Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein
Submitted name:

DNA repair protein rhp16, putative

Gene

PF3D7_1250800

Organism
Plasmodium falciparum (isolate 3D7)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

  • ATP binding Source: GeneDB
  • ATP-dependent helicase activity Source: GeneDB
  • DNA binding Source: InterPro
  • zinc ion binding Source: InterPro

GO - Biological processi

  • nucleotide-excision repair Source: GeneDB

Names & Taxonomyi

Protein namesi
Submitted name:
DNA repair protein rhp16, putativeImported
Gene namesi
ORF Names:PF3D7_1250800Imported, PFL2440wImported
OrganismiPlasmodium falciparum (isolate 3D7)Imported
Taxonomic identifieri36329 [NCBI]
Taxonomic lineageiEukaryotaAlveolataApicomplexaAconoidasidaHaemosporidaPlasmodiidaePlasmodiumPlasmodium (Laverania)
Proteomesi
  • UP000001450 Componenti: Chromosome 12

Organism-specific databases

EuPathDBiPlasmoDB:PF3D7_1250800.

Subcellular locationi

GO - Cellular componenti

  • nucleotide-excision repair complex Source: GeneDB

Interactioni

Protein-protein interaction databases

IntActiQ8I4S6. 2 interactors.
MINTiMINT-1665888.

Structurei

3D structure databases

SMRiQ8I4S6.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini55 – 103PARP-typeInterPro annotationAdd BLAST49
Domaini999 – 1091Helicase ATP-bindingInterPro annotationAdd BLAST93
Domaini1478 – 1630Helicase C-terminalInterPro annotationAdd BLAST153

Coiled coil

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Coiled coili570 – 597Sequence analysisAdd BLAST28

Keywords - Domaini

Coiled coilSequence analysis

Phylogenomic databases

HOGENOMiHOG000283588.
InParanoidiQ8I4S6.
KOiK15083.
OMAiLHNYAHI.

Family and domain databases

CDDicd00079. HELICc. 1 hit.
Gene3Di3.30.1740.10. 1 hit.
3.30.40.10. 1 hit.
InterProiView protein in InterPro
IPR014001. Helicase_ATP-bd.
IPR001650. Helicase_C.
IPR027417. P-loop_NTPase.
IPR000330. SNF2_N.
IPR001510. Znf_PARP.
IPR036957. Znf_PARP_sf.
IPR001841. Znf_RING.
IPR013083. Znf_RING/FYVE/PHD.
PfamiView protein in Pfam
PF00271. Helicase_C. 1 hit.
PF00176. SNF2_N. 2 hits.
PF13639. zf-RING_2. 1 hit.
SMARTiView protein in SMART
SM00487. DEXDc. 1 hit.
SM00490. HELICc. 1 hit.
SM00184. RING. 1 hit.
SM01336. zf-PARP. 1 hit.
SUPFAMiSSF52540. SSF52540. 6 hits.
PROSITEiView protein in PROSITE
PS51192. HELICASE_ATP_BIND_1. 1 hit.
PS51194. HELICASE_CTER. 1 hit.
PS50064. PARP_ZN_FINGER_2. 1 hit.

Sequencei

Sequence statusi: Complete.

Q8I4S6-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MAKKIDELFS KKERYLKEII ESNCIYVKDL NHWVGTNYIA RLKLKKELLK
60 70 80 90 100
VTPKLLINKT RSRASRCRVC GFSIEKDNLR IGYPTKDPRG DYGYISCWVH
110 120 130 140 150
IECSKKILYS CLYIEENENV LKGYLHEYKN HNCSGEHYNK YEIYIYNNLQ
160 170 180 190 200
WDLFFGGIEN INEEELSKLK EMAKPYEIKN DLKCRNSFEM LINEENEKIN
210 220 230 240 250
SLDYLNVEKK ITNYNLIIPK ELKYDLLQYQ KEGIYWMINQ EMSNVKGGIL
260 270 280 290 300
ADEMGMGKTI QAITLILCQK LNKLKEIKKD ERSDDHDKVG YKNDDEEDEK
310 320 330 340 350
KKKKKKSHML HGDIYKEDIL SFEERDTKHE KSIKEIDIKK SYKNSSSILY
360 370 380 390 400
CKNSTSDDLK VKEESDCSVI LIESDDTQNE KMNHKNDVMA ENKIDTENVL
410 420 430 440 450
NVKKIKNIKK ECVNNKKIKN NNNNNNKSNF KKNDFINKLK GQTLIIAPVA
460 470 480 490 500
AVMQWKSEIE KFVDENILNV YVYHGNSKII SDEELIKYDI VITSYAVVEV
510 520 530 540 550
NFRKIVNKHK QPCEYCGRLY LPNNLDIHKK YFCGPTAVRT EKLKKRKKKN
560 570 580 590 600
KDTALVAMKK FDETFVPTPR NVLLEIMANS KKELEDEKKK NIEISNKSLN
610 620 630 640 650
HNNTKKNKGK KNNQIKQRNA QKDSNIDVIV LSSDSCKEKS SSSENSVYSP
660 670 680 690 700
LSRKTSSRII DLSNLGFDKE TMEQVIESLS EGGKKKKNVK NVKNVNSVKN
710 720 730 740 750
VKSVKNHRDV KWNVVIKNML ENFLYNVDMN DKCKHVLIKI YVTNTTIQNT
760 770 780 790 800
ELEKLNMGEL KVVLITMGKH IFGTKVELIN RILVSAKYIR KELYDENTET
810 820 830 840 850
EEKDTSGVHN EDGDTSMGVT NQKGKDKFCK ERKIKKEDEK SSIEKKRKTV
860 870 880 890 900
DVISVGGDVK RDMSLNKRRN TTNRGTTMKI KGETREYASN KGKNNNDDDN
910 920 930 940 950
NNSYYSDAKS YTSESSDESY QGDICSKKKE PKKNTKSIRR SQRKSYCKSS
960 970 980 990 1000
LESEKKEESD NSYNTNDYND CDDCDDCDDY NNCDDNNYCD DCDDSSNSFD
1010 1020 1030 1040 1050
SYDSIIVRKS KMSKEKKKRE NMKIFDESAL HQIYWNRIIL DEAHRIKNRN
1060 1070 1080 1090 1100
TSTTQSILNL KCCGYRWCLT GTPLQNRISE LYSLIRFIEF YPYAYYFCSK
1110 1120 1130 1140 1150
KDCKCLLLNY EMRDNKYCYF CNHSRINHFN YFNKRILKPI QSFGYRGEGL
1160 1170 1180 1190 1200
SGMSYLKNEV LDKILLRRTK GERKSDINLK PLIIKIRKDK LSKEEKDFYE
1210 1220 1230 1240 1250
SLYKQTSTQF NTYVNSNTVL HNYAHIFDLL SRLRQAADHP YLIIFGNSFL
1260 1270 1280 1290 1300
SDPSGKFIKK NTTIIPAISN DYVCGICLEN VQKRNNISTK CNHNFHKSCL
1310 1320 1330 1340 1350
KQYIESFEME NADQQEEEKE DSNFKNSNMI KYNTYDIGQR EGMNNVKSTN
1360 1370 1380 1390 1400
SCKYDIVIND DIHNNINKLE THENDNLITS KDLLKNKKSL EKKSKSISVV
1410 1420 1430 1440 1450
KFKNKDGYIN LLSNDENVKD YPLGCPVCYI PLTVDFNLLV DKEENEEDEI
1460 1470 1480 1490 1500
IICKEETTYI NKSFINRINT QEYRSSTKIE AVYEEVQNVI NNTDDKCLIF
1510 1520 1530 1540 1550
SQYCSMLDLI EYHLKKHNIV CSKLLGYMSM ISRNNILYNF NQDKQLRVLL
1560 1570 1580 1590 1600
ISLKAGGEGL NLQVANRIFI VDPWWNPAAE LQAIQRAHRI GQTKTVYAIR
1610 1620 1630 1640
FIIENTVEEK IIQLQNKKQL VFDSTIGDSG NAMQKLSKED LAFLFHS
Length:1,647
Mass (Da):192,172
Last modified:March 1, 2003 - v1
Checksum:i0BD7C52008F293AD
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE014852 Genomic DNA. Translation: AAN36572.1.
LN999947 Genomic DNA. Translation: CZT99663.1.
RefSeqiXP_001350892.1. XM_001350856.1.

Genome annotation databases

EnsemblProtistsiCZT99663; CZT99663; PF3D7_1250800.
GeneDBiPF3D7_1250800.1:pep.
GeneIDi811540.
KEGGipfa:PFL2440w.

Similar proteinsi

Entry informationi

Entry nameiQ8I4S6_PLAF7
AccessioniPrimary (citable) accession number: Q8I4S6
Entry historyiIntegrated into UniProtKB/TrEMBL: March 1, 2003
Last sequence update: March 1, 2003
Last modified: October 25, 2017
This is version 102 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported