Q8IUG5 (MY18B_HUMAN) Reviewed, UniProtKB/Swiss-Prot
Last modified
May 1, 2013.
Version 103.
History...
Names·Attributes·General annotation·Ontologies·Alt products·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order
Names·Attributes·General annotation·Ontologies·Alt products·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize orderNames and origin
| Protein names | Recommended name: Unconventional myosin-XVIIIb | ||
| Gene names |
| ||
| Organism | Homo sapiens (Human) [Reference proteome] | ||
| Taxonomic identifier | 9606 [NCBI] | ||
| Taxonomic lineage | Eukaryota › Metazoa › Chordata › Craniata › Vertebrata › Euteleostomi › Mammalia › Eutheria › Euarchontoglires › Primates › Haplorrhini › Catarrhini › Hominidae › Homo![]() |
Protein attributes
| Sequence length | 2567 AA. |
| Sequence status | Complete. |
| Protein existence | Evidence at protein level |
General annotation (Comments)
| Function | May be involved in intracellular trafficking of the muscle cell when in the cytoplasm, whereas entering the nucleus, may be involved in the regulation of muscle specific genes. May play a role in the control of tumor development and progression; restored MYO18B expression in lung cancer cells suppresses anchorage-independent growth. Ref.1 |
| Subunit structure | Homodimer. May interact with F actin through the GPA motif (Gly/Pro/Ala-rich). |
| Subcellular location | Cytoplasm. Nucleus. Cytoplasm › myofibril › sarcomere. Note: Punctate pattern in undifferentiated myoblasts. Nuclear, on primary cardiomyocytes and adult muscle. A partial sarcomeric location was found in some cardiomyocytes. |
| Tissue specificity | Selectively expressed in cardiac and skeletal muscles. Weakly expressed in testis, pancreas, placenta, prostate, lung and thymus. |
| Developmental stage | Reaches an expression peak in the third day after induction and remains at similar level during successive myotubule maturation. |
| Miscellaneous | Frequently deleted, mutated, and hypermethylated in lung cancers. |
| Sequence similarities | Contains 1 IQ domain. Contains 1 myosin head-like domain. |
Ontologies
| Keywords | |
|---|---|
| Cellular component | Cytoplasm Nucleus |
| Coding sequence diversity | Alternative splicing Polymorphism |
| Domain | Coiled coil |
| Ligand | ATP-binding Actin-binding Nucleotide-binding |
| Molecular function | Motor protein Myosin |
| PTM | Phosphoprotein |
| Technical term | Complete proteome Reference proteome |
| Gene Ontology (GO) | |
| Cellular_component | cytoplasm Inferred from direct assay. Source: HPA nucleusInferred from direct assay. Source: HPA sarcomereInferred from electronic annotation. Source: UniProtKB-SubCell unconventional myosin complexInferred from direct assay Ref.2. Source: UniProtKB |
| Molecular_function | ATP binding Inferred from electronic annotation. Source: UniProtKB-KW motor activityInferred from electronic annotation. Source: InterPro |
| Complete GO annotation... | |
Alternative products
| This entry describes 2 isoforms produced by alternative splicing. [Align] [Select] | ||||||
| Isoform 1 (identifier: Q8IUG5-1) This isoform has been chosen as the 'canonical' sequence. All positional information in this entry refers to it. This is also the sequence that appears in the downloadable versions of the entry. | ||||||
| Isoform 2 (identifier: Q8IUG5-2) The sequence of this isoform differs from the canonical sequence as follows: 1-487: Missing. 488-503: PAPQEEGKGGQSRDSD → MGSGAICWFNLRDVGS | ||||||
| Note: No experimental confirmation available. |
Sequence annotation (Features)
| Feature key | Position(s) | Length | Description | Graphical view | Feature identifier | ||||
Molecule processing | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| Chain | 1 – 2567 | 2567 | Unconventional myosin-XVIIIb | PRO_0000123478 | |||||
Regions | |||||||||
| Domain | 573 – 1321 | 749 | Myosin head-like | ||||||
| Domain | 1336 – 1365 | 30 | IQ | ||||||
| Nucleotide binding | 660 – 667 | 8 | ATP Potential | ||||||
| Region | 1213 – 1240 | 28 | GPA Potential | ||||||
| Region | 1426 – 2083 | 658 | Tail | ||||||
| Coiled coil | 1396 – 1783 | 388 | Potential | ||||||
| Coiled coil | 1825 – 1961 | 137 | Potential | ||||||
| Coiled coil | 2014 – 2090 | 77 | Potential | ||||||
| Compositional bias | 71 – 114 | 44 | Ser-rich | ||||||
| Compositional bias | 799 – 804 | 6 | Poly-Ala | ||||||
| Compositional bias | 1217 – 1222 | 6 | Poly-Pro | ||||||
| Compositional bias | 1643 – 1769 | 127 | Gln-rich | ||||||
| Compositional bias | 2506 – 2514 | 9 | Poly-Ser | ||||||
Amino acid modifications | |||||||||
| Modified residue | 1829 | 1 | Phosphoserine Ref.10 | ||||||
Natural variations | |||||||||
| Alternative sequence | 1 – 487 | 487 | Missing in isoform 2. | VSP_007764 | |||||
| Alternative sequence | 488 – 503 | 16 | PAPQE…SRDSD → MGSGAICWFNLRDVGS in isoform 2. | VSP_007765 | |||||
| Natural variant | 44 | 1 | G → E. Corresponds to variant rs133885 [ dbSNP | Ensembl ]. | VAR_056190 | |||||
| Natural variant | 177 | 1 | P → L. Corresponds to variant rs13058434 [ dbSNP | Ensembl ]. | VAR_056191 | |||||
| Natural variant | 234 | 1 | G → V in a lung small cell carcinoma sample; somatic mutation. Ref.1 | VAR_015862 | |||||
| Natural variant | 347 | 1 | K → N in a lung small cell carcinoma sample; somatic mutation. Ref.1 | VAR_015863 | |||||
| Natural variant | 379 | 1 | R → Q in a lung small cell carcinoma sample; somatic mutation. Ref.1 | VAR_015864 | |||||
| Natural variant | 389 | 1 | W → C in a lung adenocarcinoma sample; somatic mutation. Ref.1 | VAR_015865 | |||||
| Natural variant | 547 | 1 | W → C. Ref.3 Ref.6 Corresponds to variant rs3859866 [ dbSNP | Ensembl ]. | VAR_056192 | |||||
| Natural variant | 590 | 1 | T → M in a lung large cell carcinoma sample; somatic mutation. Ref.1 | VAR_015866 | |||||
| Natural variant | 661 | 1 | R → W in a lung adenocarcinoma sample; somatic mutation. Ref.1 Ref.4 Corresponds to variant rs5761170 [ dbSNP | Ensembl ]. | VAR_015867 | |||||
| Natural variant | 835 | 1 | A → G in a lung squamous cell carcinoma sample; somatic mutation. Ref.1 | VAR_015868 | |||||
| Natural variant | 925 | 1 | S → L. Ref.2 Corresponds to variant rs9624909 [ dbSNP | Ensembl ]. | VAR_056193 | |||||
| Natural variant | 1037 | 1 | W → S. Corresponds to variant rs17704912 [ dbSNP | Ensembl ]. | VAR_056194 | |||||
| Natural variant | 1095 | 1 | R → L in a lung adenocarcinoma sample; somatic mutation. Ref.1 | VAR_015869 | |||||
| Natural variant | 1119 | 1 | H → Q. Ref.3 Ref.6 Corresponds to variant rs5761268 [ dbSNP | Ensembl ]. | VAR_056195 | |||||
| Natural variant | 1195 | 1 | R → Q in a lung small cell carcinoma sample; somatic mutation. Ref.1 | VAR_015870 | |||||
| Natural variant | 1238 | 1 | P → Q in a lung large cell carcinoma sample; somatic mutation. Ref.1 | VAR_015871 | |||||
| Natural variant | 1238 | 1 | P → T in a lung adenocarcinoma sample; somatic mutation. Ref.1 | VAR_015872 | |||||
| Natural variant | 1390 | 1 | S → F. Corresponds to variant rs35578357 [ dbSNP | Ensembl ]. | VAR_056196 | |||||
| Natural variant | 1399 | 1 | I → V. Corresponds to variant rs695633 [ dbSNP | Ensembl ]. | VAR_056197 | |||||
| Natural variant | 1444 | 1 | S → T. Corresponds to variant rs33928909 [ dbSNP | Ensembl ]. | VAR_056198 | |||||
| Natural variant | 1708 | 1 | E → K in a lung adenocarcinoma sample; somatic mutation. Ref.1 | VAR_015873 | |||||
| Natural variant | 1715 | 1 | E → D in a lung adenocarcinoma sample; somatic mutation. Ref.1 | VAR_015874 | |||||
| Natural variant | 1970 | 1 | A → E in a lung small cell carcinoma sample; somatic mutation. Ref.1 | VAR_015875 | |||||
| Natural variant | 2294 | 1 | A → D. Corresponds to variant rs35370367 [ dbSNP | Ensembl ]. | VAR_056199 | |||||
| Natural variant | 2295 | 1 | G → C in a lung small cell carcinoma sample; somatic mutation. Ref.1 | VAR_015876 | |||||
| Natural variant | 2347 | 1 | Q → R. Ref.6 Corresponds to variant rs2236005 [ dbSNP | Ensembl ]. | VAR_015877 | |||||
| Natural variant | 2381 | 1 | R → H in a lung adenocarcinoma sample; somatic mutation. Ref.1 | VAR_015878 | |||||
| Natural variant | 2395 | 1 | G → A. Corresponds to variant rs6004901 [ dbSNP | Ensembl ]. | VAR_056200 | |||||
| Natural variant | 2513 | 1 | G → S. Corresponds to variant rs7284177 [ dbSNP | Ensembl ]. | VAR_056201 | |||||
| Natural variant | 2532 | 1 | R → Q. Corresponds to variant rs34875296 [ dbSNP | Ensembl ]. | VAR_056202 | |||||
| Natural variant | 2554 | 1 | D → E in a lung large cell carcinoma sample; somatic mutation. Ref.1 | VAR_015879 | |||||
Experimental info | |||||||||
| Sequence conflict | 3 | 1 | I → M in CAC70712. Ref.2 | ||||||
| Sequence conflict | 828 | 1 | A → T in AAI50627. Ref.6 | ||||||
| Sequence conflict | 828 | 1 | A → T in AAI44598. Ref.6 | ||||||
| Sequence conflict | 1020 | 1 | Q → QQ in AAL75811. Ref.3 | ||||||
| Sequence conflict | 1060 | 1 | A → T in AAL75811. Ref.3 | ||||||
| Sequence conflict | 1510 | 1 | N → D in AAL75811. Ref.3 | ||||||
| Sequence conflict | 1515 | 1 | Missing in AAI50627. Ref.6 | ||||||
| Sequence conflict | 1515 | 1 | Missing in AAI44598. Ref.6 | ||||||
| Sequence conflict | 2343 – 2344 | 2 | KS → LT Ref.5 | ||||||
Sequences
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References
| « Hide 'large scale' references | |
| [1] | "MYO18B, a candidate tumor suppressor gene at chromosome 22q12.1, deleted, mutated, and methylated in human lung cancer." Nishioka M., Kohno T., Tani M., Yanaihara N., Tomizawa Y., Otsuka A., Sasaki S., Kobayashi K., Niki T., Maeshima A., Sekido Y., Minna J.D., Sone S., Yokota J. Proc. Natl. Acad. Sci. U.S.A. 99:12269-12274(2002) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA / MRNA] (ISOFORMS 1 AND 2), VARIANTS VAL-234; ASN-347; GLN-379; CYS-389; MET-590; TRP-661; GLY-835; LEU-1095; GLN-1195; GLN-1238; THR-1238; LYS-1708; ASP-1715; GLU-1970; CYS-2295; HIS-2381 AND GLU-2554, POSSIBLE ROLE IN TUMOR SUPPRESSION. Tissue: Skeletal muscle. |
| [2] | "Human MYO18B, a novel unconventional myosin heavy chain expressed in striated muscles moves into the myonuclei upon differentiation." Salamon M., Millino C., Raffaello A., Mongillo M., Sandri C., Bean C., Negrisolo E., Pallavicini A., Valle G., Zaccolo M., Schiaffino S., Lanfranchi G. J. Mol. Biol. 326:137-149(2003) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA / MRNA] (ISOFORM 1), CHARACTERIZATION, VARIANT LEU-925. Tissue: Skeletal muscle. |
| [3] | "Myosin-like gene expressed in human heart and muscle." Gu Y., Ji Y., Penn S.G., Hanzel D.K., Rank D.R., Chen W., Shannon M.E. Submitted (JAN-2002) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [MRNA] (ISOFORM 1), VARIANTS CYS-547 AND GLN-1119. |
| [4] | "The DNA sequence of human chromosome 22." Dunham I., Hunt A.R., Collins J.E., Bruskiewich R., Beare D.M., Clamp M., Smink L.J., Ainscough R., Almeida J.P., Babbage A.K., Bagguley C., Bailey J., Barlow K.F., Bates K.N., Beasley O.P., Bird C.P., Blakey S.E., Bridgeman A.M. Wright H.Nature 402:489-495(1999) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA], VARIANT TRP-661. |
| [5] | "Full-length sequencing of 100 cDNA clones from human adult skeletal muscle." Stanchi F., Lanfranchi G. Submitted (FEB-2000) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [MRNA] OF 2343-2567. Tissue: Skeletal muscle. |
| [6] | "The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)." The MGC Project Team Genome Res. 14:2121-2127(2004) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] (ISOFORM 1), VARIANTS CYS-547; GLN-1119 AND ARG-2347. |
| [7] | "The full-ORF clone resource of the German cDNA consortium." Bechtel S., Rosenfelder H., Duda A., Schmidt C.P., Ernst U., Wellenreuther R., Mehrle A., Schuster C., Bahr A., Bloecker H., Heubner D., Hoerlein A., Michel G., Wedler H., Koehrer K., Ottenwaelder B., Poustka A., Wiemann S., Schupp I. BMC Genomics 8:399-399(2007) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] OF 2359-2567. Tissue: Testis. |
| [8] | "Genetic alterations responsible for metastatic phenotypes of lung cancer cells." Yokota J., Nishioka M., Tani M., Kohno T. Clin. Exp. Metastasis 20:189-193(2003) [PubMed] [Europe PMC] [Abstract] Cited for: POSSIBLE INVOLVEMENT IN SUPPRESSION OF CELL ANCHORAGE-INDEPENDENT GROWTH. |
| [9] | "Phosphoproteome of resting human platelets." Zahedi R.P., Lewandrowski U., Wiesner J., Wortelkamp S., Moebius J., Schuetz C., Walter U., Gambaryan S., Sickmann A. J. Proteome Res. 7:526-534(2008) [PubMed] [Europe PMC] [Abstract] Cited for: IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS]. Tissue: Platelet. |
| [10] | "A quantitative atlas of mitotic phosphorylation." Dephoure N., Zhou C., Villen J., Beausoleil S.A., Bakalarski C.E., Elledge S.J., Gygi S.P. Proc. Natl. Acad. Sci. U.S.A. 105:10762-10767(2008) [PubMed] [Europe PMC] [Abstract] Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-1829, MASS SPECTROMETRY. Tissue: Cervix carcinoma. |
| [11] | "Quantitative phosphoproteomic analysis of T cell receptor signaling reveals system-wide modulation of protein-protein interactions." Mayya V., Lundgren D.H., Hwang S.-I., Rezaul K., Wu L., Eng J.K., Rodionov V., Han D.K. Sci. Signal. 2:RA46-RA46(2009) [PubMed] [Europe PMC] [Abstract] Cited for: IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS]. Tissue: Leukemic T-cell. |
| + | Additional computationally mapped references. |
Cross-references
Sequence databases | |
|---|---|
| EMBL GenBank DDBJ | AB075376 mRNA. Translation: BAC16363.1. AB042648 mRNA. Translation: BAB55550.2. AJ310931 mRNA. Translation: CAC70712.2. AJ310932 Genomic DNA. Translation: CAC70714.3. AY077700 mRNA. Translation: AAL75811.1. Z98949 Genomic DNA. No translation available. AL080245 Genomic DNA. No translation available. AL022329 Genomic DNA. No translation available. AL079300 Genomic DNA. No translation available. BC144597 mRNA. Translation: AAI44598.1. BC150626 mRNA. Translation: AAI50627.1. AJ271918 mRNA. Translation: CAC81082.1. AL833890 mRNA. Translation: CAD38746.1. |
| IPI | IPI00874168. IPI01015401. |
| RefSeq | NP_115997.5. NM_032608.5. |
| UniGene | Hs.417959. |
3D structure databases | |
| ProteinModelPortal | Q8IUG5. |
| SMR | Q8IUG5. Positions 503-1451. |
| ModBase | Search... |
Protein-protein interaction databases | |
| IntAct | Q8IUG5. 3 interactions. |
| MINT | MINT-7242569. |
| STRING | 9606.ENSP00000386096. |
PTM databases | |
| PhosphoSite | Q8IUG5. |
Polymorphism databases | |
| DMDM | 32699565. |
Proteomic databases | |
| PaxDb | Q8IUG5. |
| PRIDE | Q8IUG5. |
Protocols and materials databases | |
| StructuralBiologyKnowledgebase | Search... |
Genome annotation databases | |
| Ensembl | ENST00000540454; ENSP00000441301; ENSG00000133454. |
| GeneID | 84700. |
| KEGG | hsa:84700. |
| UCSC | uc011aka.1. human. |
Organism-specific databases | |
| CTD | 84700. |
| GeneCards | GC22P026138. |
| H-InvDB | HIX0016319. |
| HGNC | HGNC:18150. MYO18B. |
| HPA | HPA000953. |
| MIM | 607295. gene. |
| neXtProt | NX_Q8IUG5. |
| PharmGKB | PA38300. |
| GenAtlas | Search... |
Phylogenomic databases | |
| eggNOG | COG5022. |
| HOVERGEN | HBG052544. |
| KO | K10362. |
Gene expression databases | |
| ArrayExpress | Q8IUG5. |
| Bgee | Q8IUG5. |
| CleanEx | HS_MYO18B. |
| Genevestigator | Q8IUG5. |
| GermOnline | ENSG00000133454. Homo sapiens. |
Family and domain databases | |
| InterPro | IPR000048. IQ_motif_EF-hand-BS. IPR001609. Myosin_head_motor_dom. [Graphical view] |
| Pfam | PF00063. Myosin_head. 2 hits. [Graphical view] |
| PRINTS | PR00193. MYOSINHEAVY. |
| SMART | SM00015. IQ. 1 hit. SM00242. MYSc. 1 hit. [Graphical view] |
| PROSITE | PS50096. IQ. 1 hit. [Graphical view] |
| ProtoNet | Search... |
Other | |
| GenomeRNAi | 84700. |
| NextBio | 74784. |
| SOURCE | Search... |
Entry information
| Entry name | MY18B_HUMAN | ||||||||
| Accession | Primary (citable) accession number: Q8IUG5 Secondary accession number(s): B2RWP3 Q96KR9 | ||||||||
| Entry history |
| ||||||||
| Entry status | Reviewed (UniProtKB/Swiss-Prot) | ||||||||
| Annotation program | Chordata Protein Annotation Program | ||||||||
| Disclaimer | Any medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care. | ||||||||
Relevant documents
| Human chromosome 22 Human chromosome 22: entries, gene names and cross-references to MIM |
| Human entries with polymorphisms or disease mutations List of human entries with polymorphisms or disease mutations |
| Human polymorphisms and disease mutations Index of human polymorphisms and disease mutations |
| MIM cross-references Online Mendelian Inheritance in Man (MIM) cross-references in UniProtKB/Swiss-Prot |
| SIMILARITY comments Index of protein domains and families |

Clusters with
