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Protein
Submitted name:

DNA-directed RNA polymerases I, II, and III subunit RPABC1, putative

Gene

PF3D7_1364800

Organism
Plasmodium falciparum (isolate 3D7)
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

GO - Molecular functioni

  • DNA binding Source: GeneDB
  • DNA-directed 5'-3' RNA polymerase activity Source: GeneDB

GO - Biological processi

Keywordsi

Molecular functionNucleotidyltransferaseImported, Transferase
Biological processTranscription

Enzyme and pathway databases

ReactomeiR-PFA-113418. Formation of the Early Elongation Complex.
R-PFA-6781823. Formation of TC-NER Pre-Incision Complex.
R-PFA-72086. mRNA Capping.
R-PFA-72165. mRNA Splicing - Minor Pathway.
R-PFA-73776. RNA Polymerase II Promoter Escape.
R-PFA-77075. RNA Pol II CTD phosphorylation and interaction with CE.

Names & Taxonomyi

Protein namesi
Submitted name:
DNA-directed RNA polymerases I, II, and III subunit RPABC1, putativeImported (EC:2.7.7.6Imported)
Gene namesi
ORF Names:PF3D7_1364800Imported
OrganismiPlasmodium falciparum (isolate 3D7)Imported
Taxonomic identifieri36329 [NCBI]
Taxonomic lineageiEukaryotaAlveolataApicomplexaAconoidasidaHaemosporidaPlasmodiidaePlasmodiumPlasmodium (Laverania)
Proteomesi
  • UP000001450 Componenti: Chromosome 13

Organism-specific databases

EuPathDBiPlasmoDB:PF3D7_1364800.

Subcellular locationi

GO - Cellular componenti

Keywords - Cellular componenti

DNA-directed RNA polymeraseImported

Structurei

3D structure databases

ProteinModelPortaliQ8ID59.
SMRiQ8ID59.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini3 – 89RNA_pol_Rpb5_NInterPro annotationAdd BLAST87
Domaini132 – 204RNA_pol_Rpb5_CInterPro annotationAdd BLAST73

Phylogenomic databases

HOGENOMiHOG000205213.
InParanoidiQ8ID59.
KOiK03013.
OMAiNQLMRIQ.
PhylomeDBiQ8ID59.

Family and domain databases

Gene3Di3.40.1340.10. 1 hit.
3.90.940.20. 1 hit.
HAMAPiMF_00025. RNApol_RpoH_RPB5. 1 hit.
InterProiView protein in InterPro
IPR014381. DNA_RNA_pol_RPB5_euk/virus.
IPR005571. RNA_pol_Rpb5_N.
IPR036710. RNA_pol_Rpb5_N_sf.
IPR000783. RNA_pol_subH/Rpb5_C.
IPR035913. RPB5-like.
IPR020609. RpoH/RPB5.
PfamiView protein in Pfam
PF01191. RNA_pol_Rpb5_C. 1 hit.
PF03871. RNA_pol_Rpb5_N. 1 hit.
PIRSFiPIRSF000747. RPB5. 1 hit.
ProDomiView protein in ProDom or Entries sharing at least one domain
PD005155. RNA_pol_subH/Rpb5_C. 1 hit.
SUPFAMiSSF53036. SSF53036. 1 hit.
SSF55287. SSF55287. 1 hit.

Sequencei

Sequence statusi: Complete.

Q8ID59-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MEDPVTRFYK CRKTCCEMLE DRGYIMTPRE KLENFSTFKE MFEDNDRQRS
60 70 80 90 100
KMGISTTHKN DSNNRIIVYF ADEVKKTGVK PLRELTERME EKSIQRAILV
110 120 130 140 150
TQNILTPFAR DAIKEAAPRH IIENFLDTEL LVNITKHELV PRHIPLTSDE
160 170 180 190 200
KKNLLQRYKI MENKLPRIQD VDPVCRYFGL SKGQVVKIIR PSETAGRYVT

YRLVV
Length:205
Mass (Da):24,154
Last modified:March 1, 2003 - v1
Checksum:i25B08D69D4C06085
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AL844509 Genomic DNA. Translation: CAD52768.1.
RefSeqiXP_001350359.1. XM_001350323.1.

Genome annotation databases

EnsemblProtistsiCAD52768; CAD52768; PF3D7_1364800.
GeneDBiPF3D7_1364800.1:pep.
GeneIDi814300.
KEGGipfa:PF13_0341.

Similar proteinsi

Entry informationi

Entry nameiQ8ID59_PLAF7
AccessioniPrimary (citable) accession number: Q8ID59
Entry historyiIntegrated into UniProtKB/TrEMBL: March 1, 2003
Last sequence update: March 1, 2003
Last modified: October 25, 2017
This is version 90 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported