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Q8IFP1

- Q8IFP1_PLAF7

UniProt

Q8IFP1 - Q8IFP1_PLAF7

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Protein
Submitted name:

U5 small nuclear ribonucleoprotein-specific protein, putative

Gene
PFD1060w
Organism
Plasmodium falciparum (isolate 3D7)
Status
Unreviewed - Annotation score: 1 out of 5 - Protein predictedi

Functioni

GO - Molecular functioni

  1. ATP binding Source: UniProtKB-KW
  2. ATP-dependent RNA helicase activity Source: GeneDB_Pfalciparum
  3. nucleic acid binding Source: InterPro

GO - Biological processi

  1. ATP catabolic process Source: GOC
Complete GO annotation...

Keywords - Molecular functioni

HelicaseUniRule annotation, Hydrolase, RibonucleoproteinImported

Keywords - Ligandi

ATP-binding, Nucleotide-binding, Viral nucleoproteinImported

Names & Taxonomyi

Protein namesi
Submitted name:
U5 small nuclear ribonucleoprotein-specific protein, putativeImported
Gene namesi
ORF Names:PFD1060wImported
OrganismiPlasmodium falciparum (isolate 3D7)Imported
Taxonomic identifieri36329 [NCBI]
Taxonomic lineageiEukaryotaAlveolataApicomplexaAconoidasidaHaemosporidaPlasmodiumPlasmodium (Laverania)
ProteomesiUP000001450: Chromosome 4

Organism-specific databases

EuPathDBiPlasmoDB:PF3D7_0422500.

Subcellular locationi

GO - Cellular componenti

  1. spliceosomal complex Source: GeneDB_Pfalciparum
  2. viral nucleocapsid Source: UniProtKB-KW
Complete GO annotation...

Keywords - Cellular componenti

Virion

PTM / Processingi

Proteomic databases

PRIDEiQ8IFP1.

Interactioni

Protein-protein interaction databases

IntActiQ8IFP1. 3 interactions.
MINTiMINT-1569750.
STRINGi5833.PFD1060w-1.

Structurei

3D structure databases

ProteinModelPortaliQ8IFP1.

Family & Domainsi

Phylogenomic databases

HOGENOMiHOG000157749.
KOiK01509.
OMAiCEATINL.
PhylomeDBiQ8IFP1.

Family and domain databases

Gene3Di2.60.40.150. 1 hit.
3.40.50.300. 8 hits.
InterProiIPR003593. AAA+_ATPase.
IPR000008. C2_dom.
IPR011545. DNA/RNA_helicase_DEAD/DEAH_N.
IPR014001. Helicase_ATP-bd.
IPR001650. Helicase_C.
IPR014756. Ig_E-set.
IPR027417. P-loop_NTPase.
IPR004179. Sec63-dom.
[Graphical view]
PfamiPF00270. DEAD. 2 hits.
PF00271. Helicase_C. 1 hit.
PF02889. Sec63. 2 hits.
[Graphical view]
SMARTiSM00382. AAA. 1 hit.
SM00487. DEXDc. 1 hit.
SM00490. HELICc. 1 hit.
SM00611. SEC63. 2 hits.
SM00973. Sec63. 2 hits.
[Graphical view]
SUPFAMiSSF52540. SSF52540. 7 hits.
SSF81296. SSF81296. 3 hits.
PROSITEiPS51192. HELICASE_ATP_BIND_1. 1 hit.
PS51194. HELICASE_CTER. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q8IFP1-1 [UniParc]FASTAAdd to Basket

« Hide

MAEEYEKFKR FEYRMNSNLV LQREGPISNT KEPTGESESL VGRLKYKMGD     50
KVEYSNKNKK NIMLVQDNKE MAINRNKRKD IFDDDKYNRR SNKKIRHKEK 100
SVLNVNIEDI FLYKPTTKYT EEIYTKLMSK IRFLLGDNTG DIINSACNEI 150
LYILKNEELN NEEKKKQVES ELEIYINDDI FIEINNLSKE IYDFNKQEEG 200
EYVENDEGVA VIFEEDDDYF NIGRNITRGY INDHETMELQ ELSDDNEEED 250
ISEDDDGDDE EEDDEEADAE EADDEDGDDE DGDDEEGDDE YGENEDGDDN 300
NNNNNNNNNS VRRKKKKKGN QINHLKSYDK KNKKFENYLS LKNTNKNLYY 350
DEENKNVQDN DELNINVIDS HWLQRELNKI FPDPSLCLDK EKEVLNVLNI 400
YDIQESENKL MHILKYENFH IARVLIKNRW KIYYCTLLGQ AQTEEEKEEI 450
KKEMKKTEEG QDILDELCNF KNVRKNKQSE FSKIIRKEAD NLFGKKKIND 500
YNKKGNMSDY TYIHDDDDND DNNDDNNDDN NDDDNNDDDD EEKEEGPKYY 550
DEENVSDDDN YYESTKLYNS DSQGEDANKK ININAKDVKN IKGVKEEDND 600
GGSGKEDNEP TQKSFYNNMK YKFIDLEKLE TKEKNKDIFF NKEVILPPES 650
KRIERKEYDE IIISSMKDNK MDGMKRTKNN KMNYYTSPEE IKLIHINELP 700
EWTHEVFSCV NITKLNPIQS KVYDVAFNKY EENMLICAPT GSGKTNIALL 750
CILNVINSYR LTSGNINRKD FKIVYISPMK ALVNEQVQSF NLRLKCMNIK 800
VSELTGDVNL STKELDDSQI IVMTPEKFDV ISRKWNEKIL LHKIKLIIFD 850
EIHLLNEMRG NVLESIIARI NRYMDNTMVY DMGDVADGSS GGIRGKNKDA 900
NRYNNNDDKK NDDNNNDDKK NDDNNNDDKK NDDNNNDDDD NYNGGGVNSV 950
RQNKYGENHI SIRRKKIRLV GLSATLPNYE DVGIFLRAHI ERGIFYFDHS 1000
FRPVQIEQHY IGIKEKKGIK KYALMNELTY EKVLEEAGKN QILIFVHSRK 1050
ETYRTSKLLI DRFMKSDNLS KFLIDKKISS EILLSEKEHV INEELKEILP 1100
FGFGIHHAGL KRLDRKLVED LFSDRHIQVL VCTSTLAWGI NLPAHTVIIK 1150
GTSVYNINIG DFDELSSMDV LQMVGRSGRP QYDKSGKAII ITDHKNLQLY 1200
LSLNNEQLFI ESTLLHNIVN IINAEIVLKN IQNMDDAMNW LEHTYMYIRM 1250
LKCPSLYGVI INSNDKIKGI EEFKDIIDMN NKTKKHNNNN NNNINGGNNN 1300
NNNNINGGNN NNNNNINGGN NNNSNNVMDY MSILKTNYKY NKFMEKIKRR 1350
MYNILYSCFL ILEKYDLIKY NKKLNTVSST YIGKISSYYY VDYKSIDIYN 1400
KKLNKYTNEI DLLKIFTMSN EFKNIFIRDE EKTELSIIME KLPIPVKESI 1450
NIPYTKINIL LQLYLSNIIL NGYIINADMV YIHQNALRIF RSFFEISLKK 1500
NSYNLIKLTL KFCKMIERRM WSTMTPLRQF GLLSTELIRI IEKKNITFKN 1550
YLTMNLNEYI TIFKNKKIAK NIYKLVHHFP KLELNAYIQP INHKILKVDL 1600
NIAPDFIYNP KYHGYFMLFW VFVFDISNES ILHYDLFTLK KNYKNDILNQ 1650
TQRYNNNGNN SNMYNPSDVL DDHVLTFFLP INDNPFYIVK VISDKWLECE 1700
ATINLYLKDL ILPSQNFYST QLLDLQPLPI HSIKYDKAHT FFNNIRNLHY 1750
FNSIHTQIFS SIFENNGNVL IASSNSKHYL IPAELGMIKI LKFLHCFYNF 1800
INTYIKKEKD VYKIINDKKL ADLLYNNNLI DLIKIVYIAP LDDVIIKTFK 1850
NWQAMKKTFD LKMCILTGDI QIDMKLLQTH HIILSNPSNY DNISKKWRRK 1900
KILQTVSFYI FDHMELLDTV QGGIMEILIS RIRYISTQLN INKSEKKNQH 1950
NNDNNNNDNL IMSILNIDMI KMDNVEDDNN KKNIIHNNNN NNSNSKKDDF 2000
VQTINALQNF TIDNIYDYIG LNRILCLSSC SLYNSKDFAE WIGCKKNDYY 2050
NFLSTVRDIP IEIYLHAVNI MNKQNRYISM QRQVYQNIRK LKNIPKKKKM 2100
QNVIIFVTDQ KLCKTLALDL ILSAYNDNFK YFSLFENYED DKYDTSKSST 2150
NPYDPKNEEK EKKKGGGWIS NLFTYNKDDK IGRHNESNDL INNNSHDDTT 2200
SNNLQKSGTF RSNDLYNNGT NVEELAKSIH NMINLNISNM DIIKNKEVAE 2250
NNMNVASSNN NNNNNSNSNN IYKNGRKRSN NRNNKNEEHV FDYINDKMLR 2300
QFMKKGICYL HNNMTEIEKK IVEILFDKKT IQILIVSYDY IYSLNVYANN 2350
VIILDTIITH FHNNKEEDYS IQNILEMISY AGRQNEDTKA FVYIYTYITK 2400
KEYYKNFIYE PLTVESNIED NLPNFLNNEI VMSTIENYQD AIDWLTWSFF 2450
YRRIKKNPNY YGLKGISNEH ISDYLSELIE NNMEILSFAN CINIEEQTMD 2500
IKPCNLGIIS SFYNLDYHII HFFNQYVLSL KTLKKSRIFE IICLSNIFND 2550
ILKIHNYDIF LCLKIAQACN NVQVTYEFLK LSINNENTLK NANIEDNLNK 2600
DTKSEDYKKD QYINLLQFMS VPMYFTSHLK AFILLQAHIH RYSLPLNYIQ 2650
ETKTVLLKAY KLINSLIDVI SSNNILNFCL FVMEVSQMLT QSMKSTDQSN 2700
LYQLPHFDEH LIKKANDLEI LDVYDLINAE DEPRDILLKH LNEKQRSEIA 2750
NVCNIFPIIE VQYEIDLDKS YKVNEIAQLN LTIERDLTDD AVIFAHSLYL 2800
PFEKEEMWWI VIGIKKMNLL LSIKKLSLLK SVNNIKINFE LPDKPNTYDV 2850
VIYVINDCYV GCDQEYEFKI NVEE 2874
Length:2,874
Mass (Da):337,908
Last modified:March 1, 2003 - v1
Checksum:iEE6EDC4E7E4A6E9B
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AL844503 Genomic DNA. Translation: CAD49259.1.
RefSeqiXP_001351528.1. XM_001351492.1.

Genome annotation databases

EnsemblProtistsiPFD1060w:mRNA; PFD1060w:pep; PFD1060w.
GeneIDi812456.
KEGGipfa:PFD1060w.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AL844503 Genomic DNA. Translation: CAD49259.1 .
RefSeqi XP_001351528.1. XM_001351492.1.

3D structure databases

ProteinModelPortali Q8IFP1.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

IntActi Q8IFP1. 3 interactions.
MINTi MINT-1569750.
STRINGi 5833.PFD1060w-1.

Proteomic databases

PRIDEi Q8IFP1.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblProtistsi PFD1060w:mRNA ; PFD1060w:pep ; PFD1060w .
GeneIDi 812456.
KEGGi pfa:PFD1060w.

Organism-specific databases

EuPathDBi PlasmoDB:PF3D7_0422500.

Phylogenomic databases

HOGENOMi HOG000157749.
KOi K01509.
OMAi CEATINL.
PhylomeDBi Q8IFP1.

Family and domain databases

Gene3Di 2.60.40.150. 1 hit.
3.40.50.300. 8 hits.
InterProi IPR003593. AAA+_ATPase.
IPR000008. C2_dom.
IPR011545. DNA/RNA_helicase_DEAD/DEAH_N.
IPR014001. Helicase_ATP-bd.
IPR001650. Helicase_C.
IPR014756. Ig_E-set.
IPR027417. P-loop_NTPase.
IPR004179. Sec63-dom.
[Graphical view ]
Pfami PF00270. DEAD. 2 hits.
PF00271. Helicase_C. 1 hit.
PF02889. Sec63. 2 hits.
[Graphical view ]
SMARTi SM00382. AAA. 1 hit.
SM00487. DEXDc. 1 hit.
SM00490. HELICc. 1 hit.
SM00611. SEC63. 2 hits.
SM00973. Sec63. 2 hits.
[Graphical view ]
SUPFAMi SSF52540. SSF52540. 7 hits.
SSF81296. SSF81296. 3 hits.
PROSITEi PS51192. HELICASE_ATP_BIND_1. 1 hit.
PS51194. HELICASE_CTER. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: Isolate 3D7.
  2. "Sequence of Plasmodium falciparum chromosomes 1, 3-9 and 13."
    Hall N., Pain A., Berriman M., Churcher C.M., Harris B., Harris D., Mungall K.L., Bowman S., Atkin R., Baker S., Barron A., Brooks K., Buckee C.O., Burrows C., Cherevach I., Chillingworth C., Chillingworth T., Christodoulou Z.
    , Clark L., Clark R., Corton C., Cronin A., Davies R.M., Davis P., Dear P., Dearden F., Doggett J., Feltwell T., Goble A., Goodhead I., Gwilliam R., Hamlin N., Hance Z., Harper D., Hauser H., Hornsby T., Holroyd S., Horrocks P., Humphray S., Jagels K., James K.D., Johnson D., Kerhornou A., Knights A., Konfortov B., Kyes S., Larke N., Lawson D., Lennard N., Line A., Maddison M., Mclean J., Mooney P., Moule S., Murphy L., Oliver K., Ormond D., Price C., Quail M.A., Rabbinowitsch E., Rajandream M.A., Rutter S., Rutherford K.M., Sanders M., Simmonds M., Seeger K., Sharp S., Smith R., Squares R., Squares S., Stevens K., Taylor K., Tivey A., Unwin L., Whitehead S., Woodward J.R., Sulston J.E., Craig A., Newbold C., Barrell B.G.
    Nature 419:527-531(2002) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: Isolate 3D7.

Entry informationi

Entry nameiQ8IFP1_PLAF7
AccessioniPrimary (citable) accession number: Q8IFP1
Entry historyi
Integrated into UniProtKB/TrEMBL: March 1, 2003
Last sequence update: March 1, 2003
Last modified: July 9, 2014
This is version 81 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

External Data

Dasty 3

Similar proteinsi