Q8IVT5 (KSR1_HUMAN) Reviewed, UniProtKB/Swiss-Prot
Last modified
May 1, 2013.
Version 101.
History...
Names·Attributes·General annotation·Ontologies·Interactions·Alt products·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order
Names·Attributes·General annotation·Ontologies·Interactions·Alt products·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize orderNames and origin
| Protein names | Recommended name: Kinase suppressor of Ras 1 | ||||
| Gene names |
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| Organism | Homo sapiens (Human) [Reference proteome] | ||||
| Taxonomic identifier | 9606 [NCBI] | ||||
| Taxonomic lineage | Eukaryota › Metazoa › Chordata › Craniata › Vertebrata › Euteleostomi › Mammalia › Eutheria › Euarchontoglires › Primates › Haplorrhini › Catarrhini › Hominidae › Homo![]() |
Protein attributes
| Sequence length | 921 AA. |
| Sequence status | Complete. |
| Protein existence | Evidence at protein level |
General annotation (Comments)
| Function | Location-regulated scaffolding protein connecting MEK to RAF. Promotes MEK and RAF phosphorylation and activity through assembly of an activated signaling complex. By itself, it has no demonstrated kinase activity. |
| Subunit structure | Interacts with HSPCA/HSP90, YWHAB/14-3-3, CDC37, MAP2K/MEK, MARK3, PPP2R1A and PPP2CA. Also interacts with RAF and MAPK/ERK, in a Ras-dependent manner By similarity. The binding of 14-3-3 proteins to phosphorylated KSR prevents the membrane localization. Interacts with isoform 1 of VRK2. Ref.11 |
| Subcellular location | Cytoplasm. Membrane; Peripheral membrane protein By similarity. Endoplasmic reticulum membrane. Note: In unstimulated cells, where the phosphorylated form is bound to a 14-3-3 protein, sequestration in the cytoplasm occurs. Following growth factor treatment, the protein is free for membrane translocation, and it moves from the cytoplasm to the cell periphery By similarity. Ref.11 |
| Domain | The protein kinase domain is predicted to be catalytically inactive. |
| Post-translational modification | Phosphorylated on Ser-309 and, to a higher extent, on Ser-404 by MARK3. Dephosphorylated on Ser-404 by PPP2CA. In resting cells, phosphorylated KSR1 is cytoplasmic and in stimulated cells, dephosphorylated KSR1 is membrane-associated By similarity. |
| Sequence similarities | Belongs to the protein kinase superfamily. TKL Ser/Thr protein kinase family. Contains 1 phorbol-ester/DAG-type zinc finger. Contains 1 protein kinase domain. |
Ontologies
| Keywords | |
|---|---|
| Cellular component | Cytoplasm Endoplasmic reticulum Membrane |
| Coding sequence diversity | Alternative splicing Polymorphism |
| Domain | Zinc-finger |
| Ligand | Metal-binding Zinc |
| PTM | Phosphoprotein |
| Technical term | Complete proteome Reference proteome |
| Gene Ontology (GO) | |
| Biological_process | Ras protein signal transduction Non-traceable author statement Ref.3. Source: UniProtKB |
| Cellular_component | endoplasmic reticulum membrane Inferred from electronic annotation. Source: UniProtKB-SubCell intracellularNon-traceable author statement. Source: UniProtKB |
| Molecular_function | ATP binding Non-traceable author statement. Source: UniProtKB metal ion bindingInferred from electronic annotation. Source: UniProtKB-KW protein kinase activityNon-traceable author statement Ref.3. Source: UniProtKB protein serine/threonine kinase activityInferred from electronic annotation. Source: InterPro |
| Complete GO annotation... | |
Binary interactions
With | Entry | #Exp. | IntAct | Notes |
|---|---|---|---|---|
| VRK2 | Q86Y07 | 4 | EBI-486984,EBI-1207615 |
Alternative products
| This entry describes 3 isoforms produced by alternative splicing. [Align] [Select] | ||||||
| Isoform 1 (identifier: Q8IVT5-1) This isoform has been chosen as the 'canonical' sequence. All positional information in this entry refers to it. This is also the sequence that appears in the downloadable versions of the entry. | ||||||
| Isoform 2 (identifier: Q8IVT5-2) The sequence of this isoform differs from the canonical sequence as follows: 502-524: VPSAGHCWKCLLIAESLKENAFN → D 897-921: INSSKVVPRFERFGLGVLESSNPKM → L | ||||||
| Note: No experimental confirmation available. | ||||||
| Isoform 3 (identifier: Q8IVT5-3) The sequence of this isoform differs from the canonical sequence as follows: 1-135: Missing. | ||||||
| Note: No experimental confirmation available. |
Sequence annotation (Features)
| Feature key | Position(s) | Length | Description | Graphical view | Feature identifier | ||||
Molecule processing | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| Chain | 1 – 921 | 921 | Kinase suppressor of Ras 1 | PRO_0000086229 | |||||
Regions | |||||||||
| Domain | 611 – 881 | 271 | Protein kinase | ||||||
| Zinc finger | 345 – 389 | 45 | Phorbol-ester/DAG-type | ||||||
| Compositional bias | 17 – 21 | 5 | Poly-Gly | ||||||
| Compositional bias | 287 – 290 | 4 | Poly-Pro | ||||||
Sites | |||||||||
| Metal binding | 346 | 1 | Zinc 1 By similarity | ||||||
| Metal binding | 358 | 1 | Zinc 2 By similarity | ||||||
| Metal binding | 361 | 1 | Zinc 2 By similarity | ||||||
| Metal binding | 371 | 1 | Zinc 1 By similarity | ||||||
| Metal binding | 374 | 1 | Zinc 1 By similarity | ||||||
| Metal binding | 379 | 1 | Zinc 2 By similarity | ||||||
| Metal binding | 382 | 1 | Zinc 2 By similarity | ||||||
| Metal binding | 389 | 1 | Zinc 1 By similarity | ||||||
Amino acid modifications | |||||||||
| Modified residue | 268 | 1 | Phosphothreonine Ref.6 Ref.7 Ref.8 | ||||||
| Modified residue | 272 | 1 | Phosphothreonine Ref.8 | ||||||
| Modified residue | 309 | 1 | Phosphoserine Ref.5 Ref.13 | ||||||
| Modified residue | 332 | 1 | Phosphoserine Ref.6 Ref.8 | ||||||
| Modified residue | 404 | 1 | Phosphoserine Ref.8 Ref.10 | ||||||
| Modified residue | 567 | 1 | Phosphoserine Ref.8 | ||||||
Natural variations | |||||||||
| Alternative sequence | 1 – 135 | 135 | Missing in isoform 3. | VSP_012229 | |||||
| Alternative sequence | 502 – 524 | 23 | VPSAG…ENAFN → D in isoform 2. | VSP_012230 | |||||
| Alternative sequence | 897 – 921 | 25 | INSSK…SNPKM → L in isoform 2. | VSP_012231 | |||||
| Natural variant | 225 | 1 | S → P. Ref.14 | VAR_040658 | |||||
| Natural variant | 357 | 1 | V → A. Ref.14 | VAR_046048 | |||||
| Natural variant | 661 | 1 | Q → H. Ref.14 | VAR_046049 | |||||
Experimental info | |||||||||
| Sequence conflict | 241 – 263 | 23 | FSEGL…TPRAL → EFRHTSALTQHTAHTQHTSA HTQ Ref.3 | ||||||
Sequences
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References
| « Hide 'large scale' references | |
| [1] | "DNA sequence of human chromosome 17 and analysis of rearrangement in the human lineage." Zody M.C., Garber M., Adams D.J., Sharpe T., Harrow J., Lupski J.R., Nicholson C., Searle S.M., Wilming L., Young S.K., Abouelleil A., Allen N.R., Bi W., Bloom T., Borowsky M.L., Bugalter B.E., Butler J., Chang J.L. Nusbaum C.Nature 440:1045-1049(2006) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. |
| [2] | "The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)." The MGC Project Team Genome Res. 14:2121-2127(2004) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] (ISOFORM 3). Tissue: Brain. |
| [3] | "KSR, a novel protein kinase required for RAS signal transduction." Therrien M., Chang H.C., Solomon N.M., Karim F.D., Wassarman D.A., Rubin G.M. Cell 83:879-888(1995) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [MRNA] OF 241-897 (ISOFORM 2). |
| [4] | "MAP kinase module: the Ksr connection." Roy F., Therrien M. Curr. Biol. 12:R325-R327(2002) [PubMed] [Europe PMC] [Abstract] Cited for: REVIEW. |
| [5] | "Global, in vivo, and site-specific phosphorylation dynamics in signaling networks." Olsen J.V., Blagoev B., Gnad F., Macek B., Kumar C., Mortensen P., Mann M. Cell 127:635-648(2006) [PubMed] [Europe PMC] [Abstract] Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-309, MASS SPECTROMETRY. Tissue: Cervix carcinoma. |
| [6] | "Combining protein-based IMAC, peptide-based IMAC, and MudPIT for efficient phosphoproteomic analysis." Cantin G.T., Yi W., Lu B., Park S.K., Xu T., Lee J.-D., Yates J.R. III J. Proteome Res. 7:1346-1351(2008) [PubMed] [Europe PMC] [Abstract] Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT THR-268 AND SER-332, MASS SPECTROMETRY. Tissue: Cervix carcinoma. |
| [7] | "Phosphoproteome of resting human platelets." Zahedi R.P., Lewandrowski U., Wiesner J., Wortelkamp S., Moebius J., Schuetz C., Walter U., Gambaryan S., Sickmann A. J. Proteome Res. 7:526-534(2008) [PubMed] [Europe PMC] [Abstract] Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT THR-268, MASS SPECTROMETRY. Tissue: Platelet. |
| [8] | "A quantitative atlas of mitotic phosphorylation." Dephoure N., Zhou C., Villen J., Beausoleil S.A., Bakalarski C.E., Elledge S.J., Gygi S.P. Proc. Natl. Acad. Sci. U.S.A. 105:10762-10767(2008) [PubMed] [Europe PMC] [Abstract] Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT THR-268; THR-272; SER-332; SER-404 AND SER-567, MASS SPECTROMETRY. Tissue: Cervix carcinoma. |
| [9] | "Large-scale proteomics analysis of the human kinome." Oppermann F.S., Gnad F., Olsen J.V., Hornberger R., Greff Z., Keri G., Mann M., Daub H. Mol. Cell. Proteomics 8:1751-1764(2009) [PubMed] [Europe PMC] [Abstract] Cited for: IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS]. |
| [10] | "Quantitative phosphoproteomic analysis of T cell receptor signaling reveals system-wide modulation of protein-protein interactions." Mayya V., Lundgren D.H., Hwang S.-I., Rezaul K., Wu L., Eng J.K., Rodionov V., Han D.K. Sci. Signal. 2:RA46-RA46(2009) [PubMed] [Europe PMC] [Abstract] Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-404, MASS SPECTROMETRY. Tissue: Leukemic T-cell. |
| [11] | "VRK2 inhibits mitogen-activated protein kinase signaling and inversely correlates with ErbB2 in human breast cancer." Fernandez I.F., Blanco S., Lozano J., Lazo P.A. Mol. Cell. Biol. 30:4687-4697(2010) [PubMed] [Europe PMC] [Abstract] Cited for: SUBCELLULAR LOCATION, INTERACTION WITH VRK2. |
| [12] | "Initial characterization of the human central proteome." Burkard T.R., Planyavsky M., Kaupe I., Breitwieser F.P., Buerckstuemmer T., Bennett K.L., Superti-Furga G., Colinge J. BMC Syst. Biol. 5:17-17(2011) [PubMed] [Europe PMC] [Abstract] Cited for: IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS]. |
| [13] | "System-wide temporal characterization of the proteome and phosphoproteome of human embryonic stem cell differentiation." Rigbolt K.T., Prokhorova T.A., Akimov V., Henningsen J., Johansen P.T., Kratchmarova I., Kassem M., Mann M., Olsen J.V., Blagoev B. Sci. Signal. 4:RS3-RS3(2011) [PubMed] [Europe PMC] [Abstract] Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-309, MASS SPECTROMETRY. |
| [14] | "Patterns of somatic mutation in human cancer genomes." Greenman C., Stephens P., Smith R., Dalgliesh G.L., Hunter C., Bignell G., Davies H., Teague J., Butler A., Stevens C., Edkins S., O'Meara S., Vastrik I., Schmidt E.E., Avis T., Barthorpe S., Bhamra G., Buck G. Stratton M.R.Nature 446:153-158(2007) [PubMed] [Europe PMC] [Abstract] Cited for: VARIANTS [LARGE SCALE ANALYSIS] PRO-225; ALA-357 AND HIS-661. |
| + | Additional computationally mapped references. |
Cross-references
Sequence databases | |
|---|---|
| EMBL GenBank DDBJ | AC069366 Genomic DNA. No translation available. AC015688 Genomic DNA. No translation available. BC042106 mRNA. Translation: AAH42106.1. U43586 mRNA. Translation: AAC50354.1. |
| IPI | IPI00013384. IPI00217124. IPI01015914. |
| RefSeq | NP_055053.1. NM_014238.1. |
| UniGene | Hs.133534. |
3D structure databases | |
| ProteinModelPortal | Q8IVT5. |
| ModBase | Search... |
Protein-protein interaction databases | |
| IntAct | Q8IVT5. 9 interactions. |
| STRING | 9606.ENSP00000268763. |
PTM databases | |
| PhosphoSite | Q8IVT5. |
Polymorphism databases | |
| DMDM | 56749095. |
Proteomic databases | |
| PaxDb | Q8IVT5. |
| PRIDE | Q8IVT5. |
Protocols and materials databases | |
| DNASU | 8844. |
| StructuralBiologyKnowledgebase | Search... |
Genome annotation databases | |
| Ensembl | ENST00000268763; ENSP00000268763; ENSG00000141068. |
| GeneID | 8844. |
| KEGG | hsa:8844. |
| UCSC | uc002gzm.3. human. |
Organism-specific databases | |
| CTD | 8844. |
| GeneCards | GC17P025783. |
| H-InvDB | HIX0018394. HIX0025516. HIX0029273. |
| HGNC | HGNC:6465. KSR1. |
| HPA | CAB009623. HPA011215. |
| MIM | 601132. gene. |
| neXtProt | NX_Q8IVT5. |
| PharmGKB | PA30254. |
| GenAtlas | Search... |
Phylogenomic databases | |
| eggNOG | COG0515. |
| HOGENOM | HOG000113263. |
| HOVERGEN | HBG052293. |
| InParanoid | Q8IVT5. |
| KO | K14958. |
Enzyme and pathway databases | |
| Pathway_Interaction_DB | ceramidepathway. Ceramide signaling pathway. |
Gene expression databases | |
| ArrayExpress | Q8IVT5. |
| Bgee | Q8IVT5. |
| CleanEx | HS_KSR1. |
| Genevestigator | Q8IVT5. |
| GermOnline | ENSG00000141068. Homo sapiens. |
Family and domain databases | |
| InterPro | IPR011009. Kinase-like_dom. IPR025561. KSR_SAM-like_dom. IPR002219. Prot_Kinase_C-like_PE/DAG-bd. IPR000719. Prot_kinase_cat_dom. IPR001245. Ser-Thr/Tyr_kinase_cat_dom. IPR008271. Ser/Thr_kinase_AS. [Graphical view] |
| Pfam | PF13543. KSR1-SAM. 1 hit. PF07714. Pkinase_Tyr. 1 hit. [Graphical view] |
| SMART | SM00109. C1. 1 hit. [Graphical view] |
| SUPFAM | SSF56112. Kinase_like. 1 hit. |
| PROSITE | PS50011. PROTEIN_KINASE_DOM. 1 hit. PS00108. PROTEIN_KINASE_ST. 1 hit. PS00479. ZF_DAG_PE_1. 1 hit. PS50081. ZF_DAG_PE_2. 1 hit. [Graphical view] |
| ProtoNet | Search... |
Other | |
| ChEMBL | CHEMBL1938215. |
| ChiTaRS | KSR1. human. |
| GenomeRNAi | 8844. |
| NextBio | 33204. |
| SOURCE | Search... |
Entry information
| Entry name | KSR1_HUMAN | ||||||||
| Accession | Primary (citable) accession number: Q8IVT5 Secondary accession number(s): Q13476 | ||||||||
| Entry history |
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| Entry status | Reviewed (UniProtKB/Swiss-Prot) | ||||||||
| Annotation program | Chordata Protein Annotation Program | ||||||||
| Disclaimer | Any medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care. | ||||||||
Relevant documents
| Human and mouse protein kinases Human and mouse protein kinases: classification and index |
| Human chromosome 17 Human chromosome 17: entries, gene names and cross-references to MIM |
| Human entries with polymorphisms or disease mutations List of human entries with polymorphisms or disease mutations |
| Human polymorphisms and disease mutations Index of human polymorphisms and disease mutations |
| MIM cross-references Online Mendelian Inheritance in Man (MIM) cross-references in UniProtKB/Swiss-Prot |
| SIMILARITY comments Index of protein domains and families |

Clusters with
