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Q8IQU1 (Q8IQU1_DROME) Unreviewed, UniProtKB/TrEMBL

Last modified January 25, 2012. Version 74. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesSubmitted name:
LD36620p EMBL AAV36978.1
Submitted name:
Vermiform, isoform D EMBL AAN11656.1
EC=3.5.1.41 EMBL AAN11656.1
Submitted name:
Vermiform, isoform G EMBL AAF49121.2
EC=3.5.1.41 EMBL AAF49121.2
Gene names
Name:verm EMBL AAF49121.2 FlyBase FBgn0261341
Synonyms:LCBP1 FlyBase FBgn0036901
ORF Names:CG8756 FlyBase FBgn0036901 EMBL AAV36978.1, Dmel_CG8756 EMBL AAN11656.1
OrganismDrosophila melanogaster (Fruit fly)
Taxonomic identifier7227 [NCBI]
Taxonomic lineageEukaryota › Metazoa › Arthropoda › Hexapoda › Insecta › Pterygota › Neoptera › Endopterygota › Diptera › Brachycera › Muscomorpha › Ephydroidea › Drosophilidae › Drosophila › Sophophora

Protein attributes

Sequence length525 AA.
Sequence statusComplete.
Protein existenceEvidence at transcript level

Sequences

Sequence LengthMass (Da)Tools
Q8IQU1 [UniParc].

Last modified March 1, 2003. Version 1.
Checksum: 5463EDBB99A88EE3

FASTA52559,619
        10         20         30         40         50         60 
MARWWPILSV VCLCLAVAHG QDKLEGVDVE EVCADRPADE YFRLETDGDC REVYRCTKSG 

        70         80         90        100        110        120 
LKEIQCPSGL AFDVIKQTCD WKAKVTNCDE KEKPRKAKPI LKTDEPICPE GKLSCGDGEC 

       130        140        150        160        170        180 
LDKELFCNGK SDCKDESDEN ACSVDEDPNR APECDPTQCA LPDCFCSADG TRIPGGIEPQ 

       190        200        210        220        230        240 
QVPQMITITF NGAVNVDNID LYEDIFNGQR QNPNGCSIKG TFFVSHKYTN YSAVQDLHRR 

       250        260        270        280        290        300 
GHEISVFSLT HKDDPNYWTG GSYDDWLAEM AGSRLIVERF ANITDGSIIG MRAPYLRVGG 

       310        320        330        340        350        360 
NKQFEMMADQ FFVYDASITA SLGRVPIWPY TLYFRMPHKC NGNAHNCPSR SHPVWEMVMN 

       370        380        390        400        410        420 
ELDRRDDPTF DESLPGCHMV DSCSNVASGD QFARLLRHNF NRHYNSNRAP LGLHFHASWL 

       430        440        450        460        470        480 
KSKKEYRDEL IKFIEEMLGR NDVFFVTNLQ VIQWMQNPTE LNSLRDFQEW KEKCDVKGQP 

       490        500        510        520 
YCSLPNACPL TTRELPGETL RLFTCMECPN NYPWILDPTG DGFSV

« Hide

References

« Hide 'large scale' references
[1]"The genome sequence of Drosophila melanogaster."
Adams M.D., Celniker S.E., Holt R.A., Evans C.A., Gocayne J.D., Amanatides P.G., Scherer S.E., Li P.W., Hoskins R.A., Galle R.F., George R.A., Lewis S.E., Richards S., Ashburner M., Henderson S.N., Sutton G.G., Wortman J.R., Yandell M.D. expand/collapse author list , Zhang Q., Chen L.X., Brandon R.C., Rogers Y.H., Blazej R.G., Champe M., Pfeiffer B.D., Wan K.H., Doyle C., Baxter E.G., Helt G., Nelson C.R., Gabor G.L., Abril J.F., Agbayani A., An H.J., Andrews-Pfannkoch C., Baldwin D., Ballew R.M., Basu A., Baxendale J., Bayraktaroglu L., Beasley E.M., Beeson K.Y., Benos P.V., Berman B.P., Bhandari D., Bolshakov S., Borkova D., Botchan M.R., Bouck J., Brokstein P., Brottier P., Burtis K.C., Busam D.A., Butler H., Cadieu E., Center A., Chandra I., Cherry J.M., Cawley S., Dahlke C., Davenport L.B., Davies P., de Pablos B., Delcher A., Deng Z., Mays A.D., Dew I., Dietz S.M., Dodson K., Doup L.E., Downes M., Dugan-Rocha S., Dunkov B.C., Dunn P., Durbin K.J., Evangelista C.C., Ferraz C., Ferriera S., Fleischmann W., Fosler C., Gabrielian A.E., Garg N.S., Gelbart W.M., Glasser K., Glodek A., Gong F., Gorrell J.H., Gu Z., Guan P., Harris M., Harris N.L., Harvey D., Heiman T.J., Hernandez J.R., Houck J., Hostin D., Houston K.A., Howland T.J., Wei M.H., Ibegwam C., Jalali M., Kalush F., Karpen G.H., Ke Z., Kennison J.A., Ketchum K.A., Kimmel B.E., Kodira C.D., Kraft C., Kravitz S., Kulp D., Lai Z., Lasko P., Lei Y., Levitsky A.A., Li J., Li Z., Liang Y., Lin X., Liu X., Mattei B., McIntosh T.C., McLeod M.P., McPherson D., Merkulov G., Milshina N.V., Mobarry C., Morris J., Moshrefi A., Mount S.M., Moy M., Murphy B., Murphy L., Muzny D.M., Nelson D.L., Nelson D.R., Nelson K.A., Nixon K., Nusskern D.R., Pacleb J.M., Palazzolo M., Pittman G.S., Pan S., Pollard J., Puri V., Reese M.G., Reinert K., Remington K., Saunders R.D., Scheeler F., Shen H., Shue B.C., Siden-Kiamos I., Simpson M., Skupski M.P., Smith T., Spier E., Spradling A.C., Stapleton M., Strong R., Sun E., Svirskas R., Tector C., Turner R., Venter E., Wang A.H., Wang X., Wang Z.Y., Wassarman D.A., Weinstock G.M., Weissenbach J., Williams S.M., WoodageT, Worley K.C., Wu D., Yang S., Yao Q.A., Ye J., Yeh R.F., Zaveri J.S., Zhan M., Zhang G., Zhao Q., Zheng L., Zheng X.H., Zhong F.N., Zhong W., Zhou X., Zhu S., Zhu X., Smith H.O., Gibbs R.A., Myers E.W., Rubin G.M., Venter J.C.
Science 287:2185-2195(2000) [PubMed: 10731132] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: Berkeley.
[2]"Annotation of the Drosophila melanogaster euchromatic genome: a systematic review."
Misra S., Crosby M.A., Mungall C.J., Matthews B.B., Campbell K.S., Hradecky P., Huang Y., Kaminker J.S., Millburn G.H., Prochnik S.E., Smith C.D., Tupy J.L., Whitfield E.J., Bayraktaroglu L., Berman B.P., Bettencourt B.R., Celniker S.E., de Grey A.D.N.J. expand/collapse author list , Drysdale R.A., Harris N.L., Richter J., Russo S., Schroeder A.J., Shu S.Q., Stapleton M., Yamada C., Ashburner M., Gelbart W.M., Rubin G.M., Lewis S.E.
Genome Biol. 3:RESEARCH0083.1-RESEARCH0083.22(2002) [PubMed: 12537572] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
Strain: Berkeley.
[3]Stapleton M., Carlson J., Chavez C., Frise E., George R., Pacleb J., Park S., Wan K., Yu C., Rubin G.M., Celniker S.
Submitted (OCT-2004) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
Strain: Berkeley EMBL AAV36978.1.
+Additional computationally mapped references.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		AE014296 Genomic DNA. Translation: AAF49121.2.
AE014296 Genomic DNA. Translation: AAN11656.1.
BT016093 mRNA. Translation: AAV36978.1.
RefSeqNP_649142.1. NM_140885.2.
NP_730442.2. NM_168809.2.
UniGeneDm.11517.

3D structure databases

ProteinModelPortalQ8IQU1.
SMRQ8IQU1. Positions 18-173.
ModBaseSearch...

Protein-protein interaction databases

STRINGQ8IQU1.
Q9VW32.

Protein family/group databases

CAZyCBM14. Carbohydrate-Binding Module Family 14.

Proteomic databases

PRIDEQ8IQU1.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblMetazoaFBtr0074957; FBpp0074725; FBgn0261341.
FBtr0302335; FBpp0291540; FBgn0261341.
GeneID40149.
KEGGdme:Dmel_CG8756.
UCSCCG8756-RD. d. melanogaster.

Organism-specific databases

CTD40149.
FlyBaseFBgn0261341. verm.

Phylogenomic databases

eggNOGinNOG08745.
InParanoidQ8IQU1.

Gene expression databases

ArrayExpressQ8IQU1.
BgeeQ8IQU1.
Q9VW32.

Family and domain databases

InterProIPR002557. Chitin-bd_dom.
IPR011330. Glyco_hydro/deAcase_b/a-brl.
IPR023415. LDLR_class-A_CS.
IPR002172. LDrepeatLR_classA_rpt.
IPR002509. Polysac_deacetylase.
[Graphical view]
Gene3DG3DSA:2.170.140.10. Chitin-bd_dom. 1 hit.
G3DSA:4.10.400.10. LDL_rcpt_classA_cys-rich. 1 hit.
G3DSA:3.20.20.370. Polysac_deacetylase. 2 hits.
PfamPF01607. CBM_14. 1 hit.
PF00057. Ldl_recept_a. 1 hit.
[Graphical view]
SMARTSM00494. ChtBD2. 1 hit.
SM00192. LDLa. 1 hit.
[Graphical view]
SUPFAMSSF57625. Chitin_bind_PerA. 1 hit.
SSF88713. Glyco_hydro/deAcase_b/a-brl. 1 hit.
SSF57424. LDL_rcpt_classA_cys-rich. 1 hit.
PROSITEPS50940. CHIT_BIND_II. 1 hit.
PS01209. LDLRA_1. 1 hit.
PS50068. LDLRA_2. 1 hit.
[Graphical view]
ProtoNetSearch...

Other

NextBio817253.

Entry information

Entry nameQ8IQU1_DROME
AccessionPrimary (citable) accession number: Q8IQU1
Secondary accession number(s): Q9VW32
Entry history
Integrated into UniProtKB/TrEMBL: March 1, 2003
Last sequence update: March 1, 2003
Last modified: January 25, 2012
This is version 74 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
to top of pageNames·Attributes·Ontologies·Sequences·References·Cross-refs·Entry info