Q8IY47 (KBTB2_HUMAN) Reviewed, UniProtKB/Swiss-Prot
Last modified
December 14, 2011.
Version 78.
History...
Names·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order
Names·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize orderNames and origin
| Protein names | Recommended name: Kelch repeat and BTB domain-containing protein 2 Alternative name(s): BTB and kelch domain-containing protein 1 | ||||||
| Gene names |
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| Organism | Homo sapiens (Human) | ||||||
| Taxonomic identifier | 9606 [NCBI] | ||||||
| Taxonomic lineage | Eukaryota › Metazoa › Chordata › Craniata › Vertebrata › Euteleostomi › Mammalia › Eutheria › Euarchontoglires › Primates › Haplorrhini › Catarrhini › Hominidae › Homo |
Protein attributes
| Sequence length | 623 AA. |
| Sequence status | Complete. |
| Protein existence | Evidence at transcript level |
General annotation (Comments)
| Sequence similarities | Contains 1 BTB (POZ) domain. Contains 5 Kelch repeats. |
| Sequence caution | The sequence AAD34068.1 differs from that shown. Reason: Frameshift at position 328. |
Ontologies
| Keywords | |
|---|---|
| Coding sequence diversity | Polymorphism |
| Domain | Kelch repeat Repeat |
| Technical term | Complete proteome Reference proteome |
| Gene Ontology (GO) | |
| None. [Check GOA] | |
Sequence annotation (Features)
| Feature key | Position(s) | Length | Description | Graphical view | Feature identifier | ||||
Molecule processing | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| Chain | 1 – 623 | 623 | Kelch repeat and BTB domain-containing protein 2 | PRO_0000119077 | |||||
Regions | |||||||||
| Domain | 31 – 98 | 68 | BTB | ||||||
| Repeat | 317 – 380 | 64 | Kelch 1 | ||||||
| Repeat | 381 – 429 | 49 | Kelch 2 | ||||||
| Repeat | 431 – 469 | 39 | Kelch 3 | ||||||
| Repeat | 470 – 529 | 60 | Kelch 4 | ||||||
| Repeat | 535 – 581 | 47 | Kelch 5 | ||||||
Natural variations | |||||||||
| Natural variant | 166 | 1 | Q → K. Ref.3 Corresponds to variant rs17853781 [ dbSNP | Ensembl ]. | VAR_037766 | |||||
| Natural variant | 189 | 1 | E → G. Ref.3 Corresponds to variant rs17854425 [ dbSNP | Ensembl ]. | VAR_037767 | |||||
| Natural variant | 193 | 1 | T → P. Corresponds to variant rs35477666 [ dbSNP | Ensembl ]. | VAR_037768 | |||||
| Natural variant | 254 | 1 | P → R. Ref.3 Corresponds to variant rs17857323 [ dbSNP | Ensembl ]. | VAR_037769 | |||||
| Natural variant | 301 | 1 | P → R. Ref.3 Corresponds to variant rs17857324 [ dbSNP | Ensembl ]. | VAR_037770 | |||||
| Natural variant | 534 | 1 | L → I. Ref.3 Corresponds to variant rs17854424 [ dbSNP | Ensembl ]. | VAR_037771 | |||||
| Natural variant | 594 | 1 | S → Y. Ref.3 Corresponds to variant rs17853783 [ dbSNP | Ensembl ]. | VAR_037772 | |||||
Experimental info | |||||||||
| Sequence conflict | 167 | 1 | D → V in AAD34068. Ref.4 | ||||||
| Sequence conflict | 181 | 1 | L → F in AAD34068. Ref.4 | ||||||
| Sequence conflict | 276 | 1 | S → A in CAB55994. Ref.6 | ||||||
| Sequence conflict | 543 | 1 | L → S in CAB55994. Ref.6 | ||||||
Sequences
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References
| [1] | "Complete sequencing and characterization of 21,243 full-length human cDNAs." Ota T., Suzuki Y., Nishikawa T., Otsuki T., Sugiyama T., Irie R., Wakamatsu A., Hayashi K., Sato H., Nagai K., Kimura K., Makita H., Sekine M., Obayashi M., Nishi T., Shibahara T., Tanaka T., Ishii S. Sugano S.Nat. Genet. 36:40-45(2004) [PubMed: 14702039] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA]. Tissue: Trachea. |
| [2] | Mural R.J., Istrail S., Sutton G.G., Florea L., Halpern A.L., Mobarry C.M., Lippert R., Walenz B., Shatkay H., Dew I., Miller J.R., Flanigan M.J., Edwards N.J., Bolanos R., Fasulo D., Halldorsson B.V., Hannenhalli S., Turner R. Venter J.C.Submitted (JUL-2005) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. |
| [3] | "The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)." The MGC Project Team Genome Res. 14:2121-2127(2004) [PubMed: 15489334] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA], VARIANTS LYS-166; GLY-189; ARG-254; ARG-301; ILE-534 AND TYR-594. Tissue: Brain. |
| [4] | "Identification of novel human genes evolutionarily conserved in Caenorhabditis elegans by comparative proteomics." Lai C.-H., Chou C.-Y., Ch'ang L.-Y., Liu C.-S., Lin W.-C. Genome Res. 10:703-713(2000) [PubMed: 10810093] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] OF 1-376. |
| [5] | "Prediction of the coding sequences of unidentified human genes. XVII. The complete sequences of 100 new cDNA clones from brain which code for large proteins in vitro." Nagase T., Kikuno R., Ishikawa K., Hirosawa M., Ohara O. DNA Res. 7:143-150(2000) [PubMed: 10819331] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] OF 113-623. Tissue: Brain. |
| [6] | "The full-ORF clone resource of the German cDNA consortium." Bechtel S., Rosenfelder H., Duda A., Schmidt C.P., Ernst U., Wellenreuther R., Mehrle A., Schuster C., Bahr A., Bloecker H., Heubner D., Hoerlein A., Michel G., Wedler H., Koehrer K., Ottenwaelder B., Poustka A., Wiemann S., Schupp I. BMC Genomics 8:399-399(2007) [PubMed: 17974005] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] OF 276-623. Tissue: Kidney. |
Cross-references
Sequence databases | |
|---|---|
| EMBL GenBank DDBJ | AK292802 mRNA. Translation: BAF85491.1. CH471073 Genomic DNA. Translation: EAW94000.1. BC037887 mRNA. Translation: AAH37887.1. BC047107 mRNA. Translation: AAH47107.1. AF151831 mRNA. Translation: AAD34068.1. Frameshift. AB040922 mRNA. Translation: BAA96013.1. AL117562 mRNA. Translation: CAB55994.1. |
| IPI | IPI00293363. |
| PIR | T17304. |
| RefSeq | NP_056298.2. NM_015483.2. |
| UniGene | Hs.372541. |
3D structure databases | |
| ProteinModelPortal | Q8IY47. |
| SMR | Q8IY47. Positions 5-238, 269-469. |
| ModBase | Search... |
Protein-protein interaction databases | |
| STRING | Q8IY47. |
PTM databases | |
| PhosphoSite | Q8IY47. |
Polymorphism databases | |
| DMDM | 33301029. |
Proteomic databases | |
| PRIDE | Q8IY47. |
Protocols and materials databases | |
| StructuralBiologyKnowledgebase | Search... |
Genome annotation databases | |
| Ensembl | ENST00000304056; ENSP00000302586; ENSG00000170852. |
| GeneID | 25948. |
| KEGG | hsa:25948. |
Organism-specific databases | |
| CTD | 25948. |
| GeneCards | GC07M032874. |
| H-InvDB | HIX0006584. |
| HGNC | HGNC:21751. KBTBD2. |
| HPA | HPA021133. |
| neXtProt | NX_Q8IY47. |
| PharmGKB | PA134892896. |
| HUGE | Search... |
| GenAtlas | Search... |
Phylogenomic databases | |
| eggNOG | prNOG12240. |
| HOGENOM | HBG268114. |
| HOVERGEN | HBG052211. |
| InParanoid | Q8IY47. |
| OMA | AYAYTGN. |
| OrthoDB | EOG47D9FP. |
| PhylomeDB | Q8IY47. |
Gene expression databases | |
| ArrayExpress | Q8IY47. |
| Bgee | Q8IY47. |
| CleanEx | HS_KBTBD2. |
| Genevestigator | Q8IY47. |
| GermOnline | ENSG00000170852. Homo sapiens. |
Family and domain databases | |
| InterPro | IPR011705. BACK. IPR000210. BTB/POZ-like. IPR011333. BTB/POZ_fold. IPR013069. BTB_POZ. IPR017096. Kelch-like_gigaxonin. IPR015915. Kelch-typ_b-propeller. IPR006652. Kelch_1. [Graphical view] |
| Gene3D | G3DSA:3.30.710.10. BTB/POZ_fold. 1 hit. G3DSA:2.120.10.80. Kelch-typ_b-propeller. 1 hit. |
| KO | K10470. |
| Pfam | PF07707. BACK. 1 hit. PF00651. BTB. 1 hit. PF01344. Kelch_1. 2 hits. [Graphical view] |
| PIRSF | PIRSF037037. Kelch-like_protein_gigaxonin. 1 hit. |
| SMART | SM00875. BACK. 1 hit. SM00225. BTB. 1 hit. SM00612. Kelch. 4 hits. [Graphical view] |
| SUPFAM | SSF54695. BTB/POZ_fold. 1 hit. |
| PROSITE | PS50097. BTB. 1 hit. [Graphical view] |
| ProtoNet | Search... |
Other | |
| NextBio | 47542. |
Entry information
| Entry name | KBTB2_HUMAN | ||||||||
| Accession | Primary (citable) accession number: Q8IY47 Secondary accession number(s): A8K9T7 Q9Y382 | ||||||||
| Entry history |
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| Entry status | Reviewed (UniProtKB/Swiss-Prot) | ||||||||
| Annotation program | Chordata Protein Annotation Program | ||||||||
| Disclaimer | Any medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care. | ||||||||
Relevant documents
| Human chromosome 7 Human chromosome 7: entries, gene names and cross-references to MIM |
| Human entries with polymorphisms or disease mutations List of human entries with polymorphisms or disease mutations |
| Human polymorphisms and disease mutations Index of human polymorphisms and disease mutations |
| SIMILARITY comments Index of protein domains and families |

Clusters with