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Unreviewed, UniProtKB/TrEMBL Q8IQX8 (Q8IQX8_DROME)

Last modified June 16, 2009. Version 65. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data | Customize display text xml rdf/xml gff fasta
Names and origin · Protein attributes · General annotation (Comments) · Ontologies · Sequences · References · Cross-references · Entry information

Names and origin

Protein namesSubmitted name:
    Histidyl-tRNA synthetase, isoform B EMBL AAN09471.1
    EC=6.1.1.21
Gene names
Name: Aats-his EMBL AAN09471.1
ORF Names: Dmel_CG6335 EMBL AAN09471.1
OrganismDrosophila melanogaster (Fruit fly) [Complete proteome]
Taxonomic identifier7227 [NCBI]
Taxonomic lineageEukaryotaMetazoaArthropodaHexapodaInsectaPterygotaNeopteraEndopterygotaDipteraBrachyceraMuscomorphaEphydroideaDrosophilidaeDrosophilaSophophora

Protein attributes

Sequence length563 AA.
Sequence statusComplete.
Sequence processingThe displayed sequence is not processed.
Protein existenceEvidence at transcript level.

General annotation (Comments)

Ontologies

Keywords
   Molecular functionAminoacyl-tRNA synthetase
Ligase
   Technical termComplete proteome
Gene Ontology (GO)
   Biological processhistidyl-tRNA aminoacylation

Inferred from electronic annotation. Source: InterPro

   Cellular componentcytoplasm

Inferred from electronic annotation. Source: InterPro

   Molecular functionATP binding

Inferred from electronic annotation. Source: InterPro

histidine-tRNA ligase activity

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
Q8IQX8-1 [UniParc].

Last modified March 1, 2003. Version 1.
Checksum: 5E4709C97955DCF2

FASTA56362,275
        10         20         30         40         50         60 
MSDTREQILE QIKVQGDLVR QLKAAKESKE KHLSNPHHVH VPSLKSFPAS PLQIDEEVAR 

        70         80         90        100        110        120 
LLALKATLGG DAAPTNQKFT LKTPKGTRDY GPQQMTLRQG VLDKIVQVFK RHGGEAIDTP 

       130        140        150        160        170        180 
VFELKVSSPG SHWSGMILFK TMRIEVLTGK YGEDSKLIYD LKDQGGEILS MRYDLTVPLA 

       190        200        210        220        230        240 
RYLAMNKISS IKRYHIAKVY RRDNPAMTKG RYREFYQCDF DIAGTYDPML PDAECVKIVS 

       250        260        270        280        290        300 
EILDTLDIGD YVIKLNHRQL LDGMFQACGV PADSFRTICS AVDKLDKSPW ADVRKEMVDE 

       310        320        330        340        350        360 
KGLDEAAADR IGEYVRLSGG AELVEQLLAN EKLKAVPNAV KGLEGMKQLL KYCSIFGLDK 

       370        380        390        400        410        420 
RVSFDLSLAR GLDYYTGVIY EGVLKGESAT VASPAKTSQQ NGEQANEPAT VGSVAGGGRY 

       430        440        450        460        470        480 
DNLVGMFDPR GKAVPCVGVS IGVERIFSVL EARAAASGLK LRTSDVEVYV ASAHKGLHEQ 

       490        500        510        520        530        540 
RLKVLNLLWD AGVKAEHSYK LNPKLLVQLQ HCEEHQIPLV VVLGDAELAQ GLVKLREVTT 

       550        560 
REETNVKLED LAAEIRRRQQ ASA 

« Hide

References

[1]"Annotation of the Drosophila melanogaster euchromatic genome: a systematic review."
Misra S., Crosby M.A., Mungall C.J., Matthews B.B., Campbell K.S., Hradecky P., Huang Y., Kaminker J.S., Millburn G.H., Prochnik S.E., Smith C.D., Tupy J.L., Whitfield E.J., Bayraktaroglu L., Berman B.P., Bettencourt B.R., Celniker S.E., de Grey A.D.N.J. expand/collapse author list , Drysdale R.A., Harris N.L., Richter J., Russo S., Schroeder A.J., Shu S.Q., Stapleton M., Yamada C., Ashburner M., Gelbart W.M., Rubin G.M., Lewis S.E.
Genome Biol. 3:RESEARCH0083.1-RESEARCH0083.22(2002) [PubMed: 12537572] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: Berkeley.
[2]"The genome sequence of Drosophila melanogaster."
Adams M.D., Celniker S.E., Holt R.A., Evans C.A., Gocayne J.D., Amanatides P.G., Scherer S.E., Li P.W., Hoskins R.A., Galle R.F., George R.A., Lewis S.E., Richards S., Ashburner M., Henderson S.N., Sutton G.G., Wortman J.R., Yandell M.D. expand/collapse author list , Zhang Q., Chen L.X., Brandon R.C., Rogers Y.-H.C., Blazej R.G., Champe M., Pfeiffer B.D., Wan K.H., Doyle C., Baxter E.G., Helt G., Nelson C.R., Miklos G.L.G., Abril J.F., Agbayani A., An H.-J., Andrews-Pfannkoch C., Baldwin D., Ballew R.M., Basu A., Baxendale J., Bayraktaroglu L., Beasley E.M., Beeson K.Y., Benos P.V., Berman B.P., Bhandari D., Bolshakov S., Borkova D., Botchan M.R., Bouck J., Brokstein P., Brottier P., Burtis K.C., Busam D.A., Butler H., Cadieu E., Center A., Chandra I., Cherry J.M., Cawley S., Dahlke C., Davenport L.B., Davies P., de Pablos B., Delcher A., Deng Z., Mays A.D., Dew I., Dietz S.M., Dodson K., Doup L.E., Downes M., Dugan-Rocha S., Dunkov B.C., Dunn P., Durbin K.J., Evangelista C.C., Ferraz C., Ferriera S., Fleischmann W., Fosler C., Gabrielian A.E., Garg N.S., Gelbart W.M., Glasser K., Glodek A., Gong F., Gorrell J.H., Gu Z., Guan P., Harris M., Harris N.L., Harvey D.A., Heiman T.J., Hernandez J.R., Houck J., Hostin D., Houston K.A., Howland T.J., Wei M.-H., Ibegwam C., Jalali M., Kalush F., Karpen G.H., Ke Z., Kennison J.A., Ketchum K.A., Kimmel B.E., Kodira C.D., Kraft C.L., Kravitz S., Kulp D., Lai Z., Lasko P., Lei Y., Levitsky A.A., Li J.H., Li Z., Liang Y., Lin X., Liu X., Mattei B., McIntosh T.C., McLeod M.P., McPherson D., Merkulov G., Milshina N.V., Mobarry C., Morris J., Moshrefi A., Mount S.M., Moy M., Murphy B., Murphy L., Muzny D.M., Nelson D.L., Nelson D.R., Nelson K.A., Nixon K., Nusskern D.R., Pacleb J.M., Palazzolo M., Pittman G.S., Pan S., Pollard J., Puri V., Reese M.G., Reinert K., Remington K., Saunders R.D.C., Scheeler F., Shen H., Shue B.C., Siden-Kiamos I., Simpson M., Skupski M.P., Smith T.J., Spier E., Spradling A.C., Stapleton M., Strong R., Sun E., Svirskas R., Tector C., Turner R., Venter E., Wang A.H., Wang X., Wang Z.-Y., Wassarman D.A., Weinstock G.M., Weissenbach J., Williams S.M., Woodage T., Worley K.C., Wu D., Yang S., Yao Q.A., Ye J., Yeh R.-F., Zaveri J.S., Zhan M., Zhang G., Zhao Q., Zheng L., Zheng X.H., Zhong F.N., Zhong W., Zhou X., Zhu S.C., Zhu X., Smith H.O., Gibbs R.A., Myers E.W., Rubin G.M., Venter J.C.
Science 287:2185-2195(2000) [PubMed: 10731132] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: Berkeley.

Cross-references

Sequence databases

AE014298 Genomic DNA. Translation: AAN09471.1.
RefSeqNP_573305.1.
UniGeneDm.11373

3D structure databases

HSSPHSSP built from PDB template 1H4V based on UniProtKB P56194.
ModBaseSearch...

Proteomic databases

PRIDEQ8IQX8.

Genome annotation databases

EnsemblFBgn0027087. Drosophila melanogaster. [Contig view]
GeneID32841.
KEGGdme:Dmel_CG6335.
NMPDRfig|7227.3.peg.18509.

Organism-specific databases

FlyBaseFBgn0027087. Aats-his.

Phylogenomic databases

HOGENOMQ8IQX8.
OMAQ8IQX8. LDKSPWE.

Gene expression databases

ArrayExpressQ8IQX8.

Family and domain databases

InterProIPR002314. aa-tRNA-synt_IIb_cons-reg.
IPR006195. aa-tRNA-synth_II_cons-reg.
IPR004154. Anticodon_bd.
IPR004516. His-tRNA_synth_IIA.
IPR000738. WHEP-TRS.
[Graphical view]
Gene3DG3DSA:3.40.50.800. Anticodon_bd. 1 hit.
PANTHERPTHR11476. His-tRNA_synth. 1 hit.
PfamPF03129. HGTP_anticodon. 1 hit.
PF00587. tRNA-synt_2b. 1 hit.
PF00458. WHEP-TRS. 1 hit.
[Graphical view]
PROSITEPS50862. AA_TRNA_LIGASE_II. 1 hit.
PS51185. WHEP_TRS_2. 1 hit.
[Graphical view]
ProtoNetSearch...

Other Resources

NextBio780657.

Entry information

Entry nameQ8IQX8_DROME
AccessionPrimary (citable) accession number: Q8IQX8
Entry history
Integrated into UniProtKB/TrEMBL: March 1, 2003
Last sequence update: March 1, 2003
Last modified: June 16, 2009
This is version 65 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
Names and origin · Protein attributes · General annotation (Comments) · Ontologies · Sequences · References · Cross-references · Entry information