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Protein
Submitted name:

Lysozyme

Gene
N/A
Organism
Ruditapes philippinarum (Japanese littleneck clam) (Venerupis philippinarum)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at protein leveli

Functioni

Sites

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Binding sitei84N-acetyl-D-glucosamineCombined sources1
Binding sitei92N-acetyl-D-glucosamineCombined sources1
Binding sitei119N-acetyl-D-glucosamineCombined sources1

GO - Molecular functioni

Complete GO annotation...

Protein family/group databases

CAZyiGH22. Glycoside Hydrolase Family 22.
MEROPSiS81.001.

Names & Taxonomyi

Protein namesi
Submitted name:
LysozymeImported
OrganismiRuditapes philippinarum (Japanese littleneck clam) (Venerupis philippinarum)Imported
Taxonomic identifieri129788 [NCBI]
Taxonomic lineageiEukaryotaMetazoaLophotrochozoaMolluscaBivalviaHeteroconchiaEuheterodontaVeneroidaVeneroideaVeneridaeRuditapes

PTM / Processingi

Amino acid modifications

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Disulfide bondi21 ↔ 98Combined sources
Disulfide bondi24 ↔ 130Combined sources
Disulfide bondi26 ↔ 33Combined sources
Disulfide bondi38 ↔ 47Combined sources
Disulfide bondi60 ↔ 80Combined sources
Disulfide bondi70 ↔ 76Combined sources
Disulfide bondi94 ↔ 112Combined sources

Structurei

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
PDB entryMethodResolution (Å)ChainPositionsPDBsum
2DQAX-ray1.60A/B12-134[»]
ProteinModelPortaliQ8IU26.
SMRiQ8IU26.
ModBaseiSearch...
MobiDBiSearch...

Miscellaneous databases

EvolutionaryTraceiQ8IU26.

Family & Domainsi

Region

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Regioni53 – 59N-acetyl-D-glucosamine bindingCombined sources7
Regioni105 – 107N-acetyl-D-glucosamine bindingCombined sources3

Family and domain databases

InterProiIPR008597. Destabilase.
IPR023346. Lysozyme-like_dom.
[Graphical view]
PANTHERiPTHR11195. PTHR11195. 1 hit.
PfamiPF05497. Destabilase. 1 hit.
[Graphical view]
SUPFAMiSSF53955. SSF53955. 1 hit.

Sequencei

Sequence statusi: Complete.

Q8IU26-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
METVSVEEGL DFAPGMVSQK CLLCMCKLES GGCKPIGCRM DVGSLSCGYF
60 70 80 90 100
QIKQPYWIDC GKPGKDWKSC SNDINCSSKC VQQYMKRYAT HYRCPLNCEG
110 120 130
FAREHNGGPN GCHSSRTLKY WELLQKIPGC KGVKFS
Length:136
Mass (Da):15,198
Last modified:March 1, 2003 - v1
Checksum:i78E0918E7A563876
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AB091383 mRNA. Translation: BAC15553.1.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AB091383 mRNA. Translation: BAC15553.1.

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
PDB entryMethodResolution (Å)ChainPositionsPDBsum
2DQAX-ray1.60A/B12-134[»]
ProteinModelPortaliQ8IU26.
SMRiQ8IU26.
ModBaseiSearch...
MobiDBiSearch...

Protein family/group databases

CAZyiGH22. Glycoside Hydrolase Family 22.
MEROPSiS81.001.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Miscellaneous databases

EvolutionaryTraceiQ8IU26.

Family and domain databases

InterProiIPR008597. Destabilase.
IPR023346. Lysozyme-like_dom.
[Graphical view]
PANTHERiPTHR11195. PTHR11195. 1 hit.
PfamiPF05497. Destabilase. 1 hit.
[Graphical view]
SUPFAMiSSF53955. SSF53955. 1 hit.
ProtoNetiSearch...

Entry informationi

Entry nameiQ8IU26_RUDPH
AccessioniPrimary (citable) accession number: Q8IU26
Entry historyi
Integrated into UniProtKB/TrEMBL: March 1, 2003
Last sequence update: March 1, 2003
Last modified: November 2, 2016
This is version 43 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

3D-structureCombined sources

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.