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Protein
Submitted name:

SLC (SoLute Carrier) homolog

Gene

slc-25a29

Organism
Caenorhabditis elegans
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

GO - Molecular functioni

GO - Biological processi

Keywordsi

Biological processTransportUniRule annotation

Enzyme and pathway databases

ReactomeiR-CEL-352230. Amino acid transport across the plasma membrane.

Names & Taxonomyi

Protein namesi
Submitted name:
SLC (SoLute Carrier) homologImported
Gene namesi
Name:slc-25a29Imported
Synonyms:slc-25A29Imported
ORF Names:C54G10.4Imported, CELE_C54G10.4Imported
OrganismiCaenorhabditis elegansImported
Taxonomic identifieri6239 [NCBI]
Taxonomic lineageiEukaryotaMetazoaEcdysozoaNematodaChromadoreaRhabditidaRhabditoideaRhabditidaePeloderinaeCaenorhabditis
Proteomesi
  • UP000001940 Componenti: Chromosome V

Organism-specific databases

WormBaseiC54G10.4b; CE32337; WBGene00008320; slc-25A29.

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

Keywords - Cellular componenti

Membrane

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Signal peptidei1 – 20Sequence analysisAdd BLAST20
ChainiPRO_500430792621 – 360Sequence analysisAdd BLAST340

Proteomic databases

PaxDbiQ8I4M0.

Expressioni

Gene expression databases

BgeeiWBGene00008320.
ExpressionAtlasiQ8I4M0. baseline and differential.

Interactioni

Protein-protein interaction databases

STRINGi6239.C54G10.4b.1.

Structurei

3D structure databases

ProteinModelPortaliQ8I4M0.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Repeati1 – 88SolcarPROSITE-ProRule annotationAdd BLAST88
Repeati93 – 181SolcarPROSITE-ProRule annotationAdd BLAST89
Repeati191 – 274SolcarPROSITE-ProRule annotationAdd BLAST84

Sequence similaritiesi

Belongs to the mitochondrial carrier (TC 2.A.29) family. [View classification]UniRule annotationSAAS annotation

Keywords - Domaini

SignalSequence analysis, Transmembrane, Transmembrane helixSAAS annotation

Phylogenomic databases

eggNOGiKOG0758. Eukaryota.
ENOG410XS86. LUCA.
GeneTreeiENSGT00700000104295.
HOGENOMiHOG000168307.
InParanoidiQ8I4M0.
OMAiGVCVSIQ.
OrthoDBiEOG091G0HVE.
PhylomeDBiQ8I4M0.

Family and domain databases

Gene3Di1.50.40.10. 1 hit.
InterProiView protein in InterPro
IPR018108. Mitochondrial_sb/sol_carrier.
IPR023395. Mt_carrier_dom_sf.
PfamiView protein in Pfam
PF00153. Mito_carr. 3 hits.
SUPFAMiSSF103506. SSF103506. 1 hit.
PROSITEiView protein in PROSITE
PS50920. SOLCAR. 3 hits.

Sequencei

Sequence statusi: Complete.

Q8I4M0-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSALLDLFAG SLGGAAGVLA GHPLDTVKVR LQTQSGPTPQ YRGTFHCFKL
60 70 80 90 100
IVQKEGFRGL YKGMSSPLLS LSAINAIVFG VHGGTCRQME DPDSITSHFV
110 120 130 140 150
GGCAAGMAQS VIAAPTERIK LLLQIQDDKA HTKFNGPIDA TKQLLRTHGL
160 170 180 190 200
KSLTRGFLAT VARDAPAFGV YFASYEWMAR SMCKDGETST LSSGQLLFAG
210 220 230 240 250
GTAGMLSWLF NYQTDIIKSR FQADNSYKSY MHCIKQTYLE RGYRGFFVGL
260 270 280 290 300
NSALIRAFPS NAATFFTVEW TYRILLDFNV IDNVTKEAEK ICAESQLLPL
310 320 330 340 350
TPTTQPPTRK EQEKTFVTTS QEKCKRLLTQ TDFWATNNHF LLPEAGSTIV
360
DPMLHGYRFF
Length:360
Mass (Da):39,780
Last modified:March 1, 2003 - v1
Checksum:i56DF356162FDECB0
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BX284605 Genomic DNA. Translation: CAD56651.1.
RefSeqiNP_872134.1. NM_182334.3.
UniGeneiCel.8789.

Genome annotation databases

EnsemblMetazoaiC54G10.4b.1; C54G10.4b.1; WBGene00008320.
C54G10.4b.2; C54G10.4b.2; WBGene00008320.
GeneIDi179969.
UCSCiC54G10.4b.1. c. elegans.

Similar proteinsi

Entry informationi

Entry nameiQ8I4M0_CAEEL
AccessioniPrimary (citable) accession number: Q8I4M0
Entry historyiIntegrated into UniProtKB/TrEMBL: March 1, 2003
Last sequence update: March 1, 2003
Last modified: November 22, 2017
This is version 117 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported