Q8IR12 (Q8IR12_DROME) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Chromosome-associated protein, isoform B EMBL AAN09411.1

Submitted name:
IP16426p EMBL ABJ17066.1

Gene names

Name:	Cap FlyBase FBgn0015615 EMBL AAN09411.1
ORF Names:	Dmel_CG9802 EMBL AAN09411.1

Organism

Drosophila melanogaster (Fruit fly)

Taxonomic identifier

7227 [NCBI]

Taxonomic lineage

Eukaryota › Metazoa › Arthropoda › Hexapoda › Insecta › Pterygota › Neoptera › Endopterygota › Diptera › Brachycera › Muscomorpha › Ephydroidea › Drosophilidae › Drosophila › Sophophora

Protein attributes

Sequence length	1054 AA.
Sequence status	Complete.
Protein existence	Evidence at transcript level

Ontologies

Keywords
Technical term	Complete proteome Reference proteome
Gene Ontology (GO)
Biological process	chromosome organization Inferred from electronic annotation. Source: InterPro
Cellular component	cohesin complex Non-traceable author statement. Source: FlyBase
Molecular function	ATP binding Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q8IR12 [UniParc]. Last modified March 1, 2003. Version 1. Checksum: F22E20C517D4AB0E	FASTA	1,054	123,221
	10 20 30 40 50 60 MATAADSYRL KLLREVAGTR VYDERKEESL NLLRETDSKV EKISEYLKTI EDRLQTLEEE 70 80 90 100 110 120 KEELKEYQKW DKTRRTLEYI RYETELKDTK KALDELQLQR KSSSDKKKIY NIEIQKAQEK 130 140 150 160 170 180 IKDVQKNLKE AKKKVQSTKE ERSVLMTEQQ QLLREKTKLD LTIVDLNDEV QGDNKSKERA 190 200 210 220 230 240 DQELKNLKVT IAEREKELDD VKPKYEAMKR KEEDCSRELQ LKEQKRKELY AKQGRGSQFS 250 260 270 280 290 300 SREDRDKWIT NELKSISKQT RDKIAHHAKL VEDLKKDATS EKDLGQKIEE HSSELEQLRL 310 320 330 340 350 360 QIDEHNKKYY ELKKTKDQHQ SMRNELWRKE TQMTQQLQTH KEELSRADQA LRSMAGKPIL 370 380 390 400 410 420 NGCDSVRKVL DSFVERGGQS AEIARAYYGP VIENFSCDKT IYTAVEVTAA NRLFHHIVES 430 440 450 460 470 480 EYEGTQILKE MNKLKLPGEV TFMPLNRLQV KIHDYPDDPD SIPMISKLKY DEQHDKALRY 490 500 510 520 530 540 IFGKTLICRN LERATELAKS TGLDCVTLDG DQVSSKGSLT GGYFNTSRSR LEMQKKRTEY 550 560 570 580 590 600 TSQIAEFEKK LSKLRNELKS TENNINSIVS EMQKTETKQG KSKDVFEKVQ GEIRLMKEEL 610 620 630 640 650 660 VRIEQYRAPK ERSLAQCKAS LESMTSTKSS LEAELKQELM STLSSQDQRE IDQLNDDIRR 670 680 690 700 710 720 LNQENKEAFT QRMQFEVRKN KLDNLLINNL FRRRDELIQA LQEISVEDRK RKLNNCKTEL 730 740 750 760 770 780 VSAEKRIKKV NSDLEEIEKR VMEAVQLQKE LQQELETHVR KEKEAEENLN KDSKQLEKWS 790 800 810 820 830 840 TKENMLNEKI DECTEKIASL GAVPLVDPSY TRMSLKNIFK ELEKANQHLK KYNHVNKKAL 850 860 870 880 890 900 DQFLSFSEQK EKLYRRKEEL DIGDQKIHML IQSLEMQKVE AIQFTFRQVA QNFTKVFKKL 910 920 930 940 950 960 VPMGAGFLIL KTKDNEGDEM EKEVENSDAF TGIGIRVSFT GVEAEMREMN QLSGGQKSLV 970 980 990 1000 1010 1020 ALALIFSIQK CDPAPFYLFD EIDQALDAMH RKAVANMIHE LSDTAQFITT TFRPELLENA 1030 1040 1050 HKFYGVRFRN KVSHIDCVTR EEAKDFVEDD STHA

References

	« Hide 'large scale' referencesShow 'large scale' references »
[1]	"The genome sequence of Drosophila melanogaster." Adams M.D., Celniker S.E., Holt R.A., Evans C.A., Gocayne J.D., Amanatides P.G., Scherer S.E., Li P.W., Hoskins R.A., Galle R.F., George R.A., Lewis S.E., Richards S., Ashburner M., Henderson S.N., Sutton G.G., Wortman J.R., Yandell M.D. , Zhang Q., Chen L.X., Brandon R.C., Rogers Y.H., Blazej R.G., Champe M., Pfeiffer B.D., Wan K.H., Doyle C., Baxter E.G., Helt G., Nelson C.R., Gabor G.L., Abril J.F., Agbayani A., An H.J., Andrews-Pfannkoch C., Baldwin D., Ballew R.M., Basu A., Baxendale J., Bayraktaroglu L., Beasley E.M., Beeson K.Y., Benos P.V., Berman B.P., Bhandari D., Bolshakov S., Borkova D., Botchan M.R., Bouck J., Brokstein P., Brottier P., Burtis K.C., Busam D.A., Butler H., Cadieu E., Center A., Chandra I., Cherry J.M., Cawley S., Dahlke C., Davenport L.B., Davies P., de Pablos B., Delcher A., Deng Z., Mays A.D., Dew I., Dietz S.M., Dodson K., Doup L.E., Downes M., Dugan-Rocha S., Dunkov B.C., Dunn P., Durbin K.J., Evangelista C.C., Ferraz C., Ferriera S., Fleischmann W., Fosler C., Gabrielian A.E., Garg N.S., Gelbart W.M., Glasser K., Glodek A., Gong F., Gorrell J.H., Gu Z., Guan P., Harris M., Harris N.L., Harvey D., Heiman T.J., Hernandez J.R., Houck J., Hostin D., Houston K.A., Howland T.J., Wei M.H., Ibegwam C., Jalali M., Kalush F., Karpen G.H., Ke Z., Kennison J.A., Ketchum K.A., Kimmel B.E., Kodira C.D., Kraft C., Kravitz S., Kulp D., Lai Z., Lasko P., Lei Y., Levitsky A.A., Li J., Li Z., Liang Y., Lin X., Liu X., Mattei B., McIntosh T.C., McLeod M.P., McPherson D., Merkulov G., Milshina N.V., Mobarry C., Morris J., Moshrefi A., Mount S.M., Moy M., Murphy B., Murphy L., Muzny D.M., Nelson D.L., Nelson D.R., Nelson K.A., Nixon K., Nusskern D.R., Pacleb J.M., Palazzolo M., Pittman G.S., Pan S., Pollard J., Puri V., Reese M.G., Reinert K., Remington K., Saunders R.D., Scheeler F., Shen H., Shue B.C., Siden-Kiamos I., Simpson M., Skupski M.P., Smith T., Spier E., Spradling A.C., Stapleton M., Strong R., Sun E., Svirskas R., Tector C., Turner R., Venter E., Wang A.H., Wang X., Wang Z.Y., Wassarman D.A., Weinstock G.M., Weissenbach J., Williams S.M., WoodageT, Worley K.C., Wu D., Yang S., Yao Q.A., Ye J., Yeh R.F., Zaveri J.S., Zhan M., Zhang G., Zhao Q., Zheng L., Zheng X.H., Zhong F.N., Zhong W., Zhou X., Zhu S., Zhu X., Smith H.O., Gibbs R.A., Myers E.W., Rubin G.M., Venter J.C. Science 287:2185-2195(2000) [PubMed: 10731132] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: Berkeley.
[2]	"Annotation of the Drosophila melanogaster euchromatic genome: a systematic review." Misra S., Crosby M.A., Mungall C.J., Matthews B.B., Campbell K.S., Hradecky P., Huang Y., Kaminker J.S., Millburn G.H., Prochnik S.E., Smith C.D., Tupy J.L., Whitfield E.J., Bayraktaroglu L., Berman B.P., Bettencourt B.R., Celniker S.E., de Grey A.D.N.J. , Drysdale R.A., Harris N.L., Richter J., Russo S., Schroeder A.J., Shu S.Q., Stapleton M., Yamada C., Ashburner M., Gelbart W.M., Rubin G.M., Lewis S.E. Genome Biol. 3:RESEARCH0083.1-RESEARCH0083.22(2002) [PubMed: 12537572] [Abstract] Cited for: NUCLEOTIDE SEQUENCE. Strain: Berkeley.
[3]	Stapleton M., Carlson J., Frise E., Kapadia B., Park S., Wan K., Yu C., Celniker S. Submitted (OCT-2006) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE.
+	Additional computationally mapped references.

Cross-references

Sequence databases
EMBL GenBank DDBJ	AE014298 Genomic DNA. Translation: AAN09411.1. BT029133 mRNA. Translation: ABJ17066.1.
RefSeq	NP_727988.1. NM_167525.1.
UniGene	Dm.19720.
3D structure databases
HSSP	HSSP built from PDB template 1E69 based on UniProtKB Q9X0R4.
ProteinModelPortal	Q8IR12.
SMR	Q8IR12. Positions 382-527, 877-1051.
ModBase	Search...
Protein-protein interaction databases
STRING	Q8IR12.
Proteomic databases
PRIDE	Q8IR12.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblMetazoa	FBtr0074291; FBpp0074066; FBgn0015615.
GeneID	32627.
KEGG	dme:Dmel_CG9802.
UCSC	CG9802-RB. d. melanogaster.
Organism-specific databases
CTD	32627.
FlyBase	FBgn0015615. Cap.
Phylogenomic databases
GeneTree	EMGT00050000000878.
InParanoid	Q8IR12.
PhylomeDB	Q8IR12.
Gene expression databases
ArrayExpress	Q8IR12.
Bgee	Q8IR12.
Family and domain databases
InterPro	IPR003395. RecF/RecN/SMC. IPR010935. SMC_hinge. [Graphical view]
KO	K06669.
Pfam	PF06470. SMC_hinge. 1 hit. PF02463. SMC_N. 1 hit. [Graphical view]
SMART	SM00968. SMC_hinge. 1 hit. [Graphical view]
SUPFAM	SSF75553. SMC_hinge. 1 hit.
ProtoNet	Search...
Other
NextBio	779537.

Entry information

Entry name

Q8IR12_DROME

Accession

Primary (citable) accession number: Q8IR12

Entry history

Integrated into UniProtKB/TrEMBL:	March 1, 2003
Last sequence update:	March 1, 2003
Last modified:	January 25, 2012
This is version 82 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)