 623623Kelch repeat and BTB domain-containing protein 2
PRO_0000119077

Regions

Domain31 – 9868BTB
Repeat317 – 38064Kelch 1
Repeat381 – 42949Kelch 2
Repeat431 – 46939Kelch 3
Repeat470 – 52960Kelch 4
Repeat535 – 58147Kelch 5

Natural variations

Natural variant1661Q → K. Ref.3
Corresponds to variant rs17853781 [ dbSNP | Ensembl ].
VAR_037766
Natural variant1891E → G. Ref.3
Corresponds to variant rs17854425 [ dbSNP | Ensembl ].
VAR_037767
Natural variant1931T → P.
Corresponds to variant rs35477666 [ dbSNP | Ensembl ].
VAR_037768
Natural variant2541P → R. Ref.3
Corresponds to variant rs17857323 [ dbSNP | Ensembl ].
VAR_037769
Natural variant3011P → R. Ref.3
Corresponds to variant rs17857324 [ dbSNP | Ensembl ].
VAR_037770
Natural variant5341L → I. Ref.3
Corresponds to variant rs17854424 [ dbSNP | Ensembl ].
VAR_037771
Natural variant5941S → Y. Ref.3
Corresponds to variant rs17853783 [ dbSNP | Ensembl ].
VAR_037772

Experimental info

Sequence conflict1671D → V in AAD34068. Ref.4
Sequence conflict1811L → F in AAD34068. Ref.4
Sequence conflict2761S → A in CAB55994. Ref.6
Sequence conflict5431L → S in CAB55994. Ref.6

Sequences

Sequence LengthMass (Da)Tools
Q8IY47 [UniParc].

Last modified July 25, 2003. Version 2.
Checksum: A999ED0429B92772

FASTA62371,331
        10         20         30         40         50         60 
MSTQDERQIN TEYAVSLLEQ LKLFYEQQLF TDIVLIVEGT EFPCHKMVLA TCSSYFRAMF 

        70         80         90        100        110        120 
MSGLSESKQT HVHLRNVDAA TLQIIITYAY TGNLAMNDST VEQLYETACF LQVEDVLQRC 

       130        140        150        160        170        180 
REYLIKKINA ENCVRLLSFA DLFSCEELKQ SAKRMVEHKF TAVYHQDAFM QLSHDLLIDI 

       190        200        210        220        230        240 
LSSDNLNVEK EETVREAAML WLEYNTESRS QYLSSVLSQI RIDALSEVTQ RAWFQGLPPN 

       250        260        270        280        290        300 
DKSVVVQGLY KSMPKFFKPR LGMTKEEMMI FIEASSENPC SLYSSVCYSP QAEKVYKLCS 

       310        320        330        340        350        360 
PPADLHKVGT VVTPDNDIYI AGGQVPLKNT KTNHSKTSKL QTAFRTVNCF YWFDAQQNTW 

       370        380        390        400        410        420 
FPKTPMLFVR IKPSLVCCEG YIYAIGGDSV GGELNRRTVE RYDTEKDEWT MVSPLPCAWQ 

       430        440        450        460        470        480 
WSAAVVVHDC IYVMTLNLMY CYFPRSDSWV EMAMRQTSRS FASAAAFGDK IFYIGGLHIA 

       490        500        510        520        530        540 
TNSGIRLPSG TVDGSSVTVE IYDVNKNEWK MAANIPAKRY SDPCVRAVVI SNSLCVFMRE 

       550        560        570        580        590        600 
THLNERAKYV TYQYDLELDR WSLRQHISER VLWDLGRDFR CTVGKLYPSC LEESPWKPPT 

       610        620 
YLFSTDGTEE FELDGEMVAL PPV 

« Hide

References

[1]"Complete sequencing and characterization of 21,243 full-length human cDNAs."
Ota T., Suzuki Y., Nishikawa T., Otsuki T., Sugiyama T., Irie R., Wakamatsu A., Hayashi K., Sato H., Nagai K., Kimura K., Makita H., Sekine M., Obayashi M., Nishi T., Shibahara T., Tanaka T., Ishii S. expand/collapse author list , Yamamoto J., Saito K., Kawai Y., Isono Y., Nakamura Y., Nagahari K., Murakami K., Yasuda T., Iwayanagi T., Wagatsuma M., Shiratori A., Sudo H., Hosoiri T., Kaku Y., Kodaira H., Kondo H., Sugawara M., Takahashi M., Kanda K., Yokoi T., Furuya T., Kikkawa E., Omura Y., Abe K., Kamihara K., Katsuta N., Sato K., Tanikawa M., Yamazaki M., Ninomiya K., Ishibashi T., Yamashita H., Murakawa K., Fujimori K., Tanai H., Kimata M., Watanabe M., Hiraoka S., Chiba Y., Ishida S., Ono Y., Takiguchi S., Watanabe S., Yosida M., Hotuta T., Kusano J., Kanehori K., Takahashi-Fujii A., Hara H., Tanase T.-O., Nomura Y., Togiya S., Komai F., Hara R., Takeuchi K., Arita M., Imose N., Musashino K., Yuuki H., Oshima A., Sasaki N., Aotsuka S., Yoshikawa Y., Matsunawa H., Ichihara T., Shiohata N., Sano S., Moriya S., Momiyama H., Satoh N., Takami S., Terashima Y., Suzuki O., Nakagawa S., Senoh A., Mizoguchi H., Goto Y., Shimizu F., Wakebe H., Hishigaki H., Watanabe T., Sugiyama A., Takemoto M., Kawakami B., Yamazaki M., Watanabe K., Kumagai A., Itakura S., Fukuzumi Y., Fujimori Y., Komiyama M., Tashiro H., Tanigami A., Fujiwara T., Ono T., Yamada K., Fujii Y., Ozaki K., Hirao M., Ohmori Y., Kawabata A., Hikiji T., Kobatake N., Inagaki H., Ikema Y., Okamoto S., Okitani R., Kawakami T., Noguchi S., Itoh T., Shigeta K., Senba T., Matsumura K., Nakajima Y., Mizuno T., Morinaga M., Sasaki M., Togashi T., Oyama M., Hata H., Watanabe M., Komatsu T., Mizushima-Sugano J., Satoh T., Shirai Y., Takahashi Y., Nakagawa K., Okumura K., Nagase T., Nomura N., Kikuchi H., Masuho Y., Yamashita R., Nakai K., Yada T., Nakamura Y., Ohara O., Isogai T., Sugano S.
Nat. Genet. 36:40-45(2004) [PubMed: 14702039] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
Tissue: Trachea.
[2]Mural R.J., Istrail S., Sutton G.G., Florea L., Halpern A.L., Mobarry C.M., Lippert R., Walenz B., Shatkay H., Dew I., Miller J.R., Flanigan M.J., Edwards N.J., Bolanos R., Fasulo D., Halldorsson B.V., Hannenhalli S., Turner R. expand/collapse author list , Yooseph S., Lu F., Nusskern D.R., Shue B.C., Zheng X.H., Zhong F., Delcher A.L., Huson D.H., Kravitz S.A., Mouchard L., Reinert K., Remington K.A., Clark A.G., Waterman M.S., Eichler E.E., Adams M.D., Hunkapiller M.W., Myers E.W., Venter J.C.
Submitted (JUL-2005) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
[3]"The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)."
The MGC Project Team
Genome Res. 14:2121-2127(2004) [PubMed: 15489334] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA], VARIANTS LYS-166; GLY-189; ARG-254; ARG-301; ILE-534 AND TYR-594.
Tissue: Brain.
[4]"Identification of novel human genes evolutionarily conserved in Caenorhabditis elegans by comparative proteomics."
Lai C.-H., Chou C.-Y., Ch'ang L.-Y., Liu C.-S., Lin W.-C.
Genome Res. 10:703-713(2000) [PubMed: 10810093] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] OF 1-376.
[5]"Prediction of the coding sequences of unidentified human genes. XVII. The complete sequences of 100 new cDNA clones from brain which code for large proteins in vitro."
Nagase T., Kikuno R., Ishikawa K., Hirosawa M., Ohara O.
DNA Res. 7:143-150(2000) [PubMed: 10819331] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] OF 113-623.
Tissue: Brain.
[6]"The full-ORF clone resource of the German cDNA consortium."
Bechtel S., Rosenfelder H., Duda A., Schmidt C.P., Ernst U., Wellenreuther R., Mehrle A., Schuster C., Bahr A., Bloecker H., Heubner D., Hoerlein A., Michel G., Wedler H., Koehrer K., Ottenwaelder B., Poustka A., Wiemann S., Schupp I.
BMC Genomics 8:399-399(2007) [PubMed: 17974005] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] OF 276-623.
Tissue: Kidney.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AK292802 mRNA. Translation: BAF85491.1.
CH471073 Genomic DNA. Translation: EAW94000.1.
BC037887 mRNA. Translation: AAH37887.1.
BC047107 mRNA. Translation: AAH47107.1.
AF151831 mRNA. Translation: AAD34068.1. Frameshift.
AB040922 mRNA. Translation: BAA96013.1.
AL117562 mRNA. Translation: CAB55994.1.
IPIIPI00293363.
PIRT17304.
RefSeqNP_056298.2. NM_015483.2.
UniGeneHs.372541.

3D structure databases

ProteinModelPortalQ8IY47.
SMRQ8IY47. Positions 5-238, 269-469.
ModBaseSearch...

Protein-protein interaction databases

STRINGQ8IY47.

PTM databases

PhosphoSiteQ8IY47.

Polymorphism databases

DMDM33301029.

Proteomic databases

PRIDEQ8IY47.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblENST00000304056; ENSP00000302586; ENSG00000170852.
GeneID25948.
KEGGhsa:25948.

Organism-specific databases

CTD25948.
GeneCardsGC07M032874.
H-InvDBHIX0006584.
HGNCHGNC:21751. KBTBD2.
HPAHPA021133.
neXtProtNX_Q8IY47.
PharmGKBPA134892896.
HUGESearch...
GenAtlasSearch...

Phylogenomic databases

eggNOGprNOG12240.
HOGENOMHBG268114.
HOVERGENHBG052211.
InParanoidQ8IY47.
OMAAYAYTGN.
OrthoDBEOG47D9FP.
PhylomeDBQ8IY47.

Gene expression databases

ArrayExpressQ8IY47.
BgeeQ8IY47.
CleanExHS_KBTBD2.
GenevestigatorQ8IY47.
GermOnlineENSG00000170852. Homo sapiens.

Family and domain databases

InterProIPR011705. BACK.
IPR000210. BTB/POZ-like.
IPR011333. BTB/POZ_fold.
IPR013069. BTB_POZ.
IPR017096. Kelch-like_gigaxonin.
IPR015915. Kelch-typ_b-propeller.
IPR006652. Kelch_1.
[Graphical view]
Gene3DG3DSA:3.30.710.10. BTB/POZ_fold. 1 hit.
G3DSA:2.120.10.80. Kelch-typ_b-propeller. 1 hit.
KOK10470.
PfamPF07707. BACK. 1 hit.
PF00651. BTB. 1 hit.
PF01344. Kelch_1. 2 hits.
[Graphical view]
PIRSFPIRSF037037. Kelch-like_protein_gigaxonin. 1 hit.
SMARTSM00875. BACK. 1 hit.
SM00225. BTB. 1 hit.
SM00612. Kelch. 4 hits.
[Graphical view]
SUPFAMSSF54695. BTB/POZ_fold. 1 hit.
PROSITEPS50097. BTB. 1 hit.
[Graphical view]
ProtoNetSearch...

Other

NextBio47542.

Entry information

Entry nameKBTB2_HUMAN
AccessionPrimary (citable) accession number: Q8IY47
Secondary accession number(s): A8K9T7 expand/collapse secondary AC list , Q86Y62, Q9P239, Q9UFM7, Q9Y382
Entry history
Integrated into UniProtKB/Swiss-Prot: July 25, 2003
Last sequence update: July 25, 2003
Last modified: December 14, 2011
This is version 78 of the entry and version 2 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.

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Human chromosome 7: entries, gene names and cross-references to MIM

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List of human entries with polymorphisms or disease mutations

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Index of human polymorphisms and disease mutations

SIMILARITY comments

Index of protein domains and families