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Q8IFP1

- Q8IFP1_PLAF7

UniProt

Q8IFP1 - Q8IFP1_PLAF7

Protein
Submitted name:

U5 small nuclear ribonucleoprotein-specific protein, putative

Gene

PFD1060w

Organism
Plasmodium falciparum (isolate 3D7)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi
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    • History
      Entry version 82 (01 Oct 2014)
      Sequence version 1 (01 Mar 2003)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. ATP binding Source: UniProtKB-KW
    2. ATP-dependent RNA helicase activity Source: GeneDB_Pfalciparum
    3. nucleic acid binding Source: InterPro

    GO - Biological processi

    1. ATP catabolic process Source: GOC
    2. RNA splicing, via transesterification reactions Source: GeneDB_Pfalciparum

    Keywords - Molecular functioni

    HelicaseUniRule annotation, Hydrolase, RibonucleoproteinImported

    Keywords - Ligandi

    ATP-binding, Nucleotide-binding, Viral nucleoproteinImported

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    U5 small nuclear ribonucleoprotein-specific protein, putativeImported
    Gene namesi
    ORF Names:PFD1060wImported
    OrganismiPlasmodium falciparum (isolate 3D7)Imported
    Taxonomic identifieri36329 [NCBI]
    Taxonomic lineageiEukaryotaAlveolataApicomplexaAconoidasidaHaemosporidaPlasmodiumPlasmodium (Laverania)
    ProteomesiUP000001450: Chromosome 4

    Organism-specific databases

    EuPathDBiPlasmoDB:PF3D7_0422500.

    Subcellular locationi

    GO - Cellular componenti

    1. spliceosomal complex Source: GeneDB_Pfalciparum
    2. viral nucleocapsid Source: UniProtKB-KW

    Keywords - Cellular componenti

    Virion

    PTM / Processingi

    Proteomic databases

    PRIDEiQ8IFP1.

    Interactioni

    Protein-protein interaction databases

    IntActiQ8IFP1. 3 interactions.
    MINTiMINT-1569750.
    STRINGi5833.PFD1060w-1.

    Structurei

    3D structure databases

    ProteinModelPortaliQ8IFP1.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Phylogenomic databases

    HOGENOMiHOG000157749.
    KOiK01509.
    OMAiCEATINL.
    PhylomeDBiQ8IFP1.

    Family and domain databases

    Gene3Di2.60.40.150. 1 hit.
    3.40.50.300. 8 hits.
    InterProiIPR003593. AAA+_ATPase.
    IPR000008. C2_dom.
    IPR011545. DNA/RNA_helicase_DEAD/DEAH_N.
    IPR014001. Helicase_ATP-bd.
    IPR001650. Helicase_C.
    IPR014756. Ig_E-set.
    IPR027417. P-loop_NTPase.
    IPR004179. Sec63-dom.
    [Graphical view]
    PfamiPF00270. DEAD. 2 hits.
    PF00271. Helicase_C. 1 hit.
    PF02889. Sec63. 2 hits.
    [Graphical view]
    SMARTiSM00382. AAA. 1 hit.
    SM00487. DEXDc. 1 hit.
    SM00490. HELICc. 1 hit.
    SM00611. SEC63. 2 hits.
    SM00973. Sec63. 2 hits.
    [Graphical view]
    SUPFAMiSSF52540. SSF52540. 7 hits.
    SSF81296. SSF81296. 3 hits.
    PROSITEiPS51192. HELICASE_ATP_BIND_1. 1 hit.
    PS51194. HELICASE_CTER. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    Q8IFP1-1 [UniParc]FASTAAdd to Basket

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    MAEEYEKFKR FEYRMNSNLV LQREGPISNT KEPTGESESL VGRLKYKMGD     50
    KVEYSNKNKK NIMLVQDNKE MAINRNKRKD IFDDDKYNRR SNKKIRHKEK 100
    SVLNVNIEDI FLYKPTTKYT EEIYTKLMSK IRFLLGDNTG DIINSACNEI 150
    LYILKNEELN NEEKKKQVES ELEIYINDDI FIEINNLSKE IYDFNKQEEG 200
    EYVENDEGVA VIFEEDDDYF NIGRNITRGY INDHETMELQ ELSDDNEEED 250
    ISEDDDGDDE EEDDEEADAE EADDEDGDDE DGDDEEGDDE YGENEDGDDN 300
    NNNNNNNNNS VRRKKKKKGN QINHLKSYDK KNKKFENYLS LKNTNKNLYY 350
    DEENKNVQDN DELNINVIDS HWLQRELNKI FPDPSLCLDK EKEVLNVLNI 400
    YDIQESENKL MHILKYENFH IARVLIKNRW KIYYCTLLGQ AQTEEEKEEI 450
    KKEMKKTEEG QDILDELCNF KNVRKNKQSE FSKIIRKEAD NLFGKKKIND 500
    YNKKGNMSDY TYIHDDDDND DNNDDNNDDN NDDDNNDDDD EEKEEGPKYY 550
    DEENVSDDDN YYESTKLYNS DSQGEDANKK ININAKDVKN IKGVKEEDND 600
    GGSGKEDNEP TQKSFYNNMK YKFIDLEKLE TKEKNKDIFF NKEVILPPES 650
    KRIERKEYDE IIISSMKDNK MDGMKRTKNN KMNYYTSPEE IKLIHINELP 700
    EWTHEVFSCV NITKLNPIQS KVYDVAFNKY EENMLICAPT GSGKTNIALL 750
    CILNVINSYR LTSGNINRKD FKIVYISPMK ALVNEQVQSF NLRLKCMNIK 800
    VSELTGDVNL STKELDDSQI IVMTPEKFDV ISRKWNEKIL LHKIKLIIFD 850
    EIHLLNEMRG NVLESIIARI NRYMDNTMVY DMGDVADGSS GGIRGKNKDA 900
    NRYNNNDDKK NDDNNNDDKK NDDNNNDDKK NDDNNNDDDD NYNGGGVNSV 950
    RQNKYGENHI SIRRKKIRLV GLSATLPNYE DVGIFLRAHI ERGIFYFDHS 1000
    FRPVQIEQHY IGIKEKKGIK KYALMNELTY EKVLEEAGKN QILIFVHSRK 1050
    ETYRTSKLLI DRFMKSDNLS KFLIDKKISS EILLSEKEHV INEELKEILP 1100
    FGFGIHHAGL KRLDRKLVED LFSDRHIQVL VCTSTLAWGI NLPAHTVIIK 1150
    GTSVYNINIG DFDELSSMDV LQMVGRSGRP QYDKSGKAII ITDHKNLQLY 1200
    LSLNNEQLFI ESTLLHNIVN IINAEIVLKN IQNMDDAMNW LEHTYMYIRM 1250
    LKCPSLYGVI INSNDKIKGI EEFKDIIDMN NKTKKHNNNN NNNINGGNNN 1300
    NNNNINGGNN NNNNNINGGN NNNSNNVMDY MSILKTNYKY NKFMEKIKRR 1350
    MYNILYSCFL ILEKYDLIKY NKKLNTVSST YIGKISSYYY VDYKSIDIYN 1400
    KKLNKYTNEI DLLKIFTMSN EFKNIFIRDE EKTELSIIME KLPIPVKESI 1450
    NIPYTKINIL LQLYLSNIIL NGYIINADMV YIHQNALRIF RSFFEISLKK 1500
    NSYNLIKLTL KFCKMIERRM WSTMTPLRQF GLLSTELIRI IEKKNITFKN 1550
    YLTMNLNEYI TIFKNKKIAK NIYKLVHHFP KLELNAYIQP INHKILKVDL 1600
    NIAPDFIYNP KYHGYFMLFW VFVFDISNES ILHYDLFTLK KNYKNDILNQ 1650
    TQRYNNNGNN SNMYNPSDVL DDHVLTFFLP INDNPFYIVK VISDKWLECE 1700
    ATINLYLKDL ILPSQNFYST QLLDLQPLPI HSIKYDKAHT FFNNIRNLHY 1750
    FNSIHTQIFS SIFENNGNVL IASSNSKHYL IPAELGMIKI LKFLHCFYNF 1800
    INTYIKKEKD VYKIINDKKL ADLLYNNNLI DLIKIVYIAP LDDVIIKTFK 1850
    NWQAMKKTFD LKMCILTGDI QIDMKLLQTH HIILSNPSNY DNISKKWRRK 1900
    KILQTVSFYI FDHMELLDTV QGGIMEILIS RIRYISTQLN INKSEKKNQH 1950
    NNDNNNNDNL IMSILNIDMI KMDNVEDDNN KKNIIHNNNN NNSNSKKDDF 2000
    VQTINALQNF TIDNIYDYIG LNRILCLSSC SLYNSKDFAE WIGCKKNDYY 2050
    NFLSTVRDIP IEIYLHAVNI MNKQNRYISM QRQVYQNIRK LKNIPKKKKM 2100
    QNVIIFVTDQ KLCKTLALDL ILSAYNDNFK YFSLFENYED DKYDTSKSST 2150
    NPYDPKNEEK EKKKGGGWIS NLFTYNKDDK IGRHNESNDL INNNSHDDTT 2200
    SNNLQKSGTF RSNDLYNNGT NVEELAKSIH NMINLNISNM DIIKNKEVAE 2250
    NNMNVASSNN NNNNNSNSNN IYKNGRKRSN NRNNKNEEHV FDYINDKMLR 2300
    QFMKKGICYL HNNMTEIEKK IVEILFDKKT IQILIVSYDY IYSLNVYANN 2350
    VIILDTIITH FHNNKEEDYS IQNILEMISY AGRQNEDTKA FVYIYTYITK 2400
    KEYYKNFIYE PLTVESNIED NLPNFLNNEI VMSTIENYQD AIDWLTWSFF 2450
    YRRIKKNPNY YGLKGISNEH ISDYLSELIE NNMEILSFAN CINIEEQTMD 2500
    IKPCNLGIIS SFYNLDYHII HFFNQYVLSL KTLKKSRIFE IICLSNIFND 2550
    ILKIHNYDIF LCLKIAQACN NVQVTYEFLK LSINNENTLK NANIEDNLNK 2600
    DTKSEDYKKD QYINLLQFMS VPMYFTSHLK AFILLQAHIH RYSLPLNYIQ 2650
    ETKTVLLKAY KLINSLIDVI SSNNILNFCL FVMEVSQMLT QSMKSTDQSN 2700
    LYQLPHFDEH LIKKANDLEI LDVYDLINAE DEPRDILLKH LNEKQRSEIA 2750
    NVCNIFPIIE VQYEIDLDKS YKVNEIAQLN LTIERDLTDD AVIFAHSLYL 2800
    PFEKEEMWWI VIGIKKMNLL LSIKKLSLLK SVNNIKINFE LPDKPNTYDV 2850
    VIYVINDCYV GCDQEYEFKI NVEE 2874
    Length:2,874
    Mass (Da):337,908
    Last modified:March 1, 2003 - v1
    Checksum:iEE6EDC4E7E4A6E9B
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AL844503 Genomic DNA. Translation: CAD49259.1.
    RefSeqiXP_001351528.1. XM_001351492.1.

    Genome annotation databases

    EnsemblProtistsiPFD1060w:mRNA; PFD1060w:pep; PFD1060w.
    GeneIDi812456.
    KEGGipfa:PFD1060w.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AL844503 Genomic DNA. Translation: CAD49259.1 .
    RefSeqi XP_001351528.1. XM_001351492.1.

    3D structure databases

    ProteinModelPortali Q8IFP1.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    IntActi Q8IFP1. 3 interactions.
    MINTi MINT-1569750.
    STRINGi 5833.PFD1060w-1.

    Proteomic databases

    PRIDEi Q8IFP1.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblProtistsi PFD1060w:mRNA ; PFD1060w:pep ; PFD1060w .
    GeneIDi 812456.
    KEGGi pfa:PFD1060w.

    Organism-specific databases

    EuPathDBi PlasmoDB:PF3D7_0422500.

    Phylogenomic databases

    HOGENOMi HOG000157749.
    KOi K01509.
    OMAi CEATINL.
    PhylomeDBi Q8IFP1.

    Family and domain databases

    Gene3Di 2.60.40.150. 1 hit.
    3.40.50.300. 8 hits.
    InterProi IPR003593. AAA+_ATPase.
    IPR000008. C2_dom.
    IPR011545. DNA/RNA_helicase_DEAD/DEAH_N.
    IPR014001. Helicase_ATP-bd.
    IPR001650. Helicase_C.
    IPR014756. Ig_E-set.
    IPR027417. P-loop_NTPase.
    IPR004179. Sec63-dom.
    [Graphical view ]
    Pfami PF00270. DEAD. 2 hits.
    PF00271. Helicase_C. 1 hit.
    PF02889. Sec63. 2 hits.
    [Graphical view ]
    SMARTi SM00382. AAA. 1 hit.
    SM00487. DEXDc. 1 hit.
    SM00490. HELICc. 1 hit.
    SM00611. SEC63. 2 hits.
    SM00973. Sec63. 2 hits.
    [Graphical view ]
    SUPFAMi SSF52540. SSF52540. 7 hits.
    SSF81296. SSF81296. 3 hits.
    PROSITEi PS51192. HELICASE_ATP_BIND_1. 1 hit.
    PS51194. HELICASE_CTER. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: Isolate 3D7Imported.
    2. "Sequence of Plasmodium falciparum chromosomes 1, 3-9 and 13."
      Hall N., Pain A., Berriman M., Churcher C.M., Harris B., Harris D., Mungall K.L., Bowman S., Atkin R., Baker S., Barron A., Brooks K., Buckee C.O., Burrows C., Cherevach I., Chillingworth C., Chillingworth T., Christodoulou Z.
      , Clark L., Clark R., Corton C., Cronin A., Davies R.M., Davis P., Dear P., Dearden F., Doggett J., Feltwell T., Goble A., Goodhead I., Gwilliam R., Hamlin N., Hance Z., Harper D., Hauser H., Hornsby T., Holroyd S., Horrocks P., Humphray S., Jagels K., James K.D., Johnson D., Kerhornou A., Knights A., Konfortov B., Kyes S., Larke N., Lawson D., Lennard N., Line A., Maddison M., Mclean J., Mooney P., Moule S., Murphy L., Oliver K., Ormond D., Price C., Quail M.A., Rabbinowitsch E., Rajandream M.A., Rutter S., Rutherford K.M., Sanders M., Simmonds M., Seeger K., Sharp S., Smith R., Squares R., Squares S., Stevens K., Taylor K., Tivey A., Unwin L., Whitehead S., Woodward J.R., Sulston J.E., Craig A., Newbold C., Barrell B.G.
      Nature 419:527-531(2002) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: Isolate 3D7Imported.

    Entry informationi

    Entry nameiQ8IFP1_PLAF7
    AccessioniPrimary (citable) accession number: Q8IFP1
    Entry historyi
    Integrated into UniProtKB/TrEMBL: March 1, 2003
    Last sequence update: March 1, 2003
    Last modified: October 1, 2014
    This is version 82 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3