Q8IDT4 (Q8IDT4_PLAF7) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Exoribonuclease PH, putative EMBL CAD52535.1

Gene names

ORF Names:

MAL13P1.204 EMBL CAD52535.1

Organism

Plasmodium falciparum (isolate 3D7) [Reference proteome] EMBL CAD52535.1

Taxonomic identifier

36329 [NCBI]

Taxonomic lineage

cellular organisms › Eukaryota › Alveolata › Apicomplexa › Aconoidasida › Haemosporida › Plasmodium › Plasmodium (Laverania) › Plasmodium falciparum

Protein attributes

Sequence length	278 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Technical term	Complete proteome Reference proteome
Gene Ontology (GO)
Biological_process	tRNA processing Inferred from sequence or structural similarity Ref.2. Source: GeneDB_Pfalciparum
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q8IDT4 [UniParc]. Last modified March 1, 2003. Version 1. Checksum: 09E2F43B9686F694	FASTA	278	31,245
	10 20 30 40 50 60 MSSLNYIEDS INCNIRIDGR TLLTYRSIEI NKNILVSGDG SSSVINEENN VICGIKLSLI 70 80 90 100 110 120 TPDVDTYDEG NVNLQIDCPA SVAANRIKKD HLQTMTTIIY NLCIKNNINK KILCILPGKF 130 140 150 160 170 180 AWSVDINVMV LNAGGGLLDI ISIAIYVALK DTFFPIVKPK KEIEEENTFH EISNKDYQLE 190 200 210 220 230 240 IVENEHVNFP YENIPICISI GEINNKYIYD MSKVEEELVQ NIFVVAITSK GKCVAFHKLY 250 260 270 GISMEISSIL NITENSSKIS HTLFDKIHQA LDKIHANM

References

[1]

"Genome sequence of the human malaria parasite Plasmodium falciparum." Gardner M.J., Hall N., Fung E., White O., Berriman M., Hyman R.W., Carlton J.M., Pain A., Nelson K.E., Bowman S., Paulsen I.T., James K.D., Eisen J.A., Rutherford K.M., Salzberg S.L., Craig A., Kyes S., Chan M.-S. , Nene V., Shallom S.J., Suh B., Peterson J., Angiuoli S., Pertea M., Allen J., Selengut J., Haft D., Mather M.W., Vaidya A.B., Martin D.M.A., Fairlamb A.H., Fraunholz M.J., Roos D.S., Ralph S.A., McFadden G.I., Cummings L.M., Subramanian G.M., Mungall C., Venter J.C., Carucci D.J., Hoffman S.L., Newbold C., Davis R.W., Fraser C.M., Barrell B.G. Nature 419:498-511(2002) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: Isolate 3D7.

[2]

"Sequence of Plasmodium falciparum chromosomes 1, 3-9 and 13." Hall N., Pain A., Berriman M., Churcher C.M., Harris B., Harris D., Mungall K.L., Bowman S., Atkin R., Baker S., Barron A., Brooks K., Buckee C.O., Burrows C., Cherevach I., Chillingworth C., Chillingworth T., Christodoulou Z. , Clark L., Clark R., Corton C., Cronin A., Davies R.M., Davis P., Dear P., Dearden F., Doggett J., Feltwell T., Goble A., Goodhead I., Gwilliam R., Hamlin N., Hance Z., Harper D., Hauser H., Hornsby T., Holroyd S., Horrocks P., Humphray S., Jagels K., James K.D., Johnson D., Kerhornou A., Knights A., Konfortov B., Kyes S., Larke N., Lawson D., Lennard N., Line A., Maddison M., Mclean J., Mooney P., Moule S., Murphy L., Oliver K., Ormond D., Price C., Quail M.A., Rabbinowitsch E., Rajandream M.A., Rutter S., Rutherford K.M., Sanders M., Simmonds M., Seeger K., Sharp S., Smith R., Squares R., Squares S., Stevens K., Taylor K., Tivey A., Unwin L., Whitehead S., Woodward J.R., Sulston J.E., Craig A., Newbold C., Barrell B.G. Nature 419:527-531(2002) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: Isolate 3D7.

Cross-references

Sequence databases
EMBL GenBank DDBJ	AL844509 Genomic DNA. Translation: CAD52535.1.
RefSeq	XP_001350126.1. XM_001350090.1.
3D structure databases
ProteinModelPortal	Q8IDT4.
ModBase	Search...
Protein-protein interaction databases
STRING	5833.MAL13P1.204-1.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblProtists	MAL13P1.204:mRNA; MAL13P1.204:pep; MAL13P1.204.
GeneID	813762.
KEGG	pfa:MAL13P1.204.
Organism-specific databases
EuPathDB	PlasmoDB:PF3D7_1340100.
Phylogenomic databases
HOGENOM	HOG000283313.
KO	K12589.
OMA	DELEYAR.
ProtClustDB	CLSZ2433350.
Family and domain databases
InterPro	IPR001247. ExoRNase_PH_dom1. IPR015847. ExoRNase_PH_dom2. IPR020568. Ribosomal_S5_D2-typ_fold. [Graphical view]
Pfam	PF01138. RNase_PH. 1 hit. PF03725. RNase_PH_C. 1 hit. [Graphical view]
SUPFAM	SSF55666. 3_ExoRNase. 1 hit. SSF54211. Ribosomal_S5_D2-typ_fold. 1 hit.
ProtoNet	Search...

Entry information

Entry name

Q8IDT4_PLAF7

Accession

Primary (citable) accession number: Q8IDT4

Entry history

Integrated into UniProtKB/TrEMBL:	March 1, 2003
Last sequence update:	March 1, 2003
Last modified:	April 3, 2013
This is version 51 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)