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Protein
Submitted name:

Splicing factor 3B subunit 3, putative

Gene

PF3D7_1234800

Organism
Plasmodium falciparum (isolate 3D7)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

  • mRNA splicing, via spliceosome Source: GO_Central
  • RNA splicing Source: GeneDB
  • RNA splicing, via transesterification reactions Source: GeneDB

Enzyme and pathway databases

ReactomeiR-PFA-72165. mRNA Splicing - Minor Pathway.

Names & Taxonomyi

Protein namesi
Submitted name:
Splicing factor 3B subunit 3, putativeImported
Submitted name:
Splicing factor 3b, subunit 3, 130kD, putativeImported
Gene namesi
ORF Names:PF3D7_1234800Imported, PFL1680wImported
OrganismiPlasmodium falciparum (isolate 3D7)Imported
Taxonomic identifieri36329 [NCBI]
Taxonomic lineageiEukaryotaAlveolataApicomplexaAconoidasidaHaemosporidaPlasmodiidaePlasmodiumPlasmodium (Laverania)
Proteomesi
  • UP000001450 Componenti: Chromosome 12

Organism-specific databases

EuPathDBiPlasmoDB:PF3D7_1234800.

Subcellular locationi

GO - Cellular componenti

  • nucleus Source: GO_Central
  • spliceosomal complex Source: GeneDB

Structurei

3D structure databases

SMRiQ8I574.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini981 – 1296CPSF_AInterPro annotationAdd BLAST316

Coiled coil

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Coiled coili182 – 209Sequence analysisAdd BLAST28

Keywords - Domaini

Coiled coilSequence analysis

Phylogenomic databases

HOGENOMiHOG000216677.
InParanoidiQ8I574.
KOiK12830.
OMAiFACLEID.

Family and domain databases

Gene3Di2.130.10.10. 2 hits.
InterProiView protein in InterPro
IPR004871. Cleavage/polyA-sp_fac_asu_C.
IPR015943. WD40/YVTN_repeat-like_dom_sf.
IPR036322. WD40_repeat_dom_sf.
PfamiView protein in Pfam
PF03178. CPSF_A. 1 hit.
SUPFAMiSSF50978. SSF50978. 2 hits.

Sequencei

Sequence statusi: Complete.

Q8I574-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MPVLYHLTLQ KPTAITKTVY GNFSGPRFHE IIVAKGQVLE LLRSDKQGKL
60 70 80 90 100
NVIISKDIFG IIRSISTFRL TGSNKDYIVI GSDSGRLVIL EYNNEKNDFV
110 120 130 140 150
RVHCETYGKT GIRRIIPGEY IAVDPKGRAL MICAVEKQKF VYILNRDNKE
160 170 180 190 200
NLTISSPLEA HKSHSICHDV VGLNVGFENP MFVSIEQNYE SLDKQINEEL
210 220 230 240 250
ENENDDEDKS DEERKDNNDI INDKNVKDNK DNDFSLDYAK KVLCFWELDL
260 270 280 290 300
GLNHVIKKHI LPIDITAHLL IPLPGGQQGP SGVLICCENF LVYKKVDHED
310 320 330 340 350
IYCAYPRRLE IGQDKNISII CWTMHRIKKF FFILIQSEYG DLYKIEVDHE
360 370 380 390 400
DGIVKEIVCK YFDTVPIGNS ISVLKSGSLF VAAEFGNHYF YQFSGIGDDN
410 420 430 440 450
KQFMCTSNHP LGKNAIIAFK TNKLKNLYLV DQIYSLSPIL DMKIIDAKNT
460 470 480 490 500
HTPQIYTLCG RGPRSSLRIL QHGLSIEELA DNELPGKPKY IWTIKKDNLS
510 520 530 540 550
EYDGYIVVSF EGNTLILEIG ESVEEVSDTL LLNNVTTLHI NILYDNSFIQ
560 570 580 590 600
VYDTGIRHIN GKVVQEWVAP KNKQIKAASS NSSQIVISLS GGELIYFEID
610 620 630 640 650
ESHTLVEIFR KNLNVEVLCL SIQQIPPNRV RANFLAVGCL DNVVRLLSIE
660 670 680 690 700
KDKYFKQLST HLLPNNSSPQ DICISEMNDN GNTMKERNII FLNIGLNTGV
710 720 730 740 750
LLRSIIDPVA GTLSNHYSKY LGAKSIKICP VNVNKNPALL VLCEKTYLCY
760 770 780 790 800
MHQGKFLYSP LNYDMLEYAS SFYSPQCSDG YVAISSNSLR IFRFYRLGEV
810 820 830 840 850
FSQNILHLTF TPRKIVPLPF PSLFYDHDSS LELERKKKIR MLAIIEADHN
860 870 880 890 900
SYDENTQREI QKALKDIKLS DTERRKENDN ENNNIYSNGD VDNIDVNDSA
910 920 930 940 950
NMNEEFNSND NISLAQNHKK DVSYNKEEEQ FTDNNKNDTE NVIETYENNA
960 970 980 990 1000
SLNESNDEEN EDEYYYDRIG TFKAGQGKWG SCIKIINPVN LQILDKISLD
1010 1020 1030 1040 1050
MEEAALSVCA CELEALHCLI VGTTTNLSLK TKSLTSASLR VYTYDIQYKL
1060 1070 1080 1090 1100
NLLHITPIEE QPYCFCSYNG KLIASIGNKL RIYALGKKKL LKKCEYKDIP
1110 1120 1130 1140 1150
EAIVSIKISG NRIFACDIRE SVLIFFYDPN QNTLRLISDD IIPRWITCSE
1160 1170 1180 1190 1200
ILDHHTIMAA DKFDSVFILR VPEEAKQDEY GITNKCWYGG EIMNSSTKNR
1210 1220 1230 1240 1250
KLEHMMSFHI GEIVTSMQKV RLSPTSSECI IYSTIMGTIG AFIPYDNKEE
1260 1270 1280 1290 1300
LELTQHLEII LRTEKPPLCG REHIFFRSYY HPVQNVVDGD LCEQFSSLSY
1310 1320
DAQKKIANDL ERTPEDILRK LEDIRNKIL
Length:1,329
Mass (Da):151,812
Last modified:March 1, 2003 - v1
Checksum:i8981BB86FF545998
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE014188 Genomic DNA. Translation: AAN36422.1.
LN999947 Genomic DNA. Translation: CZT99507.1.
RefSeqiXP_001350742.1. XM_001350706.1.

Genome annotation databases

EnsemblProtistsiCZT99507; CZT99507; PF3D7_1234800.
GeneDBiPF3D7_1234800.1:pep.
GeneIDi811388.
KEGGipfa:PFL1680w.

Similar proteinsi

Entry informationi

Entry nameiQ8I574_PLAF7
AccessioniPrimary (citable) accession number: Q8I574
Entry historyiIntegrated into UniProtKB/TrEMBL: March 1, 2003
Last sequence update: March 1, 2003
Last modified: December 20, 2017
This is version 97 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported