Q8IQX8 (Q8IQX8_DROME) Unreviewed, UniProtKB/TrEMBL
Last modified
January 25, 2012.
Version 87.
History...
Names·Attributes·General annotation·Ontologies·Sequences·References·Cross-refs·Entry infoCustomize order
Names·Attributes·General annotation·Ontologies·Sequences·References·Cross-refs·Entry infoCustomize orderNames and origin
| Protein names | Submitted name: Histidyl-tRNA synthetase, isoform B EMBL AAN09471.1 EC=6.1.1.21 EMBL AAN09471.1 | ||||
| Gene names |
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| Organism | Drosophila melanogaster (Fruit fly) | ||||
| Taxonomic identifier | 7227 [NCBI] | ||||
| Taxonomic lineage | Eukaryota › Metazoa › Arthropoda › Hexapoda › Insecta › Pterygota › Neoptera › Endopterygota › Diptera › Brachycera › Muscomorpha › Ephydroidea › Drosophilidae › Drosophila › Sophophora |
Protein attributes
| Sequence length | 563 AA. |
| Sequence status | Complete. |
| Protein existence | Evidence at transcript level |
General annotation (Comments)
| Sequence similarities | Belongs to the class-II aminoacyl-tRNA synthetase family. RuleBase RU003746 |
Ontologies
| Keywords | |
|---|---|
| Molecular function | Aminoacyl-tRNA synthetase EMBL AAN09471.1 Ligase |
| Technical term | Complete proteome Reference proteome |
| Gene Ontology (GO) | |
| Biological process | histidyl-tRNA aminoacylation Inferred from electronic annotation. Source: InterPro |
| Cellular component | cytoplasm Inferred from electronic annotation. Source: InterPro |
| Molecular function | ATP binding Inferred from electronic annotation. Source: InterPro histidine-tRNA ligase activityInferred from electronic annotation. Source: EC |
| Complete GO annotation... | |
Sequences
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References
| « Hide 'large scale' references | |
| [1] | "Annotation of the Drosophila melanogaster euchromatic genome: a systematic review." Misra S., Crosby M.A., Mungall C.J., Matthews B.B., Campbell K.S., Hradecky P., Huang Y., Kaminker J.S., Millburn G.H., Prochnik S.E., Smith C.D., Tupy J.L., Whitfield E.J., Bayraktaroglu L., Berman B.P., Bettencourt B.R., Celniker S.E., de Grey A.D.N.J. Lewis S.E.Genome Biol. 3:RESEARCH0083.1-RESEARCH0083.22(2002) [PubMed: 12537572] [Abstract] Cited for: NUCLEOTIDE SEQUENCE. Strain: Berkeley. |
| [2] | "The genome sequence of Drosophila melanogaster." Adams M.D., Celniker S.E., Holt R.A., Evans C.A., Gocayne J.D., Amanatides P.G., Scherer S.E., Li P.W., Hoskins R.A., Galle R.F., George R.A., Lewis S.E., Richards S., Ashburner M., Henderson S.N., Sutton G.G., Wortman J.R., Yandell M.D. Venter J.C.Science 287:2185-2195(2000) [PubMed: 10731132] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: Berkeley. |
| + | Additional computationally mapped references. |
Cross-references
Sequence databases | |
|---|---|
| EMBL GenBank DDBJ | AE014298 Genomic DNA. Translation: AAN09471.1. |
| RefSeq | NP_573305.1. NM_133077.1. |
| UniGene | Dm.11373. |
3D structure databases | |
| HSSP | HSSP built from PDB template 1H4V based on UniProtKB P56194. |
| ProteinModelPortal | Q8IQX8. |
| SMR | Q8IQX8. Positions 3-559. |
| ModBase | Search... |
Protein-protein interaction databases | |
| STRING | Q8IQX8. |
Proteomic databases | |
| PRIDE | Q8IQX8. |
Protocols and materials databases | |
| StructuralBiologyKnowledgebase | Search... |
Genome annotation databases | |
| EnsemblMetazoa | FBtr0074594; FBpp0074366; FBgn0027087. |
| GeneID | 32841. |
| KEGG | dme:Dmel_CG6335. |
| NMPDR | fig|7227.3.peg.18509. |
| UCSC | CG6335-RB. d. melanogaster. |
Organism-specific databases | |
| CTD | 32841. |
| FlyBase | FBgn0027087. Aats-his. |
Phylogenomic databases | |
| eggNOG | inNOG07051. |
| GeneTree | EMGT00050000009114. |
| InParanoid | Q8IQX8. |
| OMA | LVSELWD. |
| OrthoDB | EOG44XGZ0. |
| PhylomeDB | Q8IQX8. |
Gene expression databases | |
| ArrayExpress | Q8IQX8. |
| Bgee | Q8IQX8. |
Family and domain databases | |
| InterPro | IPR002314. aa-tRNA-synt_IIb_cons-dom. IPR006195. aa-tRNA-synth_II. IPR004154. Anticodon-bd. IPR004516. His-tRNA_synth_IIA. IPR009068. S15_NS1_RNA-bd. IPR000738. WHEP-TRS. [Graphical view] |
| Gene3D | G3DSA:3.40.50.800. Anticodon_bd. 1 hit. G3DSA:1.10.287.10. S15_NS1_RNA_bd. 1 hit. |
| KO | K01892. |
| PANTHER | PTHR11476. His-tRNA_synth. 1 hit. |
| Pfam | PF03129. HGTP_anticodon. 1 hit. PF00587. tRNA-synt_2b. 1 hit. [Graphical view] |
| SMART | SM00991. WHEP-TRS. 1 hit. [Graphical view] |
| SUPFAM | SSF52954. Anticodon_bd. 1 hit. |
| PROSITE | PS50862. AA_TRNA_LIGASE_II. 1 hit. PS51185. WHEP_TRS_2. 1 hit. [Graphical view] |
| ProtoNet | Search... |
Other | |
| NextBio | 780657. |
Entry information
| Entry name | Q8IQX8_DROME | ||||||||
| Accession | Primary (citable) accession number: Q8IQX8 | ||||||||
| Entry history |
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| Entry status | Unreviewed (UniProtKB/TrEMBL) | ||||||||

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